Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00135

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00133 and MPMX26_00134 are separated by 43 nucleotidesMPMX26_00134 and MPMX26_00135 are separated by 84 nucleotidesMPMX26_00135 and MPMX26_00136 overlap by 4 nucleotides MPMX26_00133: MPMX26_00133 - hypothetical protein, at 144,704 to 145,672 _00133 MPMX26_00134: MPMX26_00134 - Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase, at 145,716 to 146,339 _00134 MPMX26_00135: MPMX26_00135 - hypothetical protein, at 146,424 to 146,672 _00135 MPMX26_00136: MPMX26_00136 - hypothetical protein, at 146,669 to 148,270 _00136 Position (kb) 146 147Strain fitness (log2 ratio) -2 -1 0 1at 145.440 kb on + strand, within MPMX26_00133at 145.469 kb on + strand, within MPMX26_00133at 145.479 kb on + strand, within MPMX26_00133at 145.479 kb on + strand, within MPMX26_00133at 145.479 kb on + strand, within MPMX26_00133at 145.502 kb on + strand, within MPMX26_00133at 145.540 kb on + strand, within MPMX26_00133at 145.563 kb on + strand, within MPMX26_00133at 145.568 kb on + strand, within MPMX26_00133at 145.600 kb on + strandat 145.600 kb on + strandat 145.609 kb on + strandat 145.609 kb on + strandat 145.610 kb on + strandat 145.624 kb on + strandat 145.632 kb on + strandat 145.634 kb on + strandat 145.726 kb on - strandat 145.738 kb on - strandat 145.738 kb on - strandat 145.738 kb on - strandat 145.738 kb on - strandat 145.738 kb on - strandat 145.743 kb on - strandat 145.746 kb on - strandat 145.748 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.776 kb on - strandat 145.785 kb on - strand, within MPMX26_00134at 145.795 kb on - strand, within MPMX26_00134at 145.811 kb on - strand, within MPMX26_00134at 145.811 kb on - strand, within MPMX26_00134at 145.811 kb on - strand, within MPMX26_00134at 145.811 kb on - strand, within MPMX26_00134at 145.811 kb on - strand, within MPMX26_00134at 145.822 kb on - strand, within MPMX26_00134at 145.832 kb on - strand, within MPMX26_00134at 145.832 kb on - strand, within MPMX26_00134at 145.842 kb on - strand, within MPMX26_00134at 145.859 kb on - strand, within MPMX26_00134at 145.924 kb on - strand, within MPMX26_00134at 145.940 kb on - strand, within MPMX26_00134at 145.943 kb on + strand, within MPMX26_00134at 145.951 kb on - strand, within MPMX26_00134at 145.968 kb on - strand, within MPMX26_00134at 145.971 kb on - strand, within MPMX26_00134at 145.999 kb on - strand, within MPMX26_00134at 146.037 kb on - strand, within MPMX26_00134at 146.042 kb on - strand, within MPMX26_00134at 146.042 kb on - strand, within MPMX26_00134at 146.042 kb on - strand, within MPMX26_00134at 146.052 kb on - strand, within MPMX26_00134at 146.141 kb on - strand, within MPMX26_00134at 146.145 kb on - strand, within MPMX26_00134at 146.155 kb on - strand, within MPMX26_00134at 146.171 kb on - strand, within MPMX26_00134at 146.171 kb on - strand, within MPMX26_00134at 146.197 kb on - strand, within MPMX26_00134at 146.267 kb on - strand, within MPMX26_00134at 146.277 kb on - strandat 146.282 kb on - strandat 146.287 kb on - strandat 146.299 kb on - strandat 146.304 kb on - strandat 146.304 kb on - strandat 146.543 kb on + strand, within MPMX26_00135at 146.553 kb on + strand, within MPMX26_00135at 146.685 kb on + strandat 146.686 kb on + strandat 146.703 kb on + strandat 