Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00195

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00193 and MPMX26_00194 are separated by 165 nucleotidesMPMX26_00194 and MPMX26_00195 overlap by 1 nucleotidesMPMX26_00195 and MPMX26_00196 are separated by 41 nucleotides MPMX26_00193: MPMX26_00193 - Trans-acting regulatory protein HvrA, at 207,707 to 208,033 _00193 MPMX26_00194: MPMX26_00194 - hypothetical protein, at 208,199 to 208,942 _00194 MPMX26_00195: MPMX26_00195 - hypothetical protein, at 208,942 to 209,784 _00195 MPMX26_00196: MPMX26_00196 - Secretin XcpQ, at 209,826 to 212,081 _00196 Position (kb) 208 209 210Strain fitness (log2 ratio) -2 -1 0 1 2at 207.949 kb on + strand, within MPMX26_00193at 207.949 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.981 kb on + strand, within MPMX26_00193at 207.995 kb on + strand, within MPMX26_00193at 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.058 kb on + strandat 208.199 kb on + strandat 208.265 kb on + strandat 208.283 kb on + strand, within MPMX26_00194at 208.336 kb on + strand, within MPMX26_00194at 208.351 kb on + strand, within MPMX26_00194at 208.351 kb on + strand, within MPMX26_00194at 208.381 kb on + strand, within MPMX26_00194at 208.471 kb on + strand, within MPMX26_00194at 208.474 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.486 kb on + strand, within MPMX26_00194at 208.494 kb on - strand, within MPMX26_00194at 208.528 kb on + strand, within MPMX26_00194at 208.528 kb on + strand, within MPMX26_00194at 208.557 kb on + strand, within MPMX26_00194at 208.557 kb on + strand, within MPMX26_00194at 208.557 kb on + strand, within MPMX26_00194at 208.569 kb on + strand, within MPMX26_00194at 208.584 kb on + strand, within MPMX26_00194at 208.633 kb on + strand, within MPMX26_00194at 208.644 kb on + strand, within MPMX26_00194at 208.657 kb on + strand, within MPMX26_00194at 208.675 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.676 kb on + strand, within MPMX26_00194at 208.678 kb on + strand, within MPMX26_00194at 208.685 kb on + strand, within MPMX26_00194at 208.686 kb on + strand, within MPMX26_00194at 208.686 kb on + strand, within MPMX26_00194at 208.697 kb on + strand, within MPMX26_00194at 208.697 kb on + strand, within MPMX26_00194at 208.697 kb on + strand, within MPMX26_00194at 208.712 kb on + strand, within MPMX26_00194at 208.712 kb on + strand, within MPMX26_00194at 208.719 kb on - strand, within MPMX26_00194at 208.720 kb on - strand, within MPMX26_00194at 208.770 kb on + strand, within MPMX26_00194at 208.770 kb on + strand, within MPMX26_00194at 208.817 kb on + strand, within MPMX26_00194at 208.824 kb on + strand, within MPMX26_00194at 208.876 kb on + strandat 208.876 kb on + strandat 208.889 kb on + strandat 208.889 kb on + strandat 208.922 kb on + strandat 208.922 kb on + strandat 208.984 kb on + strandat 208.989 kb on + strandat 208.989 kb on + strandat 208.994 