Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00363

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00361 and MPMX26_00362 are separated by 34 nucleotidesMPMX26_00362 and MPMX26_00363 are separated by 73 nucleotidesMPMX26_00363 and MPMX26_00364 are separated by 294 nucleotidesMPMX26_00364 and MPMX26_00365 are separated by 34 nucleotides MPMX26_00361: MPMX26_00361 - ABC transporter ATP-binding protein uup, at 391,459 to 393,354 _00361 MPMX26_00362: MPMX26_00362 - Protein SlyX, at 393,389 to 393,634 _00362 MPMX26_00363: MPMX26_00363 - hypothetical protein, at 393,708 to 394,733 _00363 MPMX26_00364: MPMX26_00364 - hypothetical protein, at 395,028 to 395,477 _00364 MPMX26_00365: MPMX26_00365 - DNA topoisomerase 1, at 395,512 to 398,154 _00365 Position (kb) 393 394 395Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 392.751 kb on - strand, within MPMX26_00361at 392.751 kb on - strand, within MPMX26_00361at 392.760 kb on - strand, within MPMX26_00361at 392.803 kb on - strand, within MPMX26_00361at 392.848 kb on - strand, within MPMX26_00361at 392.848 kb on - strand, within MPMX26_00361at 392.850 kb on - strand, within MPMX26_00361at 392.850 kb on - strand, within MPMX26_00361at 392.850 kb on - strand, within MPMX26_00361at 392.850 kb on - strand, within MPMX26_00361at 392.855 kb on - strand, within MPMX26_00361at 392.858 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.865 kb on - strand, within MPMX26_00361at 392.904 kb on - strand, within MPMX26_00361at 392.926 kb on - strand, within MPMX26_00361at 392.926 kb on - strand, within MPMX26_00361at 392.973 kb on - strand, within MPMX26_00361at 392.984 kb on - strand, within MPMX26_00361at 392.989 kb on - strand, within MPMX26_00361at 392.989 kb on - strand, within MPMX26_00361at 392.999 kb on - strand, within MPMX26_00361at 393.045 kb on - strand, within MPMX26_00361at 393.103 kb on - strand, within MPMX26_00361at 393.111 kb on - strand, within MPMX26_00361at 393.132 kb on - strand, within MPMX26_00361at 393.132 kb on - strand, within MPMX26_00361at 393.171 kb on - strandat 393.195 kb on - strandat 393.206 kb on - strandat 393.206 kb on - strandat 393.211 kb on - strandat 393.281 kb on - strandat 393.281 kb on - strandat 393.301 kb on - strandat 393.301 kb on - strandat 393.303 kb on - strandat 393.303 kb on - strandat 393.349 kb on - strandat 393.357 kb on - strandat 393.357 kb on - strandat 393.382 kb on + strandat 393.487 kb on + strand, within MPMX26_00362at 393.499 kb on + strand, within MPMX26_00362at 393.499 kb on + strand, within MPMX26_00362at 393.513 kb on + strand, within MPMX26_00362at 393.513 kb on + strand, within MPMX26_00362at 393.513 kb on + strand, within MPMX26_00362at 393.527 kb on - strand, within MPMX26_00362at 393.528 kb on + strand, within MPMX26_00362at 393.528 kb on + strand, within MPMX26_00362at 393.561 kb on + strand, within MPMX26_00362at 393.588 kb on + strand, within MPMX26_00362at 393.588 kb on + strand, within MPMX26_00362at 393.598 kb on + strand, within MPMX26_00362at 393.628 kb on - strandat 393.671 kb on + strandat 393.671 kb on + strandat 393.671 kb on + strandat 393.684 kb on + strandat 393.686 kb on + strandat 393.686 kb on + strandat 393.686 kb on + strandat 393.686 kb on + strandat 393.686 kb on + strandat 393.717 kb on + strandat 393.717 kb on + strandat 393.717 kb on + strandat 393.740 kb on + strandat 393.774 kb on + strandat 393.774 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on + strandat 393.782 kb on - strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.784 kb on + strandat 393.792 kb on - strandat 393.800 kb on + strandat 393.846 kb on + strand, within MPMX26_00363at 393.860 kb on + strand, within MPMX26_00363at 393.877 kb on + strand, within MPMX26_00363at 393.904 kb on + strand, within MPMX26_00363at 393.914 kb on + strand, within MPMX26_00363at 393.914 kb on + strand, within MPMX26_00363at 393.933 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.941 kb on + strand, within MPMX26_00363at 393.943 kb on + strand, within MPMX26_00363at 393.949 kb on - strand, within MPMX26_00363at 393.949 kb on - strand, within MPMX26_00363at 393.966 kb on - strand, within MPMX26_00363at 394.047 kb on - strand, within MPMX26_00363at 394.071 kb on + strand, within MPMX26_00363at 394.071 kb on + strand, within MPMX26_00363at 394.079 kb on + strand, within MPMX26_00363at 394.101 kb on + strand, within MPMX26_00363at 394.101 kb on + strand, within MPMX26_00363at 394.124 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.194 kb on + strand, within MPMX26_00363at 394.197 kb on + strand, within MPMX26_00363at 394.197 kb on + strand, within MPMX26_00363at 394.204 kb on + strand, within MPMX26_00363at 394.249 kb on + strand, within MPMX26_00363at 394.348 kb on + strand, within MPMX26_00363at 394.362 kb on + strand, within MPMX26_00363at 394.362 kb on + strand, within MPMX26_00363at 394.364 kb on + strand, within MPMX26_00363at 394.372 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.391 kb on + strand, within MPMX26_00363at 394.466 kb on + strand, within MPMX26_00363at 394.485 kb on + strand, within MPMX26_00363at 394.525 kb on + strand, within MPMX26_00363at 394.592 kb on + strand, within MPMX26_00363at 394.593 kb on + strand, within MPMX26_00363at 394.600 kb on - strand, within MPMX26_00363at 394.600 kb on - strand, within MPMX26_00363at 394.711 kb on - strandat 394.779 kb on + strandat 394.855 kb on - strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.936 kb on + strandat 394.988 kb on + strandat 394.990 kb on - strandat 394.993 kb on + strandat 394.993 kb on + strandat 395.085 kb on + strand, within MPMX26_00364at 395.092 kb on + strand, within MPMX26_00364at 395.092 