Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00143

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00141 and MPMX26_00142 are separated by 39 nucleotidesMPMX26_00142 and MPMX26_00143 are separated by 108 nucleotidesMPMX26_00143 and MPMX26_00144 are separated by 118 nucleotidesMPMX26_00144 and MPMX26_00145 are separated by 96 nucleotides MPMX26_00141: MPMX26_00141 - Long-chain-fatty-acid--CoA ligase, at 153,390 to 155,069 _00141 MPMX26_00142: MPMX26_00142 - hypothetical protein, at 155,109 to 155,489 _00142 MPMX26_00143: MPMX26_00143 - hypothetical protein, at 155,598 to 155,996 _00143 MPMX26_00144: MPMX26_00144 - Inorganic pyrophosphatase, at 156,115 to 156,651 _00144 MPMX26_00145: MPMX26_00145 - Porin D, at 156,748 to 158,016 _00145 Position (kb) 155 156Strain fitness (log2 ratio) -1 0 1at 154.636 kb on + strand, within MPMX26_00141at 154.644 kb on - strand, within MPMX26_00141at 154.737 kb on + strand, within MPMX26_00141at 154.742 kb on + strand, within MPMX26_00141at 154.792 kb on + strand, within MPMX26_00141at 154.903 kb on + strandat 154.944 kb on + strandat 154.944 kb on + strandat 154.944 kb on + strandat 154.983 kb on + strandat 155.142 kb on - strandat 155.142 kb on - strandat 155.142 kb on - strandat 155.142 kb on - strandat 155.142 kb on - strandat 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.152 kb on - strand, within MPMX26_00142at 155.159 kb on - strand, within MPMX26_00142at 155.183 kb on - strand, within MPMX26_00142at 155.187 kb on - strand, within MPMX26_00142at 155.187 kb on - strand, within MPMX26_00142at 155.201 kb on - strand, within MPMX26_00142at 155.253 kb on - strand, within MPMX26_00142at 155.253 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.279 kb on - strand, within MPMX26_00142at 155.289 kb on - strand, within MPMX26_00142at 155.319 kb on - strand, within MPMX26_00142at 155.324 kb on - strand, within MPMX26_00142at 155.360 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.374 kb on - strand, within MPMX26_00142at 155.389 kb on + strand, within MPMX26_00142at 155.397 kb on - strand, within MPMX26_00142at 155.397 kb on - strand, within MPMX26_00142at 155.397 kb on - strand, within MPMX26_00142at 155.397 kb on - strand, within MPMX26_00142at 155.397 kb on - strand, within MPMX26_00142at 155.430 kb on - strand, within MPMX26_00142at 155.430 kb on - strand, within MPMX26_00142at 155.454 kb on - strandat 155.487 kb on - strandat 155.605 kb on + strandat 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.732 kb on + strand, within MPMX26_00143at 155.742 kb on + strand, within MPMX26_00143at 155.753 kb on + strand, within MPMX26_00143at 155.758 kb on + strand, within MPMX26_00143at 155.766 kb on + strand, within MPMX26_00143at 155.778 kb on + strand, within MPMX26_00143at 155.808 kb on + strand, within MPMX26_00143at 155.810 kb on + strand, within MPMX26_00143at 155.820 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.822 kb on + strand, within MPMX26_00143at 155.835 kb on + strand, within MPMX26_00143at 155.835 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.842 kb on + strand, within MPMX26_00143at 155.982 kb on + strandat 156.813 kb on - strandat 156.813 kb on - strandat 156.813 kb on - strandat 156.813 kb on - strandat 156.813 kb on - strandat 156.813 kb on - strandat 156.866 kb on - strandat 156.900 kb on - strand, within MPMX26_00145at 156.927 kb on - strand, within MPMX26_00145at 156.959 kb on - strand, within MPMX26_00145