kb on + strandat 208.994 kb on + strandat 209.023 kb on + strandat 209.050 kb on + strand, within MPMX26_00195at 209.083 kb on + strand, within MPMX26_00195at 209.083 kb on + strand, within MPMX26_00195at 209.091 kb on - strand, within MPMX26_00195at 209.091 kb on - strand, within MPMX26_00195at 209.104 kb on + strand, within MPMX26_00195at 209.106 kb on + strand, within MPMX26_00195at 209.109 kb on + strand, within MPMX26_00195at 209.167 kb on + strand, within MPMX26_00195at 209.167 kb on + strand, within MPMX26_00195at 209.174 kb on + strand, within MPMX26_00195at 209.184 kb on + strand, within MPMX26_00195at 209.207 kb on + strand, within MPMX26_00195at 209.220 kb on + strand, within MPMX26_00195at 209.222 kb on + strand, within MPMX26_00195at 209.226 kb on + strand, within MPMX26_00195at 209.227 kb on + strand, within MPMX26_00195at 209.244 kb on + strand, within MPMX26_00195at 209.262 kb on + strand, within MPMX26_00195at 209.262 kb on + strand, within MPMX26_00195at 209.267 kb on + strand, within MPMX26_00195at 209.274 kb on + strand, within MPMX26_00195at 209.276 kb on + strand, within MPMX26_00195at 209.311 kb on + strand, within MPMX26_00195at 209.337 kb on + strand, within MPMX26_00195at 209.337 kb on + strand, within MPMX26_00195at 209.337 kb on + strand, within MPMX26_00195at 209.337 kb on + strand, within MPMX26_00195at 209.337 kb on + strand, within MPMX26_00195at 209.351 kb on + strand, within MPMX26_00195at 209.362 kb on + strand, within MPMX26_00195at 209.367 kb on + strand, within MPMX26_00195at 209.370 kb on + strand, within MPMX26_00195at 209.413 kb on + strand, within MPMX26_00195at 209.447 kb on + strand, within MPMX26_00195at 209.497 kb on + strand, within MPMX26_00195at 209.497 kb on + strand, within MPMX26_00195at 209.497 kb on + strand, within MPMX26_00195at 209.497 kb on + strand, within MPMX26_00195at 209.497 kb on + strand, within MPMX26_00195at 209.558 kb on + strand, within MPMX26_00195at 209.558 kb on + strand, within MPMX26_00195at 209.562 kb on + strand, within MPMX26_00195at 209.579 kb on + strand, within MPMX26_00195at 209.579 kb on + strand, within MPMX26_00195at 209.587 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.594 kb on + strand, within MPMX26_00195at 209.603 kb on + strand, within MPMX26_00195at 209.608 kb on + strand, within MPMX26_00195at 209.631 kb on + strand, within MPMX26_00195at 209.646 kb on + strand, within MPMX26_00195at 209.646 kb on + strand, within MPMX26_00195at 209.700 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.709 kb on + strandat 209.722 kb on + strandat 209.727 kb on + strandat 209.727 kb on + strandat 209.757 kb on + strandat 209.757 kb on + strandat 209.757 kb on + strandat 209.757 kb on + strandat 209.757 kb on + strandat 209.765 kb on - strandat 209.889 kb on + strandat 209.889 kb on + strandat 209.889 kb on + strandat 209.894 kb on + strandat 209.905 kb on + strandat 209.906 