146.708 kb on + strandat 146.708 kb on + strandat 146.712 kb on + strandat 146.743 kb on + strandat 146.800 kb on + strandat 146.800 kb on + strandat 146.800 kb on + strandat 146.822 kb on + strandat 146.827 kb on + strandat 146.827 kb on + strandat 146.827 kb on + strandat 146.883 kb on + strand, within MPMX26_00136at 146.883 kb on + strand, within MPMX26_00136at 146.947 kb on - strand, within MPMX26_00136at 146.960 kb on + strand, within MPMX26_00136at 146.960 kb on + strand, within MPMX26_00136at 146.960 kb on + strand, within MPMX26_00136at 146.979 kb on + strand, within MPMX26_00136at 146.979 kb on + strand, within MPMX26_00136at 146.979 kb on + strand, within MPMX26_00136at 146.979 kb on + strand, within MPMX26_00136at 146.979 kb on + strand, within MPMX26_00136at 146.998 kb on + strand, within MPMX26_00136at 147.009 kb on + strand, within MPMX26_00136at 147.069 kb on + strand, within MPMX26_00136at 147.071 kb on + strand, within MPMX26_00136at 147.071 kb on + strand, within MPMX26_00136at 147.076 kb on + strand, within MPMX26_00136at 147.106 kb on + strand, within MPMX26_00136at 147.113 kb on + strand, within MPMX26_00136at 147.125 kb on + strand, within MPMX26_00136at 147.145 kb on + strand, within MPMX26_00136at 147.149 kb on + strand, within MPMX26_00136at 147.157 kb on + strand, within MPMX26_00136at 147.229 kb on + strand, within MPMX26_00136at 147.238 kb on + strand, within MPMX26_00136at 147.240 kb on + strand, within MPMX26_00136at 147.278 kb on + strand, within MPMX26_00136at 147.341 kb on - strand, within MPMX26_00136at 147.425 kb on + strand, within MPMX26_00136at 147.428 kb on + strand, within MPMX26_00136at 147.476 kb on + strand, within MPMX26_00136at 147.476 kb on + strand, within MPMX26_00136at 147.545 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.548 kb on + strand, within MPMX26_00136at 147.550 kb on + strand, within MPMX26_00136at 147.556 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.558 kb on + strand, within MPMX26_00136at 147.566 kb on + strand, within MPMX26_00136at 147.576 kb on + strand, within MPMX26_00136at 147.576 kb on + strand, within MPMX26_00136at 147.576 kb on + strand, within MPMX26_00136at 147.588 kb on + strand, within MPMX26_00136at 147.605 kb on + strand, within MPMX26_00136at 147.613 kb on + strand, within MPMX26_00136at 147.621 kb on + strand, within MPMX26_00136at 147.641 kb on + strand, within MPMX26_00136

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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145,440 + MPMX26_00133 0.76 -0.9
145,469 + MPMX26_00133 0.79 -0.3
145,479 + MPMX26_00133 0.80 +0.0
145,479 + MPMX26_00133 0.80 +0.3
145,479 + MPMX26_00133 0.80 -0.2
145,502 + MPMX26_00133 0.82 +0.7
145,540 + MPMX26_00133 0.86 -0.3
145,563 + MPMX26_00133 0.89 +0.3
145,568 + MPMX26_00133 0.89 +0.4
145,600 + +0.6
145,600 + +0.5
145,609 + -0.5
145,609 + +0.1
145,610 + -0.2
145,624 + -0.2
145,632 + -0.1
145,634 + -0.6
145,726 - -0.0
145,738 - -0.0
145,738 - -0.8
145,738 - -0.5
145,738 - -0.5
145,738 - +0.4
145,743 - +0.2
145,746 - +0.0
145,748 - +0.3
145,776 - +0.1
145,776 - +0.1
145,776 - -0.6
145,776 - +0.6
145,776 - +0.2
145,776 - +0.2
145,776 - -0.7
145,776 - -0.7
145,785 - MPMX26_00134 0.11 +0.9
145,795 - MPMX26_00134 0.13 -0.1
145,811 - MPMX26_00134 0.15 +0.6
145,811 - MPMX26_00134 0.15 -1.1
