Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01382 and MPMX26_01383 are separated by 188 nucleotides MPMX26_01383 and MPMX26_01384 are separated by 19 nucleotides MPMX26_01384 and MPMX26_01385 are separated by 171 nucleotides MPMX26_01385 and MPMX26_01386 are separated by 2 nucleotides MPMX26_01386 and MPMX26_01387 overlap by 7 nucleotides
MPMX26_01382: MPMX26_01382 - hypothetical protein, at 1,445,476 to 1,445,724
_01382
MPMX26_01383: MPMX26_01383 - hypothetical protein, at 1,445,913 to 1,446,221
_01383
MPMX26_01384: MPMX26_01384 - hypothetical protein, at 1,446,241 to 1,446,480
_01384
MPMX26_01385: MPMX26_01385 - hypothetical protein, at 1,446,652 to 1,448,568
_01385
MPMX26_01386: MPMX26_01386 - hypothetical protein, at 1,448,571 to 1,449,068
_01386
MPMX26_01387: MPMX26_01387 - hypothetical protein, at 1,449,062 to 1,449,682
_01387
Position (kb)
1446
1447
1448
1449 Strain fitness (log2 ratio)
-1
0
1 at 1446.351 kb on - strand, within MPMX26_01384 at 1446.361 kb on - strand, within MPMX26_01384 at 1447.512 kb on - strand, within MPMX26_01385 at 1447.512 kb on - strand, within MPMX26_01385 at 1447.528 kb on - strand, within MPMX26_01385 at 1448.092 kb on - strand, within MPMX26_01385 at 1448.259 kb on - strand, within MPMX26_01385
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 1,446,351 - MPMX26_01384 0.46 -0.2 1,446,361 - MPMX26_01384 0.50 -1.1 1,447,512 - MPMX26_01385 0.45 -0.4 1,447,512 - MPMX26_01385 0.45 +0.2 1,447,528 - MPMX26_01385 0.46 -0.4 1,448,092 - MPMX26_01385 0.75 +0.2 1,448,259 - MPMX26_01385 0.84 +0.2
Or see this region's nucleotide sequence