kb on + strandat 209.910 kb on + strandat 209.923 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.938 kb on + strandat 209.945 kb on + strandat 209.952 kb on + strandat 210.001 kb on + strandat 210.001 kb on + strandat 210.008 kb on + strandat 210.016 kb on - strandat 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.071 kb on + strand, within MPMX26_00196at 210.097 kb on + strand, within MPMX26_00196at 210.097 kb on + strand, within MPMX26_00196at 210.124 kb on + strand, within MPMX26_00196at 210.182 kb on + strand, within MPMX26_00196at 210.182 kb on + strand, within MPMX26_00196at 210.185 kb on + strand, within MPMX26_00196at 210.196 kb on + strand, within MPMX26_00196at 210.248 kb on + strand, within MPMX26_00196at 210.290 kb on + strand, within MPMX26_00196at 210.324 kb on + strand, within MPMX26_00196at 210.324 kb on + strand, within MPMX26_00196at 210.369 kb on - strand, within MPMX26_00196at 210.373 kb on + strand, within MPMX26_00196at 210.382 kb on + strand, within MPMX26_00196at 210.382 kb on + strand, within MPMX26_00196at 210.382 kb on + strand, within MPMX26_00196at 210.447 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.449 kb on + strand, within MPMX26_00196at 210.483 kb on + strand, within MPMX26_00196at 210.493 kb on + strand, within MPMX26_00196at 210.518 kb on + strand, within MPMX26_00196at 210.559 kb on + strand, within MPMX26_00196at 210.594 kb on + strand, within MPMX26_00196at 210.594 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.599 kb on + strand, within MPMX26_00196at 210.642 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.654 kb on + strand, within MPMX26_00196at 210.659 kb on + strand, within MPMX26_00196at 210.675 kb on + strand, within MPMX26_00196at 210.682 kb on + strand, within MPMX26_00196at 210.737 kb on + strand, within MPMX26_00196

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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207,949 + MPMX26_00193 0.74 -0.9
207,949 + MPMX26_00193 0.74 -1.2
207,981 + MPMX26_00193 0.84 -0.2
207,981 + MPMX26_00193 0.84 -0.5
207,981 + MPMX26_00193 0.84 +0.2
207,995 + MPMX26_00193 0.88 -0.1
208,058 + -1.2
208,058 + +0.3
208,058 + -0.7
208,058 + -0.9
208,058 + -0.5
208,058 + -0.4
208,199 + -0.6
208,265 + +0.5
208,283 + MPMX26_00194 0.11 +1.3
208,336 + MPMX26_00194 0.18 -0.9
208,351 + MPMX26_00194 0.20 +0.0
208,351 + MPMX26_00194 0.20 -0.2
208,381 + MPMX26_00194 0.24 -0.1
208,471 + MPMX26_00194 0.37 +0.1
208,474 + MPMX26_00194 0.37 +0.2
208,486 + MPMX26_00194 0.39 +0.5
208,486 + MPMX26_00194 0.39 -0.5
208,486 + MPMX26_00194 0.39 +0.7
208,486 + MPMX26_00194 0.39 +0.3
208,486 + MPMX26_00194 0.39 -0.6
208,494 - MPMX26_00194 0.40 +1.5
208,528 + MPMX26_00194 0.44 -0.2
208,528 + MPMX26_00194 0.44 -0.7
208,557 + MPMX26_00194 0.48 -0.3
208,557 + MPMX26_00194 0.48 +0.3
208,557 + MPMX26_00194 0.48 +1.2
208,569 + MPMX26_00194 0.50 -0.2
208,584 + MPMX26_00194 0.52 +1.5