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.098 kb on + strand, within MPMX26_00364at 395.149 kb on + strand, within MPMX26_00364at 395.150 kb on + strand, within MPMX26_00364at 395.161 kb on + strand, within MPMX26_00364at 395.161 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.319 kb on + strand, within MPMX26_00364at 395.367 kb on + strand, within MPMX26_00364at 395.386 kb on + strand, within MPMX26_00364at 395.415 kb on + strand, within MPMX26_00364at 395.415 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.422 kb on + strand, within MPMX26_00364at 395.436 kb on + strandat 395.441 kb on + strandat 395.448 kb on + strandat 395.469 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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392,751 - MPMX26_00361 0.68 +0.8
392,751 - MPMX26_00361 0.68 +0.4
392,760 - MPMX26_00361 0.69 -0.6
392,803 - MPMX26_00361 0.71 +0.7
392,848 - MPMX26_00361 0.73 -0.4
392,848 - MPMX26_00361 0.73 +0.1
392,850 - MPMX26_00361 0.73 -0.8
392,850 - MPMX26_00361 0.73 -0.3
392,850 - MPMX26_00361 0.73 -0.1
392,850 - MPMX26_00361 0.73 +0.3
392,855 - MPMX26_00361 0.74 +0.1
392,858 - MPMX26_00361 0.74 -0.1
392,865 - MPMX26_00361 0.74 -0.7
392,865 - MPMX26_00361 0.74 +0.4
392,865 - MPMX26_00361 0.74 -0.2
392,865 - MPMX26_00361 0.74 +0.1
392,865 - MPMX26_00361 0.74 -0.1
392,865 - MPMX26_00361 0.74 +0.7
392,904 - MPMX26_00361 0.76 +0.1
392,926 - MPMX26_00361 0.77 +1.5
392,926 - MPMX26_00361 0.77 -0.3
392,973 - MPMX26_00361 0.80 -0.7
392,984 - MPMX26_00361 0.80 -0.9
392,989 - MPMX26_00361 0.81 +0.1
392,989 - MPMX26_00361 0.81 -0.5
392,999 - MPMX26_00361 0.81 -0.1
393,045 - MPMX26_00361 0.84 -0.5
393,103 - MPMX26_00361 0.87 -0.3
393,111 - MPMX26_00361 0.87 -0.6
393,132 - MPMX26_00361 0.88 +0.8
393,132 - MPMX26_00361 0.88 -0.6
393,171 - +0.3
393,195 - +0.4
393,206 - -0.0
393,206 - -0.6
393,211 - -0.8
393,281 - +1.2
393,281 - +0.6
393,301 - -0.5
393,301 - +0.0
393,303 - -0.4
393,303 - +0.1
393,349 - -0.0
393,357 - -1.3
393,357 - +0.7
393,382 + -0.9
393,487 + MPMX26_00362 0.40 -0.8
393,499 + MPMX26_00362 0.45 +0.2
393,499 + MPMX26_00362 0.45 +1.2
393,513 + MPMX26_00362 0.50 -0.5
393,513 + MPMX26_00362 0.50 -1.3
393,513 + MPMX26_00362 0.50 -0.0
393,527 - MPMX26_00362 0.56 -0.2
393,528 + MPMX26_00362 0.57 +0.8
393,528 + MPMX26_00362 0.57 +0.1
393,561 + MPMX26_00362 0.70 +0.4
393,588 + MPMX26_00362 0.81 -0.6
393,588 + MPMX26_00362 0.81 +0.7
393,598 + MPMX26_00362 0.85 -0.6
393,628 - +0.8
393,671 + +0.7
393,671 + -0.4
393,671 + +0.9
393,684 + -0.6
393,686 + -0.3
393,686 + +1.9
393,686 + -1.3
393,686 + +0.7
393,686 + +0.2
393,717 + +0.4
393,717 + +0.2
393,717 + -0.2
393,740 + +0.0
393,774 + -0.6
393,774 + +0.7
393,782 + +0.1
393,782 + +0.4
393,782 + +0.1
393,782 + +0.1
393,782 + -0.2
393,782 + -0.5
393,782 + -0.5
393,782 + -0.2
393,782 + +0.5
393,782 - +0.7
393,784 + -0.5
393,784 + +0.3
