Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01385

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01382 and MPMX26_01383 are separated by 188 nucleotidesMPMX26_01383 and MPMX26_01384 are separated by 19 nucleotidesMPMX26_01384 and MPMX26_01385 are separated by 171 nucleotidesMPMX26_01385 and MPMX26_01386 are separated by 2 nucleotidesMPMX26_01386 and MPMX26_01387 overlap by 7 nucleotides MPMX26_01382: MPMX26_01382 - hypothetical protein, at 1,445,476 to 1,445,724 _01382 MPMX26_01383: MPMX26_01383 - hypothetical protein, at 1,445,913 to 1,446,221 _01383 MPMX26_01384: MPMX26_01384 - hypothetical protein, at 1,446,241 to 1,446,480 _01384 MPMX26_01385: MPMX26_01385 - hypothetical protein, at 1,446,652 to 1,448,568 _01385 MPMX26_01386: MPMX26_01386 - hypothetical protein, at 1,448,571 to 1,449,068 _01386 MPMX26_01387: MPMX26_01387 - hypothetical protein, at 1,449,062 to 1,449,682 _01387 Position (kb) 1446 1447 1448 1449Strain fitness (log2 ratio) -1 0 1at 1446.351 kb on - strand, within MPMX26_01384at 1446.361 kb on - strand, within MPMX26_01384at 1447.512 kb on - strand, within MPMX26_01385at 1447.512 kb on - strand, within MPMX26_01385at 1447.528 kb on - strand, within MPMX26_01385at 1448.092 kb on - strand, within MPMX26_01385at 1448.259 kb on - strand, within MPMX26_01385

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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1,446,351 - MPMX26_01384 0.46 -0.2
1,446,361 - MPMX26_01384 0.50 -1.1
1,447,512 - MPMX26_01385 0.45 -0.4
1,447,512 - MPMX26_01385 0.45 +0.2
1,447,528 - MPMX26_01385 0.46 -0.4
1,448,092 - MPMX26_01385 0.75 +0.2
1,448,259 - MPMX26_01385 0.84 +0.2

Or see this region's nucleotide sequence