208,633 + MPMX26_00194 0.58 -0.6
208,644 + MPMX26_00194 0.60 -0.2
208,657 + MPMX26_00194 0.62 +0.3
208,675 + MPMX26_00194 0.64 +0.1
208,676 + MPMX26_00194 0.64 -0.7
208,676 + MPMX26_00194 0.64 -0.5
208,676 + MPMX26_00194 0.64 -0.4
208,676 + MPMX26_00194 0.64 -0.2
208,676 + MPMX26_00194 0.64 +1.3
208,676 + MPMX26_00194 0.64 -0.3
208,676 + MPMX26_00194 0.64 +0.0
208,676 + MPMX26_00194 0.64 -0.1
208,676 + MPMX26_00194 0.64 -0.6
208,678 + MPMX26_00194 0.64 -0.2
208,685 + MPMX26_00194 0.65 +0.1
208,686 + MPMX26_00194 0.65 +0.2
208,686 + MPMX26_00194 0.65 -0.3
208,697 + MPMX26_00194 0.67 -0.1
208,697 + MPMX26_00194 0.67 -0.4
208,697 + MPMX26_00194 0.67 -1.6
208,712 + MPMX26_00194 0.69 -0.6
208,712 + MPMX26_00194 0.69 -0.2
208,719 - MPMX26_00194 0.70 -0.6
208,720 - MPMX26_00194 0.70 +0.4
208,770 + MPMX26_00194 0.77 +0.2
208,770 + MPMX26_00194 0.77 -0.1
208,817 + MPMX26_00194 0.83 -0.2
208,824 + MPMX26_00194 0.84 -0.8
208,876 + -0.1
208,876 + -0.3
208,889 + -0.8
208,889 + -0.3
208,922 + +0.1
208,922 + -2.0
208,984 + +0.3
208,989 + -1.2
208,989 + -0.6
208,994 + +1.5
208,994 + +0.9
209,023 + +0.3
209,050 + MPMX26_00195 0.13 +1.5
209,083 + MPMX26_00195 0.17 -0.3
209,083 + MPMX26_00195 0.17 -0.6
209,091 - MPMX26_00195 0.18 -1.8
209,091 - MPMX26_00195 0.18 -1.4
209,104 + MPMX26_00195 0.19 +1.0
209,106 + MPMX26_00195 0.19 -0.9
209,109 + MPMX26_00195 0.20 +0.2
209,167 + MPMX26_00195 0.27 +0.4
209,167 + MPMX26_00195 0.27 -0.6
209,174 + MPMX26_00195 0.28 +1.2
209,184 + MPMX26_00195 0.29 -0.5
209,207 + MPMX26_00195 0.31 +0.1
209,220 + MPMX26_00195 0.33 +1.1
209,222 + MPMX26_00195 0.33 -1.9
209,226 + MPMX26_00195 0.34 +0.6
209,227 + MPMX26_00195 0.34 +0.3
209,244 + MPMX26_00195 0.36 +0.0
209,262 + MPMX26_00195 0.38 +0.6
209,262 + MPMX26_00195 0.38 -0.7
209,267 + MPMX26_00195 0.39 +0.7
209,274 + MPMX26_00195 0.39 +0.5
209,276 + MPMX26_00195 0.40 +0.0
209,311 + MPMX26_00195 0.44 +0.4
209,337 + MPMX26_00195 0.47 +0.3
209,337 + MPMX26_00195 0.47 +1.1
209,337 + MPMX26_00195 0.47 +0.1
209,337 + MPMX26_00195 0.47 +1.2
209,337 + MPMX26_00195 0.47 +0.7
209,351 + MPMX26_00195 0.49 -0.5
209,362 + MPMX26_00195 0.50 +0.2
209,367 + MPMX26_00195 0.50 -0.5
209,370 + MPMX26_00195 0.51 +0.5
209,413 + MPMX26_00195 0.56 +0.0
209,447 + MPMX26_00195 0.60 +0.9
209,497 + MPMX26_00195 0.66 +0.2
209,497 + MPMX26_00195 0.66 -0.1
209,497 + MPMX26_00195 0.66 -0.8
209,497 + MPMX26_00195 0.66 +1.1
209,497 + MPMX26_00195 0.66 +0.7
209,558 + MPMX26_00195 0.73 +0.3
209,558 + MPMX26_00195 0.73 -1.4
209,562 + MPMX26_00195 0.74 -0.1
209,579 + MPMX26_00195 0.76 +0.8
209,579 + MPMX26_00195 0.76 +0.9
209,587 + MPMX26_00195 0.77 +0.5
209,594 + MPMX26_00195 0.77 +0.4
209,594 + MPMX26_00195 0.77 +0.4
209,594 + MPMX26_00195 0.77 +1.0
209,594 + MPMX26_00195 0.77 +0.4
209,594 + MPMX26_00195 0.77 +0.5
209,594 + MPMX26_00195 0.77 +0.3
209,594 + MPMX26_00195 0.77 -0.8
209,603 + MPMX26_00195 0.78 +0.1
209,608 + MPMX26_00195 0.79 +0.3
