Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00564 and MPMX26_00565 overlap by 4 nucleotides MPMX26_00565 and MPMX26_00566 are separated by 200 nucleotides MPMX26_00566 and MPMX26_00567 are separated by 429 nucleotides
MPMX26_00564: MPMX26_00564 - Phenylalanine--tRNA ligase beta subunit, at 594,560 to 596,941
_00564
MPMX26_00565: MPMX26_00565 - Integration host factor subunit alpha, at 596,938 to 597,234
_00565
MPMX26_00566: MPMX26_00566 - hypothetical protein, at 597,435 to 597,794
_00566
MPMX26_00567: MPMX26_00567 - Transcription termination factor Rho, at 598,224 to 599,486
_00567
Position (kb) 597
598 Strain fitness (log2 ratio) -1
0
1
2 at 596.934 kb on + strand at 597.263 kb on + strand at 597.481 kb on - strand, within MPMX26_00566 at 597.481 kb on - strand, within MPMX26_00566 at 597.564 kb on - strand, within MPMX26_00566 at 597.800 kb on - strand at 598.209 kb on - strand at 598.215 kb on - strand at 598.216 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.223 kb on - strand at 598.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 596,934 + +0.9 597,263 + +0.1 597,481 - MPMX26_00566 0.13 -0.3 597,481 - MPMX26_00566 0.13 -1.1 597,564 - MPMX26_00566 0.36 -0.9 597,800 - +0.1 598,209 - -0.3 598,215 - -0.1 598,216 - -0.1 598,223 - -0.3 598,223 - -0.4 598,223 - +0.6 598,223 - +0.2 598,223 - -0.3 598,223 - +0.7 598,223 - +0.3 598,223 - +0.9 598,223 - +0.7 598,223 - +0.4 598,223 - +0.5 598,223 - -0.2 598,282 - +1.9
Or see this region's nucleotide sequence