Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01247

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01246 and MPMX26_01247 are separated by 360 nucleotidesMPMX26_01247 and MPMX26_01248 are separated by 70 nucleotides MPMX26_01246: MPMX26_01246 - Cell division protein ZapE, at 1,315,751 to 1,316,887 _01246 MPMX26_01247: MPMX26_01247 - Malate synthase G, at 1,317,248 to 1,319,413 _01247 MPMX26_01248: MPMX26_01248 - D-amino acid dehydrogenase, at 1,319,484 to 1,320,764 _01248 Position (kb) 1317 1318 1319 1320Strain fitness (log2 ratio) -2 -1 0 1 2at 1316.257 kb on + strand, within MPMX26_01246at 1316.328 kb on + strand, within MPMX26_01246at 1316.359 kb on + strand, within MPMX26_01246at 1316.426 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.456 kb on + strand, within MPMX26_01246at 1316.476 kb on + strand, within MPMX26_01246at 1316.544 kb on + strand, within MPMX26_01246at 1316.555 kb on + strand, within MPMX26_01246at 1316.555 kb on + strand, within MPMX26_01246at 1316.557 kb on + strand, within MPMX26_01246at 1316.578 kb on + strand, within MPMX26_01246at 1316.583 kb on + strand, within MPMX26_01246at 1316.591 kb on - strand, within MPMX26_01246at 1316.639 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.644 kb on + strand, within MPMX26_01246at 1316.647 kb on + strand, within MPMX26_01246at 1316.654 kb on + strand, within MPMX26_01246at 1316.748 kb on + strand, within MPMX26_01246at 1316.748 kb on + strand, within MPMX26_01246at 1316.814 kb on + strandat 1317.244 kb on + strandat 1317.244 kb on + strandat 1317.311 kb on + strandat 1317.317 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.332 kb on + strandat 1317.340 kb on + strandat 1317.578 kb on + strand, within MPMX26_01247at 1317.578 kb on + strand, within MPMX26_01247at 1317.662 kb on + strand, within MPMX26_01247at 1317.706 kb on + strand, within MPMX26_01247at 1317.706 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.715 kb on + strand, within MPMX26_01247at 1317.859 kb on + strand, within MPMX26_01247at 1317.874 kb on + strand, within MPMX26_01247at 1317.989 kb on + strand, within MPMX26_01247at 1318.034 kb on + strand, within MPMX26_01247at 1318.061 kb on + strand, within MPMX26_01247at 1318.063 kb on + strand, within MPMX26_01247at 1318.099 kb on + strand, within MPMX26_01247at 1318.129 kb on + strand, within MPMX26_01247at 1318.129 kb on + strand, within MPMX26_01247at 1318.129 kb on + strand, within MPMX26_01247at 1318.136 kb on + strand, within MPMX26_01247at 1318.255 kb on + strand, within MPMX26_01247at 1318.255 kb on + strand, within MPMX26_01247at 1318.255 kb on + strand, within MPMX26_01247at 1318.312 kb on + strand, within MPMX26_01247at 1318.319 kb on + strand, within MPMX26_01247at 1318.319 kb on + strand, within MPMX26_01247at 1318.394 kb on + strand, within MPMX26_01247at 1318.405 kb on + strand, within MPMX26_01247at 1318.483 kb on + strand, within MPMX26_01247at 1318.483 kb on + strand, within