Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00039

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00038 and MPMX26_00039 are separated by 32 nucleotidesMPMX26_00039 and MPMX26_00040 are separated by 69 nucleotides MPMX26_00038: MPMX26_00038 - NADPH oxidoreductase, at 39,770 to 40,789 _00038 MPMX26_00039: MPMX26_00039 - NADPH-dependent stearoyl-CoA 9-desaturase, at 40,822 to 41,994 _00039 MPMX26_00040: MPMX26_00040 - Ribonuclease PH, at 42,064 to 42,780 _00040 Position (kb) 40 41 42Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 39.838 kb on + strandat 39.845 kb on - strandat 39.885 kb on + strand, within MPMX26_00038at 39.886 kb on + strand, within MPMX26_00038at 39.886 kb on + strand, within MPMX26_00038at 39.940 kb on + strand, within MPMX26_00038at 39.950 kb on + strand, within MPMX26_00038at 39.963 kb on - strand, within MPMX26_00038at 39.999 kb on + strand, within MPMX26_00038at 40.004 kb on + strand, within MPMX26_00038at 40.059 kb on + strand, within MPMX26_00038at 40.059 kb on + strand, within MPMX26_00038at 40.067 kb on + strand, within MPMX26_00038at 40.138 kb on + strand, within MPMX26_00038at 40.140 kb on - strand, within MPMX26_00038at 40.152 kb on - strand, within MPMX26_00038at 40.250 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.286 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.291 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.323 kb on - strand, within MPMX26_00038at 40.335 kb on - strand, within MPMX26_00038at 40.375 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.392 kb on - strand, within MPMX26_00038at 40.465 kb on - strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038at 40.595 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.605 kb on + strand, within MPMX26_00038at 40.613 kb on - strand, within MPMX26_00038at 40.613 kb on - strand, within MPMX26_00038at 40.628 kb on - strand, within MPMX26_00038at 40.636 kb on - strand, within MPMX26_00038at 40.646 kb on - strand, within MPMX26_00038at 40.669 kb on - strand, within MPMX26_00038at 40.669 kb on - strand, within MPMX26_00038at 40.670 kb on - strand, within MPMX26_00038at 40.679 kb on - strand, within MPMX26_00038at 40.679 kb on - strand, within MPMX26_00038at 40.749 kb on + strandat 40.763 kb on - strandat 40.763 kb on - strandat 40.924 kb on + strandat 40.924 kb on + strandat 40.924 kb on + strandat 41.035 kb on + strand, within MPMX26_00039at 41.035 kb on + strand, within MPMX26_00039at 41.050 kb on + strand, within MPMX26_00039at 41.067 kb on - strand, within MPMX26_00039at 41.100 kb on + strand, within MPMX26_00039at 41.134 kb on - strand, within MPMX26_00039at 41.221 kb on + strand, within MPMX26_00039at 41.223 kb on + strand, within MPMX26_00039at 41.239 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.361 kb on + strand, within MPMX26_00039at 41.488 kb on + strand, within MPMX26_00039at 41.504 kb on + strand, within MPMX26_00039at 41.564 kb on + strand, within MPMX26_00039at 41.566 kb on + strand, within MPMX26_00039at 41.568 kb on + strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.574 kb on - strand, within MPMX26_00039at 41.702 kb on + strand, within MPMX26_00039at 41.707 kb on + strand, within