Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00463

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00461 and MPMX26_00462 are separated by 164 nucleotidesMPMX26_00462 and MPMX26_00463 are separated by 211 nucleotidesMPMX26_00463 and MPMX26_00464 are separated by 147 nucleotides MPMX26_00461: MPMX26_00461 - hypothetical protein, at 496,136 to 496,582 _00461 MPMX26_00462: MPMX26_00462 - hypothetical protein, at 496,747 to 497,178 _00462 MPMX26_00463: MPMX26_00463 - hypothetical protein, at 497,390 to 498,121 _00463 MPMX26_00464: MPMX26_00464 - Enoyl-[acyl-carrier-protein] reductase [NADH] FabI, at 498,269 to 499,072 _00464 Position (kb) 497 498 499Strain fitness (log2 ratio) -1 0 1 2 3at 496.428 kb on - strand, within MPMX26_00461at 496.458 kb on - strand, within MPMX26_00461at 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.538 kb on - strandat 496.866 kb on + strand, within MPMX26_00462at 496.884 kb on + strand, within MPMX26_00462at 496.924 kb on + strand, within MPMX26_00462at 496.978 kb on + strand, within MPMX26_00462at 497.069 kb on - strand, within MPMX26_00462at 497.397 kb on + strandat 497.408 kb on + strandat 497.408 kb on + strandat 497.408 kb on + strandat 497.408 kb on + strandat 497.408 kb on + strandat 497.408 kb on + strandat 497.446 kb on + strandat 497.446 kb on + strandat 497.446 kb on + strandat 497.446 kb on + strandat 497.490 kb on + strand, within MPMX26_00463at 497.501 kb on + strand, within MPMX26_00463at 497.511 kb on + strand, within MPMX26_00463at 497.511 kb on + strand, within MPMX26_00463at 497.511 kb on + strand, within MPMX26_00463at 497.532 kb on + strand, within MPMX26_00463at 497.557 kb on + strand, within MPMX26_00463at 497.557 kb on + strand, within MPMX26_00463at 497.565 kb on + strand, within MPMX26_00463at 497.570 kb on + strand, within MPMX26_00463at 497.584 kb on + strand, within MPMX26_00463at 497.584 kb on + strand, within MPMX26_00463at 497.596 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.623 kb on + strand, within MPMX26_00463at 497.634 kb on + strand, within MPMX26_00463at 497.634 kb on + strand, within MPMX26_00463at 497.725 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.726 kb on + strand, within MPMX26_00463at 497.756 kb on + strand, within MPMX26_00463at 497.761 kb on + strand, within MPMX26_00463at 497.761 kb on + strand, within MPMX26_00463at 497.761 kb on + strand, within MPMX26_00463at 497.761 kb on + strand, within MPMX26_00463at 497.761 kb on + strand, within MPMX26_00463at 497.771 kb on + strand, within MPMX26_00463at 497.771 kb on + strand, within MPMX26_00463at 497.771 kb on + strand, within MPMX26_00463at 497.788 kb on + strand, within MPMX26_00463at 497.819 kb on + strand, within MPMX26_00463at 497.819 kb on + strand, within MPMX26_00463at 497.835 kb on + strand, within MPMX26_00463at 497.835 kb on + strand, within MPMX26_00463at 497.845 kb on + strand, within MPMX26_00463at 497.861 kb on + strand, within MPMX26_00463at 497.908 kb on + strand, within MPMX26_00463at 497.908 kb on + strand, within MPMX26_00463at 497.908 kb on + strand, within MPMX26_00463at 497.992 kb on + strand, within MPMX26_00463at 497.992 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.008 kb on + strand, within MPMX26_00463at 498.045 kb on + strand, within MPMX26_00463at 498.050 kb on + strandat 498.058 kb on + strandat 498.058 kb on + strandat 498.062 kb on + strandat 498.062 kb on + strandat 498.106 kb on + strandat 499.045 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