145,811 - MPMX26_00134 0.15 +0.4
145,811 - MPMX26_00134 0.15 -0.5
145,811 - MPMX26_00134 0.15 +0.4
145,822 - MPMX26_00134 0.17 -0.0
145,832 - MPMX26_00134 0.19 -0.5
145,832 - MPMX26_00134 0.19 -0.3
145,842 - MPMX26_00134 0.20 -0.1
145,859 - MPMX26_00134 0.23 +0.6
145,924 - MPMX26_00134 0.33 +0.3
145,940 - MPMX26_00134 0.36 +0.1
145,943 + MPMX26_00134 0.36 -0.1
145,951 - MPMX26_00134 0.38 -0.2
145,968 - MPMX26_00134 0.40 +0.2
145,971 - MPMX26_00134 0.41 -0.1
145,999 - MPMX26_00134 0.45 +1.5
146,037 - MPMX26_00134 0.51 +0.2
146,042 - MPMX26_00134 0.52 +0.8
146,042 - MPMX26_00134 0.52 -0.0
146,042 - MPMX26_00134 0.52 +0.4
146,052 - MPMX26_00134 0.54 +0.1
146,141 - MPMX26_00134 0.68 -0.0
146,145 - MPMX26_00134 0.69 -0.7
146,155 - MPMX26_00134 0.70 -0.6
146,171 - MPMX26_00134 0.73 +0.3
146,171 - MPMX26_00134 0.73 -0.1
146,197 - MPMX26_00134 0.77 +0.5
146,267 - MPMX26_00134 0.88 -1.2
146,277 - -0.2
146,282 - +0.3
146,287 - +0.9
146,299 - +0.1
146,304 - -0.9
146,304 - +0.2
146,543 + MPMX26_00135 0.48 -0.4
146,553 + MPMX26_00135 0.52 +0.5
146,685 + +0.2
146,686 + +0.1
146,703 + +0.6
146,708 + +0.6
146,708 + +1.0
146,712 + -0.6
146,743 + +0.7
146,800 + +0.6
146,800 + -0.5
146,800 + +0.7
146,822 + -0.9
146,827 + -0.7
146,827 + -0.6
146,827 + +0.0
146,883 + MPMX26_00136 0.13 -0.4
146,883 + MPMX26_00136 0.13 -0.1
146,947 - MPMX26_00136 0.17 -0.3
146,960 + MPMX26_00136 0.18 -0.3
146,960 + MPMX26_00136 0.18 -0.0
146,960 + MPMX26_00136 0.18 -0.4
146,979 + MPMX26_00136 0.19 -0.7
146,979 + MPMX26_00136 0.19 +0.1
146,979 + MPMX26_00136 0.19 -0.1
146,979 + MPMX26_00136 0.19 -0.1
146,979 + MPMX26_00136 0.19 -0.9
146,998 + MPMX26_00136 0.21 -0.5
147,009 + MPMX26_00136 0.21 -1.5
147,069 + MPMX26_00136 0.25 +0.3
147,071 + MPMX26_00136 0.25 -0.1
147,071 + MPMX26_00136 0.25 +0.0
147,076 + MPMX26_00136 0.25 +0.4
147,106 + MPMX26_00136 0.27 -0.4
147,113 + MPMX26_00136 0.28 +0.3
147,125 + MPMX26_00136 0.28 -0.3
147,145 + MPMX26_00136 0.30 -0.5
147,149 + MPMX26_00136 0.30 +0.1
147,157 + MPMX26_00136 0.30 +0.0
147,229 + MPMX26_00136 0.35 +0.4
147,238 + MPMX26_00136 0.36 -0.1
147,240 + MPMX26_00136 0.36 +0.3
147,278 + MPMX26_00136 0.38 +0.2
147,341 - MPMX26_00136 0.42 +0.4
147,425 + MPMX26_00136 0.47 -0.2
147,428 + MPMX26_00136 0.47 +0.7
147,476 + MPMX26_00136 0.50 +0.0
147,476 + MPMX26_00136 0.50 +0.1
147,545 + MPMX26_00136 0.55 -0.2
147,548 + MPMX26_00136 0.55 -0.5
147,548 + MPMX26_00136 0.55 +0.2
147,548 + MPMX26_00136 0.55 -0.0
147,548 + MPMX26_00136 0.55 -0.1
147,548 + MPMX26_00136 0.55 -0.6
147,548 + MPMX26_00136 0.55 -0.1
147,548 + MPMX26_00136 0.55 +0.1
147,548 + MPMX26_00136 0.55 +0.1
147,548 + MPMX26_00136 0.55 -0.5
147,550 + MPMX26_00136 0.55 -0.2
147,556 + MPMX26_00136 0.55 +0.0
147,558 + MPMX26_00136 0.55 -1.0
147,558 + MPMX26_00136 0.55 -0.4
147,558 + MPMX26_00136 0.55 +0.5
147,558 + MPMX26_00136 0.55 -1.9
147,558 + MPMX26_00136 0.55 +0.3
147,558 + MPMX26_00136 0.55 -0.0
147,558 + MPMX26_00136 0.55 +0.9
147,558 + MPMX26_00136 0.55 -0.5
147,558 + MPMX26_00136 0.55 +0.0
147,566 + MPMX26_00136 0.56 +0.3
147,576 + MPMX26_00136 0.57 -0.7
147,576 + MPMX26_00136 0.57 -0.7
147,576 + MPMX26_00136 0.57 +0.5
147,588 + MPMX26_00136 0.57 -0.8
147,605 + MPMX26_00136 0.58 -0.2
147,613 + MPMX26_00136 0.59 -0.2
147,621 + MPMX26_00136 0.59 +0.1
147,641 + MPMX26_00136 0.61 -1.9

Or see this region's nucleotide sequence