MPMX26_00039at 41.707 kb on + strand, within MPMX26_00039at 41.778 kb on + strand, within MPMX26_00039at 41.816 kb on + strand, within MPMX26_00039at 41.816 kb on + strand, within MPMX26_00039at 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.922 kb on + strandat 41.947 kb on + strandat 41.947 kb on + strandat 42.018 kb on + strandat 42.018 kb on + strandat 42.018 kb on + strandat 42.049 kb on + strandat 42.068 kb on + strandat 42.083 kb on + strandat 42.083 kb on + strandat 42.117 kb on + strandat 42.127 kb on + strandat 42.133 kb on + strandat 42.138 kb on + strand, within MPMX26_00040at 42.140 kb on + strand, within MPMX26_00040at 42.150 kb on + strand, within MPMX26_00040at 42.156 kb on + strand, within MPMX26_00040at 42.165 kb on + strand, within MPMX26_00040at 42.169 kb on + strand, within MPMX26_00040at 42.172 kb on + strand, within MPMX26_00040at 42.174 kb on + strand, within MPMX26_00040at 42.177 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.220 kb on + strand, within MPMX26_00040at 42.221 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.226 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.231 kb on + strand, within MPMX26_00040at 42.236 kb on + strand, within MPMX26_00040at 42.242 kb on + strand, within MPMX26_00040at 42.242 kb on + strand, within MPMX26_00040at 42.244 kb on + strand, within MPMX26_00040at 42.244 kb on + strand, within MPMX26_00040at 42.256 kb on + strand, within MPMX26_00040at 42.266 kb on + strand, within MPMX26_00040at 42.269 kb on + strand, within MPMX26_00040at 42.271 kb on + strand, within MPMX26_00040at 42.288 kb on + strand, within MPMX26_00040at 42.312 kb on + strand, within MPMX26_00040at 42.346 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.347 kb on + strand, within MPMX26_00040at 42.407 kb on + strand, within MPMX26_00040at 42.407 kb on + strand, within MPMX26_00040at 42.415 kb on + strand, within MPMX26_00040at 42.417 kb on + strand, within MPMX26_00040at 42.417 kb on + strand, within MPMX26_00040at 42.438 kb on + strand, within MPMX26_00040at 42.443 kb on + strand, within MPMX26_00040at 42.464 kb on + strand, within MPMX26_00040at 42.464 kb on + strand, within MPMX26_00040at 42.474 kb on + strand, within MPMX26_00040at 42.474 kb on + strand, within MPMX26_00040at 42.573 kb on + strand, within MPMX26_00040at 42.574 kb on + strand, within MPMX26_00040at 42.578 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.609 kb on + strand, within MPMX26_00040at 42.621 kb on + strand, within MPMX26_00040at 42.626 kb on + strand, within MPMX26_00040at 42.630 kb on + strand, within MPMX26_00040at 42.636 kb on + strand, within MPMX26_00040at 42.661 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.671 kb on + strand, within MPMX26_00040at 42.673 kb on + strand, within MPMX26_00040at 42.678 kb on + strand, within MPMX26_00040at 42.684 kb on + strand, within MPMX26_00040at 42.696 kb on + strand, within MPMX26_00040at 42.696 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.702 kb on + strand, within MPMX26_00040at 42.714 kb on + strandat 42.747 kb on + strandat 42.757 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.766 kb on + strandat 42.771 kb on + strandat 42.805 kb on + strandat 42.900 kb on + strandat 42.992 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