393,784 + +0.5
393,784 + -0.7
393,784 + +1.3
393,784 + +0.3
393,784 + +1.1
393,784 + -0.8
393,792 - +0.2
393,800 + -0.8
393,846 + MPMX26_00363 0.13 -0.2
393,860 + MPMX26_00363 0.15 -0.4
393,877 + MPMX26_00363 0.16 -0.0
393,904 + MPMX26_00363 0.19 +0.8
393,914 + MPMX26_00363 0.20 -0.3
393,914 + MPMX26_00363 0.20 -0.5
393,933 + MPMX26_00363 0.22 -0.1
393,941 + MPMX26_00363 0.23 -0.7
393,941 + MPMX26_00363 0.23 +0.6
393,941 + MPMX26_00363 0.23 +0.0
393,941 + MPMX26_00363 0.23 -1.0
393,941 + MPMX26_00363 0.23 -0.7
393,941 + MPMX26_00363 0.23 -1.7
393,941 + MPMX26_00363 0.23 -3.0
393,943 + MPMX26_00363 0.23 -0.2
393,949 - MPMX26_00363 0.23 -0.0
393,949 - MPMX26_00363 0.23 +1.2
393,966 - MPMX26_00363 0.25 +1.4
394,047 - MPMX26_00363 0.33 +1.1
394,071 + MPMX26_00363 0.35 -1.0
394,071 + MPMX26_00363 0.35 +0.1
394,079 + MPMX26_00363 0.36 -0.5
394,101 + MPMX26_00363 0.38 +0.6
394,101 + MPMX26_00363 0.38 -0.3
394,124 + MPMX26_00363 0.41 -0.3
394,194 + MPMX26_00363 0.47 -0.2
394,194 + MPMX26_00363 0.47 -0.5
394,194 + MPMX26_00363 0.47 -0.6
394,197 + MPMX26_00363 0.48 +0.3
394,197 + MPMX26_00363 0.48 -0.7
394,204 + MPMX26_00363 0.48 -0.0
394,249 + MPMX26_00363 0.53 +0.1
394,348 + MPMX26_00363 0.62 -0.6
394,362 + MPMX26_00363 0.64 +0.5
394,362 + MPMX26_00363 0.64 -0.2
394,364 + MPMX26_00363 0.64 +0.4
394,372 + MPMX26_00363 0.65 -0.1
394,391 + MPMX26_00363 0.67 +0.6
394,391 + MPMX26_00363 0.67 +0.7
394,391 + MPMX26_00363 0.67 -0.2
394,391 + MPMX26_00363 0.67 -0.8
394,391 + MPMX26_00363 0.67 -0.1
394,466 + MPMX26_00363 0.74 -0.3
394,485 + MPMX26_00363 0.76 +0.1
394,525 + MPMX26_00363 0.80 +0.4
394,592 + MPMX26_00363 0.86 -0.7
394,593 + MPMX26_00363 0.86 +0.5
394,600 - MPMX26_00363 0.87 -0.5
394,600 - MPMX26_00363 0.87 +0.0
394,711 - +0.1
394,779 + +0.4
394,855 - +1.0
394,936 + +0.1
394,936 + -0.6
394,936 + -0.3
394,936 + +0.8
394,936 + -0.1
394,936 + -0.8
394,988 + -0.5
394,990 - -1.5
394,993 + -0.1
394,993 + +0.3
395,085 + MPMX26_00364 0.13 -0.0
395,092 + MPMX26_00364 0.14 -0.2
395,092 + MPMX26_00364 0.14 -0.4
395,098 + MPMX26_00364 0.16 -1.2
395,098 + MPMX26_00364 0.16 -0.5
395,098 + MPMX26_00364 0.16 -0.5
395,149 + MPMX26_00364 0.27 -0.3
395,150 + MPMX26_00364 0.27 -0.6
395,161 + MPMX26_00364 0.30 -0.3
395,161 + MPMX26_00364 0.30 +0.1
395,319 + MPMX26_00364 0.65 -0.7
395,319 + MPMX26_00364 0.65 -0.1
395,319 + MPMX26_00364 0.65 +1.5
395,319 + MPMX26_00364 0.65 -0.7
395,367 + MPMX26_00364 0.75 -0.9
395,386 + MPMX26_00364 0.80 -0.6
395,415 + MPMX26_00364 0.86 +0.0
395,415 + MPMX26_00364 0.86 -0.2
395,422 + MPMX26_00364 0.88 -0.7
395,422 + MPMX26_00364 0.88 +0.7
395,422 + MPMX26_00364 0.88 -0.4
395,422 + MPMX26_00364 0.88 -0.5
395,422 + MPMX26_00364 0.88 -0.0
395,422 + MPMX26_00364 0.88 +1.1
395,422 + MPMX26_00364 0.88 -0.8
395,436 + +0.5
395,441 + -0.3
395,448 + -0.1
395,469 + -0.7

Or see this region's nucleotide sequence