496,428 - MPMX26_00461 0.65 +0.5
496,458 - MPMX26_00461 0.72 +0.8
496,538 - -1.1
496,538 - +0.1
496,538 - -0.6
496,538 - -0.8
496,538 - -0.1
496,538 - +0.4
496,538 - +0.1
496,866 + MPMX26_00462 0.28 +2.5
496,884 + MPMX26_00462 0.32 -0.3
496,924 + MPMX26_00462 0.41 -1.7
496,978 + MPMX26_00462 0.53 -0.3
497,069 - MPMX26_00462 0.75 -1.4
497,397 + -0.4
497,408 + -1.4
497,408 + +0.8
497,408 + -0.5
497,408 + +0.0
497,408 + -0.5
497,408 + -0.9
497,446 + +0.2
497,446 + +0.3
497,446 + -0.1
497,446 + +0.5
497,490 + MPMX26_00463 0.14 +1.7
497,501 + MPMX26_00463 0.15 -0.0
497,511 + MPMX26_00463 0.17 +1.3
497,511 + MPMX26_00463 0.17 +3.1
497,511 + MPMX26_00463 0.17 +0.7
497,532 + MPMX26_00463 0.19 -1.0
497,557 + MPMX26_00463 0.23 -0.3
497,557 + MPMX26_00463 0.23 -0.3
497,565 + MPMX26_00463 0.24 -0.4
497,570 + MPMX26_00463 0.25 +0.4
497,584 + MPMX26_00463 0.27 +1.5
497,584 + MPMX26_00463 0.27 +0.5
497,596 + MPMX26_00463 0.28 +0.8
497,623 + MPMX26_00463 0.32 -0.3
497,623 + MPMX26_00463 0.32 -1.1
497,623 + MPMX26_00463 0.32 +0.4
497,623 + MPMX26_00463 0.32 +0.3
497,623 + MPMX26_00463 0.32 +0.8
497,623 + MPMX26_00463 0.32 +0.3
497,623 + MPMX26_00463 0.32 +0.3
497,623 + MPMX26_00463 0.32 +0.0
497,623 + MPMX26_00463 0.32 +0.0
497,623 + MPMX26_00463 0.32 -0.2
497,634 + MPMX26_00463 0.33 +0.0
497,634 + MPMX26_00463 0.33 +0.2
497,725 + MPMX26_00463 0.46 -1.3
497,726 + MPMX26_00463 0.46 -0.7
497,726 + MPMX26_00463 0.46 -0.1
497,726 + MPMX26_00463 0.46 -0.1
497,726 + MPMX26_00463 0.46 +0.0
497,726 + MPMX26_00463 0.46 +0.4
497,726 + MPMX26_00463 0.46 -0.4
497,726 + MPMX26_00463 0.46 -0.4
497,756 + MPMX26_00463 0.50 -0.7
497,761 + MPMX26_00463 0.51 +2.5
497,761 + MPMX26_00463 0.51 -0.4
497,761 + MPMX26_00463 0.51 +1.5
497,761 + MPMX26_00463 0.51 +0.6
497,761 + MPMX26_00463 0.51 -0.4
497,771 + MPMX26_00463 0.52 -0.1
497,771 + MPMX26_00463 0.52 +0.6
497,771 + MPMX26_00463 0.52 -1.6
497,788 + MPMX26_00463 0.54 +0.6
497,819 + MPMX26_00463 0.59 -0.9
497,819 + MPMX26_00463 0.59 +0.2
497,835 + MPMX26_00463 0.61 +0.3
497,835 + MPMX26_00463 0.61 +0.3
497,845 + MPMX26_00463 0.62 -0.2
497,861 + MPMX26_00463 0.64 +0.1
497,908 + MPMX26_00463 0.71 +1.0
497,908 + MPMX26_00463 0.71 -0.3
497,908 + MPMX26_00463 0.71 +0.5
497,992 + MPMX26_00463 0.82 -0.1
497,992 + MPMX26_00463 0.82 -0.5
498,008 + MPMX26_00463 0.84 -0.2
498,008 + MPMX26_00463 0.84 -0.0
498,008 + MPMX26_00463 0.84 -0.3
498,008 + MPMX26_00463 0.84 +0.7
498,008 + MPMX26_00463 0.84 -0.2
498,008 + MPMX26_00463 0.84 +1.6
498,008 + MPMX26_00463 0.84 -0.0
498,008 + MPMX26_00463 0.84 +0.1
498,008 + MPMX26_00463 0.84 +0.0
498,008 + MPMX26_00463 0.84 +0.6
498,008 + MPMX26_00463 0.84 +0.2
498,045 + MPMX26_00463 0.89 +0.9
498,050 + +0.2
498,058 + -0.1
498,058 + +0.1
498,062 + -0.7
498,062 + -0.0
498,106 + +0.3
499,045 + +0.0

Or see this region's nucleotide sequence