39,838 + -0.3
39,845 - -0.4
39,885 + MPMX26_00038 0.11 +0.3
39,886 + MPMX26_00038 0.11 -0.5
39,886 + MPMX26_00038 0.11 +0.4
39,940 + MPMX26_00038 0.17 -0.1
39,950 + MPMX26_00038 0.18 +0.9
39,963 - MPMX26_00038 0.19 +0.5
39,999 + MPMX26_00038 0.22 +0.7
40,004 + MPMX26_00038 0.23 -1.3
40,059 + MPMX26_00038 0.28 +0.4
40,059 + MPMX26_00038 0.28 +0.2
40,067 + MPMX26_00038 0.29 +0.5
40,138 + MPMX26_00038 0.36 +0.0
40,140 - MPMX26_00038 0.36 -0.7
40,152 - MPMX26_00038 0.37 -0.7
40,250 - MPMX26_00038 0.47 +0.9
40,286 - MPMX26_00038 0.51 -0.0
40,286 - MPMX26_00038 0.51 -0.4
40,286 - MPMX26_00038 0.51 +0.0
40,291 - MPMX26_00038 0.51 +0.5
40,291 - MPMX26_00038 0.51 +1.3
40,291 - MPMX26_00038 0.51 -1.2
40,291 - MPMX26_00038 0.51 +0.2
40,291 - MPMX26_00038 0.51 +0.2
40,291 - MPMX26_00038 0.51 +1.1
40,291 - MPMX26_00038 0.51 +1.5
40,291 - MPMX26_00038 0.51 +0.7
40,323 - MPMX26_00038 0.54 +0.5
40,323 - MPMX26_00038 0.54 -0.1
40,323 - MPMX26_00038 0.54 -0.5
40,335 - MPMX26_00038 0.55 +0.8
40,375 - MPMX26_00038 0.59 +0.2
40,392 - MPMX26_00038 0.61 -0.3
40,392 - MPMX26_00038 0.61 -0.2
40,392 - MPMX26_00038 0.61 +1.9
40,465 - MPMX26_00038 0.68 +0.7
40,595 + MPMX26_00038 0.81 +0.4
40,595 + MPMX26_00038 0.81 +0.6
40,595 + MPMX26_00038 0.81 -0.0
40,605 + MPMX26_00038 0.82 +1.5
40,605 + MPMX26_00038 0.82 +1.2
40,605 + MPMX26_00038 0.82 +2.8
40,605 + MPMX26_00038 0.82 -0.6
40,605 + MPMX26_00038 0.82 +0.1
40,605 + MPMX26_00038 0.82 -1.1
40,605 + MPMX26_00038 0.82 +1.8
40,605 + MPMX26_00038 0.82 +0.5
40,605 + MPMX26_00038 0.82 +0.1
40,605 + MPMX26_00038 0.82 -0.8
40,605 + MPMX26_00038 0.82 +1.3
40,605 + MPMX26_00038 0.82 -0.7
40,605 + MPMX26_00038 0.82 +0.9
40,605 + MPMX26_00038 0.82 +0.2
40,605 + MPMX26_00038 0.82 +0.2
40,605 + MPMX26_00038 0.82 -0.4
40,605 + MPMX26_00038 0.82 +0.6
40,605 + MPMX26_00038 0.82 -1.6
40,605 + MPMX26_00038 0.82 -0.4
40,605 + MPMX26_00038 0.82 -0.9
40,613 - MPMX26_00038 0.83 +0.2
40,613 - MPMX26_00038 0.83 +0.2
40,628 - MPMX26_00038 0.84 +0.9
40,636 - MPMX26_00038 0.85 +1.5
40,646 - MPMX26_00038 0.86 -0.8
40,669 - MPMX26_00038 0.88 +2.5
40,669 - MPMX26_00038 0.88 +1.5
40,670 - MPMX26_00038 0.88 +1.5
40,679 - MPMX26_00038 0.89 +0.9
40,679 - MPMX26_00038 0.89 +0.2
40,749 + +0.9
40,763 - -1.2
40,763 - +0.5
40,924 + -0.6
40,924 + +0.6
40,924 + -1.6
41,035 + MPMX26_00039 0.18 -1.9
41,035 + MPMX26_00039 0.18 -1.5
41,050 + MPMX26_00039 0.19 +0.1
41,067 - MPMX26_00039 0.21 +1.9
41,100 + MPMX26_00039 0.24 -2.2
41,134 - MPMX26_00039 0.27 +0.5
41,221 + MPMX26_00039 0.34 +0.2
41,223 + MPMX26_00039 0.34 -0.6
41,239 + MPMX26_00039 0.36 +0.2
41,361 + MPMX26_00039 0.46 +1.8
41,361 + MPMX26_00039 0.46 +0.2
41,361 + MPMX26_00039 0.46 -0.1
41,488 + MPMX26_00039 0.57 +0.5
41,504 + MPMX26_00039 0.58 -0.8
41,564 + MPMX26_00039 0.63 -0.1
41,566 + MPMX26_00039 0.63 +0.4
41,568 + MPMX26_00039 0.64 -0.6
41,574 - MPMX26_00039 0.64 +0.6
41,574 - MPMX26_00039 0.64 +1.5
41,574 - MPMX26_00039 0.64 -1.4
41,574 - MPMX26_00039 0.64 +0.8
41,702 + MPMX26_00039 0.75 +0.4
41,707 + MPMX26_00039 0.75 -0.3
41,707 + MPMX26_00039 0.75 -0.3
41,778 + MPMX26_00039 0.82 +1.1
41,816 + MPMX26_00039 0.85 +0.6
41,816 + MPMX26_00039 0.85 +0.0
