Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00958

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00956 and MPMX26_00957 are separated by 9 nucleotidesMPMX26_00957 and MPMX26_00958 are separated by 11 nucleotidesMPMX26_00958 and MPMX26_00959 are separated by 15 nucleotides MPMX26_00956: MPMX26_00956 - hypothetical protein, at 1,004,461 to 1,005,090 _00956 MPMX26_00957: MPMX26_00957 - hypothetical protein, at 1,005,100 to 1,005,909 _00957 MPMX26_00958: MPMX26_00958 - hypothetical protein, at 1,005,921 to 1,007,285 _00958 MPMX26_00959: MPMX26_00959 - hypothetical protein, at 1,007,301 to 1,008,404 _00959 Position (kb) 1005 1006 1007 1008Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1005.168 kb on - strandat 1005.200 kb on - strand, within MPMX26_00957at 1005.279 kb on - strand, within MPMX26_00957at 1005.372 kb on - strand, within MPMX26_00957at 1005.606 kb on - strand, within MPMX26_00957at 1005.615 kb on - strand, within MPMX26_00957at 1005.652 kb on - strand, within MPMX26_00957at 1005.852 kb on - strandat 1005.935 kb on - strandat 1005.957 kb on - strandat 1005.999 kb on - strandat 1006.083 kb on - strand, within MPMX26_00958at 1006.083 kb on - strand, within MPMX26_00958at 1006.124 kb on - strand, within MPMX26_00958at 1006.124 kb on - strand, within MPMX26_00958at 1006.124 kb on - strand, within MPMX26_00958at 1006.155 kb on - strand, within MPMX26_00958at 1006.155 kb on - strand, within MPMX26_00958at 1006.217 kb on - strand, within MPMX26_00958at 1006.217 kb on - strand, within MPMX26_00958at 1006.227 kb on - strand, within MPMX26_00958at 1006.343 kb on - strand, within MPMX26_00958at 1006.491 kb on - strand, within MPMX26_00958at 1006.491 kb on - strand, within MPMX26_00958at 1006.503 kb on - strand, within MPMX26_00958at 1006.520 kb on - strand, within MPMX26_00958at 1006.923 kb on - strand, within MPMX26_00958at 1006.925 kb on - strand, within MPMX26_00958at 1006.995 kb on - strand, within MPMX26_00958at 1007.085 kb on - strand, within MPMX26_00958at 1007.129 kb on - strand, within MPMX26_00958at 1007.129 kb on - strand, within MPMX26_00958at 1007.198 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.345 kb on - strandat 1007.439 kb on - strand, within MPMX26_00959at 1007.556 kb on - strand, within MPMX26_00959at 1007.559 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.630 kb on - strand, within MPMX26_00959at 1007.640 kb on - strand, within MPMX26_00959at 1007.646 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.741 kb on - strand, within MPMX26_00959at 1007.892 kb on - strand, within MPMX26_00959at 1007.901 kb on - strand, within MPMX26_00959at 1007.976 kb on - strand, within MPMX26_00959at 1008.006 kb on - strand, within MPMX26_00959at 1008.242 kb on - strand, within MPMX26_00959

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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1,005,168 - +0.5
1,005,200 - MPMX26_00957 0.12 -0.1
1,005,279 - MPMX26_00957 0.22 +1.0
1,005,372 - MPMX26_00957 0.34 +0.2
1,005,606 - MPMX26_00957 0.62 +0.8
1,005,615 - MPMX26_00957 0.64 +0.0
1,005,652 - MPMX26_00957 0.68 +1.2
1,005,852 - +1.0
1,005,935 - +0.7
1,005,957 - -0.0
1,005,999 - +0.1
1,006,083 - MPMX26_00958 0.12 +1.0
1,006,083 - MPMX26_00958 0.12 -1.4
1,006,124 - MPMX26_00958 0.15 +0.8
1,006,124 - MPMX26_00958 0.15 +0.5
1,006,124 - MPMX26_00958 0.15 +0.2
1,006,155 - MPMX26_00958 0.17 +0.5
1,006,155 - MPMX26_00958 0.17 -1.9
1,006,217 - MPMX26_00958 0.22 +0.4
1,006,217 - MPMX26_00958 0.22 +0.2
1,006,227 - MPMX26_00958 0.22 -2.5
1,006,343 - MPMX26_00958 0.31 -0.6
1,006,491 - MPMX26_00958 0.42 +1.2
1,006,491 - MPMX26_00958 0.42 -0.0
1,006,503 - MPMX26_00958 0.43 -0.0
1,006,520 - MPMX26_00958 0.44 +0.7
1,006,923 - MPMX26_00958 0.73 +1.8
1,006,925 - MPMX26_00958 0.74 -0.5
1,006,995 - MPMX26_00958 0.79 +0.7
1,007,085 - MPMX26_00958 0.85 +0.3
1,007,129 - MPMX26_00958 0.88 +0.7
1,007,129 - MPMX26_00958 0.88 -0.4
1,007,198 - +1.4
1,007,345 - +2.0
1,007,345 - -0.3
1,007,345 - +0.4
1,007,345 - +0.6
1,007,345 - -0.0
1,007,345 - +0.1
1,007,345 - +3.0
1,007,345 - +1.5
1,007,345 - +2.0
1,007,345 - +0.4
1,007,345 - +0.8
1,007,439 - MPMX26_00959 0.12 -0.3
1,007,556 - MPMX26_00959 0.23 -0.4
1,007,559 - MPMX26_00959 0.23 -1.5
1,007,630 - MPMX26_00959 0.30 +0.3
1,007,630 - MPMX26_00959 0.30 -0.6
1,007,630 - MPMX26_00959 0.30 +2.3
1,007,630 - MPMX26_00959 0.30 +0.1
1,007,640 - MPMX26_00959 0.31 -0.5
1,007,646 - MPMX26_00959 0.31 +0.0
1,007,741 - MPMX26_00959 0.40 -0.8
1,007,741 - MPMX26_00959 0.40 -1.4
1,007,892 - MPMX26_00959 0.54 +0.5
1,007,901 - MPMX26_00959 0.54 -1.4
1,007,976 - MPMX26_00959 0.61 +1.2
1,008,006 - MPMX26_00959 0.64 +1.9
1,008,242 - MPMX26_00959 0.85 -0.3

Or see this region's nucleotide sequence