Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00779

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00778 and MPMX26_00779 are separated by 36 nucleotidesMPMX26_00779 and MPMX26_00780 are separated by 230 nucleotides MPMX26_00778: MPMX26_00778 - hypothetical protein, at 821,927 to 822,595 _00778 MPMX26_00779: MPMX26_00779 - hypothetical protein, at 822,632 to 823,060 _00779 MPMX26_00780: MPMX26_00780 - Phosphoenolpyruvate carboxykinase [GTP], at 823,291 to 825,120 _00780 Position (kb) 822 823 824Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 822.022 kb on + strand, within MPMX26_00778at 822.148 kb on + strand, within MPMX26_00778at 822.155 kb on + strand, within MPMX26_00778at 822.155 kb on + strand, within MPMX26_00778at 822.322 kb on + strand, within MPMX26_00778at 822.322 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.358 kb on + strand, within MPMX26_00778at 822.371 kb on - strand, within MPMX26_00778at 822.460 kb on + strand, within MPMX26_00778at 822.532 kb on + strandat 822.532 kb on + strandat 822.532 kb on + strandat 822.649 kb on - strandat 822.649 kb on - strandat 822.663 kb on + strandat 822.671 kb on - strandat 822.682 kb on - strand, within MPMX26_00779at 822.755 kb on - strand, within MPMX26_00779at 822.769 kb on - strand, within MPMX26_00779at 822.779 kb on - strand, within MPMX26_00779at 822.857 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.859 kb on - strand, within MPMX26_00779at 822.902 kb on - strand, within MPMX26_00779at 822.934 kb on - strand, within MPMX26_00779at 822.970 kb on - strand, within MPMX26_00779at 822.970 kb on - strand, within MPMX26_00779at 822.986 kb on - strand, within MPMX26_00779at 823.315 kb on - strandat 823.338 kb on - strandat 823.377 kb on - strandat 823.382 kb on - strandat 823.382 kb on - strandat 823.385 kb on - strandat 823.385 kb on - strandat 823.385 kb on - strandat 823.385 kb on - strandat 823.385 kb on - strandat 823.387 kb on - strandat 823.410 kb on - strandat 823.415 kb on - strandat 823.424 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.460 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.461 kb on - strandat 823.471 kb on - strandat 823.471 kb on - strandat 823.471 kb on - strandat 823.484 kb on - strand, within MPMX26_00780at 823.484 kb on - strand, within MPMX26_00780at 823.484 kb on - strand, within MPMX26_00780at 823.484 kb on - strand, within MPMX26_00780at 823.491 kb on - strand, within MPMX26_00780at 823.491 kb on - strand, within MPMX26_00780at 823.527 kb on - strand, within MPMX26_00780at 823.535 kb on - strand, within MPMX26_00780at 823.535 kb on - strand, within MPMX26_00780at 823.567 kb on - strand, within MPMX26_00780at 823.572 kb on - strand, within MPMX26_00780at 823.577 kb on - strand, within MPMX26_00780at 823.587 