MPMX26_01247at 1318.552 kb on + strand, within MPMX26_01247at 1318.573 kb on + strand, within MPMX26_01247at 1318.573 kb on + strand, within MPMX26_01247at 1318.582 kb on + strand, within MPMX26_01247at 1318.612 kb on + strand, within MPMX26_01247at 1318.622 kb on + strand, within MPMX26_01247at 1318.631 kb on + strand, within MPMX26_01247at 1318.652 kb on + strand, within MPMX26_01247at 1318.682 kb on + strand, within MPMX26_01247at 1318.747 kb on + strand, within MPMX26_01247at 1318.753 kb on + strand, within MPMX26_01247at 1318.753 kb on + strand, within MPMX26_01247at 1318.769 kb on + strand, within MPMX26_01247at 1318.769 kb on + strand, within MPMX26_01247at 1318.825 kb on + strand, within MPMX26_01247at 1318.825 kb on + strand, within MPMX26_01247at 1318.835 kb on + strand, within MPMX26_01247at 1318.835 kb on + strand, within MPMX26_01247at 1318.835 kb on + strand, within MPMX26_01247at 1318.928 kb on + strand, within MPMX26_01247at 1318.936 kb on + strand, within MPMX26_01247at 1318.936 kb on + strand, within MPMX26_01247at 1319.000 kb on + strand, within MPMX26_01247at 1319.042 kb on + strand, within MPMX26_01247at 1319.042 kb on + strand, within MPMX26_01247at 1319.047 kb on + strand, within MPMX26_01247at 1319.047 kb on + strand, within MPMX26_01247at 1319.047 kb on + strand, within MPMX26_01247at 1319.059 kb on + strand, within MPMX26_01247at 1319.059 kb on + strand, within MPMX26_01247at 1319.069 kb on + strand, within MPMX26_01247at 1319.069 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.075 kb on + strand, within MPMX26_01247at 1319.119 kb on + strand, within MPMX26_01247at 1319.135 kb on + strand, within MPMX26_01247at 1319.167 kb on + strand, within MPMX26_01247at 1319.174 kb on + strand, within MPMX26_01247at 1319.210 kb on + strandat 1319.258 kb on + strandat 1319.260 kb on + strandat 1319.345 kb on + strandat 1319.366 kb on + strandat 1319.368 kb on + strandat 1319.395 kb on + strandat 1319.398 kb on + strandat 1319.521 kb on - strandat 1319.538 kb on - strandat 1319.577 kb on - strandat 1319.579 kb on - strandat 1319.619 kb on - strand, within MPMX26_01248at 1319.628 kb on - strand, within MPMX26_01248at 1319.633 kb on - strand, within MPMX26_01248at 1319.655 kb on - strand, within MPMX26_01248at 1319.665 kb on - strand, within MPMX26_01248at 1319.670 kb on - strand, within MPMX26_01248at 1319.692 kb on - strand, within MPMX26_01248at 1319.697 kb on - strand, within MPMX26_01248at 1319.713 kb on - strand, within MPMX26_01248at 1319.718 kb on - strand, within MPMX26_01248at 1319.751 kb on - strand, within MPMX26_01248at 1319.886 kb on - strand, within MPMX26_01248at 1319.891 kb on - strand, within MPMX26_01248at 1319.891 kb on - strand, within MPMX26_01248at 1319.988 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.036 kb on - strand, within MPMX26_01248at 1320.041 kb on - strand, within MPMX26_01248at 1320.041 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.056 kb on - strand, within MPMX26_01248at 1320.061 kb on - strand, within MPMX26_01248at 1320.066 kb on - strand, within MPMX26_01248at 1320.066 kb on - strand, within MPMX26_01248at 1320.200 kb on - strand, within MPMX26_01248at 1320.307 kb on - strand, within MPMX26_01248at 1320.345 kb on - strand, within MPMX26_01248at 1320.355 kb on - strand, within MPMX26_01248at 1320.362 kb on - strand, within MPMX26_01248