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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154,636 + MPMX26_00141 0.74 +1.0
154,644 - MPMX26_00141 0.75 -0.6
154,737 + MPMX26_00141 0.80 -0.3
154,742 + MPMX26_00141 0.80 -0.4
154,792 + MPMX26_00141 0.83 -0.5
154,903 + +0.1
154,944 + -0.3
154,944 + -1.0
154,944 + +1.5
154,983 + -0.8
155,142 - +0.6
155,142 - +0.6
155,142 - +0.4
155,142 - +0.0
155,142 - -0.2
155,152 - MPMX26_00142 0.11 -0.9
155,152 - MPMX26_00142 0.11 +0.8
155,152 - MPMX26_00142 0.11 +0.0
155,152 - MPMX26_00142 0.11 +0.9
155,152 - MPMX26_00142 0.11 -0.2
155,152 - MPMX26_00142 0.11 +0.3
155,152 - MPMX26_00142 0.11 -0.5
155,159 - MPMX26_00142 0.13 -0.1
155,183 - MPMX26_00142 0.19 +0.8
155,187 - MPMX26_00142 0.20 -0.6
155,187 - MPMX26_00142 0.20 -0.1
155,201 - MPMX26_00142 0.24 -0.7
155,253 - MPMX26_00142 0.38 -0.2
155,253 - MPMX26_00142 0.38 -0.3
155,279 - MPMX26_00142 0.45 +0.5
155,279 - MPMX26_00142 0.45 +0.5
155,279 - MPMX26_00142 0.45 -0.1
155,279 - MPMX26_00142 0.45 -0.2
155,279 - MPMX26_00142 0.45 -0.0
155,279 - MPMX26_00142 0.45 +0.4
155,279 - MPMX26_00142 0.45 -0.1
155,289 - MPMX26_00142 0.47 +0.1
155,319 - MPMX26_00142 0.55 +1.6
155,324 - MPMX26_00142 0.56 -0.8
155,360 - MPMX26_00142 0.66 -0.6
155,374 - MPMX26_00142 0.70 +1.0
155,374 - MPMX26_00142 0.70 +0.6
155,374 - MPMX26_00142 0.70 -0.1
155,374 - MPMX26_00142 0.70 -1.1
155,374 - MPMX26_00142 0.70 +0.1
155,374 - MPMX26_00142 0.70 +0.1
155,374 - MPMX26_00142 0.70 +0.7
155,374 - MPMX26_00142 0.70 -0.3
155,374 - MPMX26_00142 0.70 +0.5
155,374 - MPMX26_00142 0.70 +0.4
155,389 + MPMX26_00142 0.73 -1.0
155,397 - MPMX26_00142 0.76 -0.6
155,397 - MPMX26_00142 0.76 +0.0
155,397 - MPMX26_00142 0.76 -0.3
155,397 - MPMX26_00142 0.76 -0.1
155,397 - MPMX26_00142 0.76 -0.2
155,430 - MPMX26_00142 0.84 -0.1
155,430 - MPMX26_00142 0.84 +0.3
155,454 - -0.2
155,487 - -0.2
155,605 + -1.4
155,732 + MPMX26_00143 0.34 -0.7
155,732 + MPMX26_00143 0.34 +0.1
155,732 + MPMX26_00143 0.34 +0.4
155,732 + MPMX26_00143 0.34 +0.2
155,732 + MPMX26_00143 0.34 -0.9
155,732 + MPMX26_00143 0.34 -1.1
155,732 + MPMX26_00143 0.34 +0.7
155,732 + MPMX26_00143 0.34 -0.1
155,732 + MPMX26_00143 0.34 +0.9
155,732 + MPMX26_00143 0.34 -0.4
155,732 + MPMX26_00143 0.34 +0.5
155,732 + MPMX26_00143 0.34 -0.1
155,732 + MPMX26_00143 0.34 +0.3
155,732 + MPMX26_00143 0.34 -0.7
155,732 + MPMX26_00143 0.34 +0.6
155,732 + MPMX26_00143 0.34 +0.0
155,732 + MPMX26_00143 0.34 -0.3
155,732 + MPMX26_00143 0.34 +0.1
155,742 + MPMX26_00143 0.36 -0.4
155,753 + MPMX26_00143 0.39 +0.5
155,758 + MPMX26_00143 0.40 +1.5
155,766 + MPMX26_00143 0.42 -0.1
155,778 + MPMX26_00143 0.45 -0.5
155,808 + MPMX26_00143 0.53 +0.3
155,810 + MPMX26_00143 0.53 +0.4
155,820 + MPMX26_00143 0.56 +0.3
155,822 + MPMX26_00143 0.56 +0.1
155,822 + MPMX26_00143 0.56 -0.4
155,822 + MPMX26_00143 0.56 +0.2
155,822 + MPMX26_00143 0.56 -0.3
155,822 + MPMX26_00143 0.56 -1.1
155,822 + MPMX26_00143 0.56 +0.0
155,822 + MPMX26_00143 0.56 +0.1
155,822 + MPMX26_00143 0.56 -0.1
155,822 + MPMX26_00143 0.56 -0.1
155,822 + MPMX26_00143 0.56 +0.1
155,822 + MPMX26_00143 0.56 +0.4
155,822 + MPMX26_00143 0.56 +0.8
155,822 + MPMX26_00143 0.56 +0.1
155,822 + MPMX26_00143 0.56 +0.5
155,822 + MPMX26_00143 0.56 +0.1
155,822 + MPMX26_00143 0.56 +0.5
155,822 + MPMX26_00143 0.56 -0.8
155,822 + MPMX26_00143 0.56 -0.5
155,835 + MPMX26_00143 0.59 +0.4
155,835 + MPMX26_00143 0.59 +0.3
155,842 + MPMX26_00143 0.61 +0.5
155,842 + MPMX26_00143 0.61 -1.5
155,842 + MPMX26_00143 0.61 +0.8
155,842 + MPMX26_00143 0.61 +1.1
155,842 + MPMX26_00143 0.61 +0.4
155,842 + MPMX26_00143 0.61 +1.0
155,842 + MPMX26_00143 0.61 -0.1
155,982 + +0.1
156,813 - -1.7
156,813 - +0.2
156,813 - +0.6
156,813 - -0.2
156,813 - +0.2
156,813 - -1.4
156,866 - +0.1
156,900 - MPMX26_00145 0.12 +0.7
156,927 - MPMX26_00145 0.14 -0.5
156,959 - MPMX26_00145 0.17 +0.0

Or see this region's nucleotide sequence