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.694 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.725 kb on - strand, within MPMX26_00780at 823.756 kb on - strand, within MPMX26_00780at 823.822 kb on - strand, within MPMX26_00780at 823.822 kb on - strand, within MPMX26_00780at 823.822 kb on - strand, within MPMX26_00780at 823.822 kb on - strand, within MPMX26_00780at 823.822 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.827 kb on - strand, within MPMX26_00780at 823.835 kb on - strand, within MPMX26_00780at 823.835 kb on - strand, within MPMX26_00780at 823.835 kb on - strand, within MPMX26_00780at 823.835 kb on - strand, within MPMX26_00780at 823.835 kb on - strand, within MPMX26_00780at 823.868 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.953 kb on - strand, within MPMX26_00780at 823.970 kb on - strand, within MPMX26_00780at 823.981 kb on - strand, within MPMX26_00780at 824.011 kb on - strand, within MPMX26_00780at 824.016 kb on - strand, within MPMX26_00780at 824.016 kb on - strand, within MPMX26_00780at 824.016 kb on - strand, within MPMX26_00780at 824.016 kb on - strand, within MPMX26_00780at 824.021 kb on - strand, within MPMX26_00780at 824.021 kb on - strand, within MPMX26_00780at 824.032 kb on - strand, within MPMX26_00780at 824.058 kb on - strand, within MPMX26_00780

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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822,022 + MPMX26_00778 0.14 +1.3
822,148 + MPMX26_00778 0.33 +0.5
822,155 + MPMX26_00778 0.34 -0.2
822,155 + MPMX26_00778 0.34 -0.6
822,322 + MPMX26_00778 0.59 +0.4
822,322 + MPMX26_00778 0.59 -0.3
822,358 + MPMX26_00778 0.64 +0.2
822,358 + MPMX26_00778 0.64 -0.3
822,358 + MPMX26_00778 0.64 -0.4
822,358 + MPMX26_00778 0.64 +0.1
822,358 + MPMX26_00778 0.64 -0.0
822,358 + MPMX26_00778 0.64 +1.4
822,358 + MPMX26_00778 0.64 -0.4
822,371 - MPMX26_00778 0.66 +0.6
822,460 + MPMX26_00778 0.80 -0.3
822,532 + +0.4
822,532 + -0.6
822,532 + +0.6
822,649 - -0.2
822,649 - +0.1
822,663 + +0.5
822,671 - +0.4
822,682 - MPMX26_00779 0.12 -0.6
822,755 - MPMX26_00779 0.29 -0.9
822,769 - MPMX26_00779 0.32 +0.0
822,779 - MPMX26_00779 0.34 -0.9
822,857 - MPMX26_00779 0.52 +0.3
822,859 - MPMX26_00779 0.53 +0.7
822,859 - MPMX26_00779 0.53 +0.2
822,859 - MPMX26_00779 0.53 +0.8
822,859 - MPMX26_00779 0.53 -1.5
822,859 - MPMX26_00779 0.53 +1.1
822,859 - MPMX26_00779 0.53 -0.4
822,859 - MPMX26_00779 0.53 -0.1
822,859 - MPMX26_00779 0.53 -0.9
822,859 - MPMX26_00779 0.53 -0.7
822,859 - MPMX26_00779 0.53 -0.3
822,859 - MPMX26_00779 0.53 +0.2
822,859 - MPMX26_00779 0.53 -1.1
822,902 - MPMX26_00779 0.63 -0.3
822,934 - MPMX26_00779 0.70 +0.4
822,970 - MPMX26_00779 0.79 -0.2
822,970 - MPMX26_00779 0.79 -0.0
822,986 - MPMX26_00779 0.83 +0.2
823,315 - +0.1
823,338 - +0.1
823,377 - +0.2
823,382 - -0.4