209,631 + MPMX26_00195 0.82 +0.9
209,646 + MPMX26_00195 0.84 -0.3
209,646 + MPMX26_00195 0.84 +0.6
209,700 + +0.1
209,709 + +0.5
209,709 + -1.5
209,709 + +0.2
209,709 + -0.2
209,709 + +0.2
209,709 + +0.5
209,709 + -0.5
209,709 + -0.0
209,722 + -1.4
209,727 + -2.0
209,727 + -0.4
209,757 + -0.2
209,757 + -0.0
209,757 + -0.1
209,757 + -0.3
209,757 + +0.3
209,765 - +0.9
209,889 + -0.4
209,889 + -0.1
209,889 + +0.5
209,894 + -0.3
209,905 + -0.1
209,906 + -0.2
209,910 + -0.4
209,923 + +1.2
209,938 + +0.2
209,938 + +0.9
209,938 + -0.2
209,938 + -0.2
209,938 + +0.1
209,938 + +2.2
209,938 + +0.8
209,945 + +1.4
209,952 + -0.9
210,001 + +0.9
210,001 + +0.1
210,008 + +0.3
210,016 - +1.2
210,071 + MPMX26_00196 0.11 -0.4
210,071 + MPMX26_00196 0.11 +0.2
210,071 + MPMX26_00196 0.11 -0.4
210,071 + MPMX26_00196 0.11 -0.4
210,071 + MPMX26_00196 0.11 +0.2
210,071 + MPMX26_00196 0.11 +0.4
210,071 + MPMX26_00196 0.11 +0.3
210,071 + MPMX26_00196 0.11 +0.7
210,071 + MPMX26_00196 0.11 -0.1
210,071 + MPMX26_00196 0.11 -0.1
210,071 + MPMX26_00196 0.11 -0.4
210,097 + MPMX26_00196 0.12 -0.8
210,097 + MPMX26_00196 0.12 +0.7
210,124 + MPMX26_00196 0.13 -1.0
210,182 + MPMX26_00196 0.16 -1.7
210,182 + MPMX26_00196 0.16 +0.0
210,185 + MPMX26_00196 0.16 -0.1
210,196 + MPMX26_00196 0.16 +0.7
210,248 + MPMX26_00196 0.19 -0.6
210,290 + MPMX26_00196 0.21 -0.2
210,324 + MPMX26_00196 0.22 +0.3
210,324 + MPMX26_00196 0.22 -0.5
210,369 - MPMX26_00196 0.24 +0.5
210,373 + MPMX26_00196 0.24 +0.7
210,382 + MPMX26_00196 0.25 +1.2
210,382 + MPMX26_00196 0.25 -0.1
210,382 + MPMX26_00196 0.25 -1.8
210,447 + MPMX26_00196 0.28 +0.3
210,449 + MPMX26_00196 0.28 -0.6
210,449 + MPMX26_00196 0.28 -0.8
210,449 + MPMX26_00196 0.28 -0.0
210,449 + MPMX26_00196 0.28 +0.2
210,449 + MPMX26_00196 0.28 +0.4
210,449 + MPMX26_00196 0.28 +0.2
210,483 + MPMX26_00196 0.29 +0.2
210,493 + MPMX26_00196 0.30 -1.0
210,518 + MPMX26_00196 0.31 +0.4
210,559 + MPMX26_00196 0.32 +0.5
210,594 + MPMX26_00196 0.34 -0.7
210,594 + MPMX26_00196 0.34 -0.2
210,599 + MPMX26_00196 0.34 -0.2
210,599 + MPMX26_00196 0.34 -0.5
210,599 + MPMX26_00196 0.34 +0.0
210,599 + MPMX26_00196 0.34 +0.7
210,599 + MPMX26_00196 0.34 +0.1
210,599 + MPMX26_00196 0.34 +0.1
210,599 + MPMX26_00196 0.34 +1.8
210,599 + MPMX26_00196 0.34 +0.3
210,599 + MPMX26_00196 0.34 +1.4
210,599 + MPMX26_00196 0.34 +0.1
210,599 + MPMX26_00196 0.34 -0.2
210,599 + MPMX26_00196 0.34 -0.4
210,642 + MPMX26_00196 0.36 +0.2
210,654 + MPMX26_00196 0.37 +0.1
210,654 + MPMX26_00196 0.37 -0.4
210,654 + MPMX26_00196 0.37 -0.4
210,654 + MPMX26_00196 0.37 -0.1
210,654 + MPMX26_00196 0.37 -0.7
210,654 + MPMX26_00196 0.37 +0.1
210,654 + MPMX26_00196 0.37 -0.4
210,654 + MPMX26_00196 0.37 +0.9
210,654 + MPMX26_00196 0.37 -0.5
210,659 + MPMX26_00196 0.37 +1.8
210,675 + MPMX26_00196 0.38 +0.2
210,682 + MPMX26_00196 0.38 +0.1
210,737 + MPMX26_00196 0.40 +1.0

Or see this region's nucleotide sequence