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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1,316,257 + MPMX26_01246 0.45 +0.8
1,316,328 + MPMX26_01246 0.51 -0.7
1,316,359 + MPMX26_01246 0.53 -0.4
1,316,426 + MPMX26_01246 0.59 +0.1
1,316,456 + MPMX26_01246 0.62 +0.3
1,316,456 + MPMX26_01246 0.62 -0.2
1,316,456 + MPMX26_01246 0.62 +0.8
1,316,476 + MPMX26_01246 0.64 -0.3
1,316,544 + MPMX26_01246 0.70 -1.3
1,316,555 + MPMX26_01246 0.71 -0.7
1,316,555 + MPMX26_01246 0.71 -1.2
1,316,557 + MPMX26_01246 0.71 +1.1
1,316,578 + MPMX26_01246 0.73 -1.0
1,316,583 + MPMX26_01246 0.73 +0.6
1,316,591 - MPMX26_01246 0.74 +1.1
1,316,639 + MPMX26_01246 0.78 +2.1
1,316,644 + MPMX26_01246 0.79 -1.2
1,316,644 + MPMX26_01246 0.79 -0.2
1,316,644 + MPMX26_01246 0.79 +0.1
1,316,644 + MPMX26_01246 0.79 -0.7
1,316,644 + MPMX26_01246 0.79 -0.9
1,316,647 + MPMX26_01246 0.79 -0.9
1,316,654 + MPMX26_01246 0.79 -1.7
1,316,748 + MPMX26_01246 0.88 +1.1
1,316,748 + MPMX26_01246 0.88 +1.1
1,316,814 + -1.7
1,317,244 + +0.4
1,317,244 + +0.7
1,317,311 + +0.2
1,317,317 + -0.6
1,317,332 + +1.0
1,317,332 + +0.4
1,317,332 + -0.2
1,317,332 + -0.4
1,317,332 + -0.4
1,317,332 + +1.4
1,317,340 + +0.1
1,317,578 + MPMX26_01247 0.15 +0.3
1,317,578 + MPMX26_01247 0.15 +0.0
1,317,662 + MPMX26_01247 0.19 +0.0
1,317,706 + MPMX26_01247 0.21 -0.5
1,317,706 + MPMX26_01247 0.21 +0.7
1,317,715 + MPMX26_01247 0.22 +0.1
1,317,715 + MPMX26_01247 0.22 -0.7
1,317,715 + MPMX26_01247 0.22 -0.5
1,317,859 + MPMX26_01247 0.28 +1.1
1,317,874 + MPMX26_01247 0.29 +0.0
1,317,989 + MPMX26_01247 0.34 -0.4
1,318,034 + MPMX26_01247 0.36 +0.1
1,318,061 + MPMX26_01247 0.38 +0.3
1,318,063 + MPMX26_01247 0.38 -1.6
1,318,099 + MPMX26_01247 0.39 +0.4
1,318,129 + MPMX26_01247 0.41 -0.1
1,318,129 + MPMX26_01247 0.41 -0.2
1,318,129 + MPMX26_01247 0.41 +0.6
1,318,136 + MPMX26_01247 0.41 -1.3
1,318,255 + MPMX26_01247 0.46 -0.2
1,318,255 + MPMX26_01247 0.46 +0.9
1,318,255 + MPMX26_01247 0.46 +0.4
1,318,312 + MPMX26_01247 0.49 +0.4
1,318,319 + MPMX26_01247 0.49 +1.0
1,318,319 + MPMX26_01247 0.49 -0.7
1,318,394 + MPMX26_01247 0.53 -0.3
1,318,405 + MPMX26_01247 0.53 +0.4
1,318,483 + MPMX26_01247 0.57 +1.2
1,318,483 + MPMX26_01247 0.57 +0.6
1,318,552 + MPMX26_01247 0.60 -0.6
1,318,573 + MPMX26_01247 0.61 +1.1
1,318,573 + MPMX26_01247 0.61 -0.8
1,318,582 + MPMX26_01247 0.62 -0.3
1,318,612 + MPMX26_01247 0.63 +0.5
1,318,622 + MPMX26_01247 0.63 +0.1
1,318,631 + MPMX26_01247 0.64 +0.3
1,318,652 + MPMX26_01247 0.65 +0.0
1,318,682 + MPMX26_01247 0.66 -2.0
1,318,747 + MPMX26_01247 0.69 +0.3