823,382 - -0.0
823,385 - -0.0
823,385 - -0.3
823,385 - -0.7
823,385 - -0.5
823,385 - +1.2
823,387 - -0.8
823,410 - -0.6
823,415 - -0.5
823,424 - -0.8
823,460 - -0.6
823,460 - -0.5
823,460 - +0.5
823,460 - -0.0
823,460 - -0.5
823,460 - -1.4
823,460 - -1.1
823,461 - -1.5
823,461 - -0.5
823,461 - -1.6
823,461 - -0.4
823,461 - -1.1
823,461 - -1.4
823,461 - -0.1
823,461 - -0.9
823,461 - +0.5
823,461 - -1.2
823,461 - -1.4
823,461 - +0.6
823,461 - +0.5
823,461 - -0.7
823,461 - -2.0
823,461 - -0.4
823,461 - -2.1
823,461 - +0.5
823,461 - +0.5
823,461 - -0.5
823,461 - -0.3
823,461 - -0.4
823,461 - +0.8
823,471 - -2.4
823,471 - +0.6
823,471 - -0.9
823,484 - MPMX26_00780 0.11 -1.7
823,484 - MPMX26_00780 0.11 -0.4
823,484 - MPMX26_00780 0.11 -0.6
823,484 - MPMX26_00780 0.11 -1.0
823,491 - MPMX26_00780 0.11 +0.4
823,491 - MPMX26_00780 0.11 -0.5
823,527 - MPMX26_00780 0.13 -2.1
823,535 - MPMX26_00780 0.13 -1.5
823,535 - MPMX26_00780 0.13 -1.1
823,567 - MPMX26_00780 0.15 -1.7
823,572 - MPMX26_00780 0.15 +0.2
823,577 - MPMX26_00780 0.16 -0.2
823,587 - MPMX26_00780 0.16 -1.2
823,694 - MPMX26_00780 0.22 +0.2
823,694 - MPMX26_00780 0.22 -1.2
823,694 - MPMX26_00780 0.22 -0.3
823,694 - MPMX26_00780 0.22 -0.8
823,694 - MPMX26_00780 0.22 +0.0
823,694 - MPMX26_00780 0.22 +0.4
823,694 - MPMX26_00780 0.22 +0.1
823,694 - MPMX26_00780 0.22 -0.8
823,694 - MPMX26_00780 0.22 -0.6
823,725 - MPMX26_00780 0.24 -0.8
823,725 - MPMX26_00780 0.24 -0.3
823,725 - MPMX26_00780 0.24 -2.7
823,725 - MPMX26_00780 0.24 -1.8
823,725 - MPMX26_00780 0.24 +0.2
823,725 - MPMX26_00780 0.24 +0.2
823,756 - MPMX26_00780 0.25 -0.4
823,822 - MPMX26_00780 0.29 -0.4
823,822 - MPMX26_00780 0.29 -0.1
823,822 - MPMX26_00780 0.29 -0.5
823,822 - MPMX26_00780 0.29 -1.1
823,822 - MPMX26_00780 0.29 -0.6
823,827 - MPMX26_00780 0.29 +0.5
823,827 - MPMX26_00780 0.29 -2.4
823,827 - MPMX26_00780 0.29 -2.4
823,827 - MPMX26_00780 0.29 -1.5
823,827 - MPMX26_00780 0.29 -1.3
823,827 - MPMX26_00780 0.29 -0.5
823,827 - MPMX26_00780 0.29 -0.3
823,835 - MPMX26_00780 0.30 -1.9
823,835 - MPMX26_00780 0.30 -0.2
823,835 - MPMX26_00780 0.30 -1.7
823,835 - MPMX26_00780 0.30 +0.9
823,835 - MPMX26_00780 0.30 -1.5
823,868 - MPMX26_00780 0.32 -1.6
823,953 - MPMX26_00780 0.36 -0.4
823,953 - MPMX26_00780 0.36 -0.9
823,953 - MPMX26_00780 0.36 -1.1
823,953 - MPMX26_00780 0.36 -1.7
823,953 - MPMX26_00780 0.36 -0.5
823,953 - MPMX26_00780 0.36 +2.5
823,970 - MPMX26_00780 0.37 -0.6
823,981 - MPMX26_00780 0.38 -0.6
824,011 - MPMX26_00780 0.39 -2.9
824,016 - MPMX26_00780 0.40 -0.1
824,016 - MPMX26_00780 0.40 -0.9
824,016 - MPMX26_00780 0.40 +0.5
824,016 - MPMX26_00780 0.40 +0.5
824,021 - MPMX26_00780 0.40 -0.4
824,021 - MPMX26_00780 0.40 +0.7
824,032 - MPMX26_00780 0.40 +0.2
824,058 - MPMX26_00780 0.42 -1.0

Or see this region's nucleotide sequence