41,922 + -0.3
41,922 + +0.4
41,922 + +1.1
41,922 + +0.6
41,922 + +1.4
41,947 + -0.9
41,947 + +0.3
42,018 + +0.6
42,018 + -0.2
42,018 + +1.5
42,049 + +0.1
42,068 + +0.1
42,083 + +0.5
42,083 + -1.7
42,117 + -1.3
42,127 + -0.9
42,133 + -1.1
42,138 + MPMX26_00040 0.10 +0.2
42,140 + MPMX26_00040 0.11 -2.0
42,150 + MPMX26_00040 0.12 -2.6
42,156 + MPMX26_00040 0.13 -0.7
42,165 + MPMX26_00040 0.14 -2.1
42,169 + MPMX26_00040 0.15 -0.8
42,172 + MPMX26_00040 0.15 -0.1
42,174 + MPMX26_00040 0.15 -2.3
42,177 + MPMX26_00040 0.16 -2.1
42,220 + MPMX26_00040 0.22 +0.2
42,220 + MPMX26_00040 0.22 -1.3
42,220 + MPMX26_00040 0.22 -1.4
42,221 + MPMX26_00040 0.22 -0.6
42,226 + MPMX26_00040 0.23 -1.2
42,226 + MPMX26_00040 0.23 -2.8
42,226 + MPMX26_00040 0.23 -1.2
42,226 + MPMX26_00040 0.23 -3.3
42,226 + MPMX26_00040 0.23 -1.3
42,231 + MPMX26_00040 0.23 +0.0
42,231 + MPMX26_00040 0.23 -0.3
42,231 + MPMX26_00040 0.23 -0.9
42,236 + MPMX26_00040 0.24 -2.5
42,242 + MPMX26_00040 0.25 -1.8
42,242 + MPMX26_00040 0.25 -2.0
42,244 + MPMX26_00040 0.25 -2.2
42,244 + MPMX26_00040 0.25 -3.0
42,256 + MPMX26_00040 0.27 -3.0
42,266 + MPMX26_00040 0.28 -1.3
42,269 + MPMX26_00040 0.29 -0.1
42,271 + MPMX26_00040 0.29 -1.1
42,288 + MPMX26_00040 0.31 -1.4
42,312 + MPMX26_00040 0.35 -0.7
42,346 + MPMX26_00040 0.39 -2.1
42,347 + MPMX26_00040 0.39 -1.6
42,347 + MPMX26_00040 0.39 -2.0
42,347 + MPMX26_00040 0.39 -1.9
42,347 + MPMX26_00040 0.39 -0.9
42,347 + MPMX26_00040 0.39 -0.6
42,347 + MPMX26_00040 0.39 -1.8
42,347 + MPMX26_00040 0.39 -0.2
42,347 + MPMX26_00040 0.39 -0.9
42,347 + MPMX26_00040 0.39 -0.9
42,347 + MPMX26_00040 0.39 -0.8
42,347 + MPMX26_00040 0.39 -1.5
42,347 + MPMX26_00040 0.39 -1.2
42,347 + MPMX26_00040 0.39 -1.8
42,407 + MPMX26_00040 0.48 -1.1
42,407 + MPMX26_00040 0.48 -2.0
42,415 + MPMX26_00040 0.49 -0.7
42,417 + MPMX26_00040 0.49 -1.4
42,417 + MPMX26_00040 0.49 -0.9
42,438 + MPMX26_00040 0.52 -1.7
42,443 + MPMX26_00040 0.53 -1.2
42,464 + MPMX26_00040 0.56 +0.9
42,464 + MPMX26_00040 0.56 -1.4
42,474 + MPMX26_00040 0.57 -1.6
42,474 + MPMX26_00040 0.57 -2.4
42,573 + MPMX26_00040 0.71 -2.0
42,574 + MPMX26_00040 0.71 -0.3
42,578 + MPMX26_00040 0.72 -1.3
42,609 + MPMX26_00040 0.76 -1.1
42,609 + MPMX26_00040 0.76 -1.9
42,609 + MPMX26_00040 0.76 -0.3
42,609 + MPMX26_00040 0.76 -0.9
42,609 + MPMX26_00040 0.76 -1.2
42,621 + MPMX26_00040 0.78 -1.6
42,626 + MPMX26_00040 0.78 -0.4
42,630 + MPMX26_00040 0.79 -2.0
42,636 + MPMX26_00040 0.80 -1.7
42,661 + MPMX26_00040 0.83 +0.4
42,671 + MPMX26_00040 0.85 +0.2
42,671 + MPMX26_00040 0.85 -1.9
42,671 + MPMX26_00040 0.85 -1.6
42,671 + MPMX26_00040 0.85 -0.5
42,671 + MPMX26_00040 0.85 -1.9
42,671 + MPMX26_00040 0.85 -2.9
42,673 + MPMX26_00040 0.85 +0.4
42,678 + MPMX26_00040 0.86 -0.2
42,684 + MPMX26_00040 0.86 -1.4
42,696 + MPMX26_00040 0.88 -0.3
42,696 + MPMX26_00040 0.88 -0.1
42,702 + MPMX26_00040 0.89 -2.1
42,702 + MPMX26_00040 0.89 -1.2
42,702 + MPMX26_00040 0.89 -1.9
42,702 + MPMX26_00040 0.89 -1.4
42,702 + MPMX26_00040 0.89 -0.4
42,714 + -0.4
42,747 + -2.1
42,757 + -1.9
42,766 + +0.1
42,766 + -0.6
42,766 + -1.0
42,766 + +0.2
42,766 + -0.3
42,771 + -0.1
42,805 + +0.5
42,900 + +0.9
42,992 + -0.1

Or see this region's nucleotide sequence