1,318,753 + MPMX26_01247 0.69 -0.1
1,318,753 + MPMX26_01247 0.69 +1.7
1,318,769 + MPMX26_01247 0.70 +1.0
1,318,769 + MPMX26_01247 0.70 -0.4
1,318,825 + MPMX26_01247 0.73 +0.4
1,318,825 + MPMX26_01247 0.73 +0.4
1,318,835 + MPMX26_01247 0.73 +0.8
1,318,835 + MPMX26_01247 0.73 -0.5
1,318,835 + MPMX26_01247 0.73 +0.4
1,318,928 + MPMX26_01247 0.78 +0.0
1,318,936 + MPMX26_01247 0.78 +0.2
1,318,936 + MPMX26_01247 0.78 -0.3
1,319,000 + MPMX26_01247 0.81 -0.4
1,319,042 + MPMX26_01247 0.83 -0.5
1,319,042 + MPMX26_01247 0.83 +0.5
1,319,047 + MPMX26_01247 0.83 +0.1
1,319,047 + MPMX26_01247 0.83 +0.1
1,319,047 + MPMX26_01247 0.83 -0.4
1,319,059 + MPMX26_01247 0.84 -0.3
1,319,059 + MPMX26_01247 0.84 -1.1
1,319,069 + MPMX26_01247 0.84 +0.1
1,319,069 + MPMX26_01247 0.84 -0.1
1,319,075 + MPMX26_01247 0.84 -0.5
1,319,075 + MPMX26_01247 0.84 -0.3
1,319,075 + MPMX26_01247 0.84 +0.6
1,319,075 + MPMX26_01247 0.84 -0.2
1,319,075 + MPMX26_01247 0.84 -1.3
1,319,075 + MPMX26_01247 0.84 -0.1
1,319,075 + MPMX26_01247 0.84 -0.7
1,319,119 + MPMX26_01247 0.86 +0.8
1,319,135 + MPMX26_01247 0.87 -0.3
1,319,167 + MPMX26_01247 0.89 -1.5
1,319,174 + MPMX26_01247 0.89 -0.5
1,319,210 + -0.3
1,319,258 + +0.0
1,319,260 + +0.1
1,319,345 + -0.1
1,319,366 + +0.6
1,319,368 + -0.1
1,319,395 + +0.4
1,319,398 + -0.2
1,319,521 - +0.4
1,319,538 - +0.3
1,319,577 - -0.9
1,319,579 - -0.3
1,319,619 - MPMX26_01248 0.11 -0.2
1,319,628 - MPMX26_01248 0.11 -0.6
1,319,633 - MPMX26_01248 0.12 -0.3
1,319,655 - MPMX26_01248 0.13 +0.2
1,319,665 - MPMX26_01248 0.14 -0.2
1,319,670 - MPMX26_01248 0.15 -0.5
1,319,692 - MPMX26_01248 0.16 -1.3
1,319,697 - MPMX26_01248 0.17 -0.0
1,319,713 - MPMX26_01248 0.18 -0.2
1,319,718 - MPMX26_01248 0.18 +0.5
1,319,751 - MPMX26_01248 0.21 +0.0
1,319,886 - MPMX26_01248 0.31 +0.6
1,319,891 - MPMX26_01248 0.32 -0.7
1,319,891 - MPMX26_01248 0.32 -0.1
1,319,988 - MPMX26_01248 0.39 -0.9
1,320,036 - MPMX26_01248 0.43 -0.6
1,320,036 - MPMX26_01248 0.43 -0.1
1,320,036 - MPMX26_01248 0.43 -0.1
1,320,036 - MPMX26_01248 0.43 -0.3
1,320,036 - MPMX26_01248 0.43 -0.5
1,320,036 - MPMX26_01248 0.43 +0.8
1,320,036 - MPMX26_01248 0.43 -0.4
1,320,036 - MPMX26_01248 0.43 +0.1
1,320,036 - MPMX26_01248 0.43 -1.0
1,320,036 - MPMX26_01248 0.43 +0.4
1,320,036 - MPMX26_01248 0.43 +0.3
1,320,036 - MPMX26_01248 0.43 -0.9
1,320,041 - MPMX26_01248 0.43 +1.1
1,320,041 - MPMX26_01248 0.43 +1.4
1,320,056 - MPMX26_01248 0.45 -0.2
1,320,056 - MPMX26_01248 0.45 +0.2
1,320,056 - MPMX26_01248 0.45 -0.1
1,320,056 - MPMX26_01248 0.45 -0.2
1,320,056 - MPMX26_01248 0.45 +0.5
1,320,056 - MPMX26_01248 0.45 -0.3
1,320,056 - MPMX26_01248 0.45 -0.9
1,320,056 - MPMX26_01248 0.45 +0.3
1,320,061 - MPMX26_01248 0.45 -0.4
1,320,066 - MPMX26_01248 0.45 -0.8
1,320,066 - MPMX26_01248 0.45 -0.1
1,320,200 - MPMX26_01248 0.56 -0.7
1,320,307 - MPMX26_01248 0.64 +1.8
1,320,345 - MPMX26_01248 0.67 -0.4
1,320,355 - MPMX26_01248 0.68 -2.0
1,320,362 - MPMX26_01248 0.69 -0.1

Or see this region's nucleotide sequence