Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02612

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02611 and MPMX26_02612 are separated by 353 nucleotidesMPMX26_02612 and MPMX26_02613 are separated by 41 nucleotides MPMX26_02611: MPMX26_02611 - Tryptophan synthase alpha chain, at 2,704,615 to 2,705,418 _02611 MPMX26_02612: MPMX26_02612 - hypothetical protein, at 2,705,772 to 2,707,103 _02612 MPMX26_02613: MPMX26_02613 - hypothetical protein, at 2,707,145 to 2,708,119 _02613 Position (kb) 2705 2706 2707 2708Strain fitness (log2 ratio) -1 0 1 2at 2705.731 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.796 kb on + strandat 2705.859 kb on + strandat 2705.886 kb on + strandat 2705.916 kb on + strand, within MPMX26_02612at 2706.033 kb on + strand, within MPMX26_02612at 2706.033 kb on + strand, within MPMX26_02612at 2706.035 kb on + strand, within MPMX26_02612at 2706.072 kb on + strand, within MPMX26_02612at 2706.072 kb on + strand, within MPMX26_02612at 2706.072 kb on + strand, within MPMX26_02612at 2706.072 kb on + strand, within MPMX26_02612at 2706.132 kb on + strand, within MPMX26_02612at 2706.174 kb on + strand, within MPMX26_02612at 2706.185 kb on + strand, within MPMX26_02612at 2706.196 kb on + strand, within MPMX26_02612at 2706.206 kb on + strand, within MPMX26_02612at 2706.255 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.273 kb on + strand, within MPMX26_02612at 2706.281 kb on - strand, within MPMX26_02612at 2706.290 kb on + strand, within MPMX26_02612at 2706.290 kb on + strand, within MPMX26_02612at 2706.385 kb on + strand, within MPMX26_02612at 2706.443 kb on + strand, within MPMX26_02612at 2706.443 kb on + strand, within MPMX26_02612at 2706.443 kb on + strand, within MPMX26_02612at 2706.458 kb on + strand, within MPMX26_02612at 2706.483 kb on + strand, within MPMX26_02612at 2706.501 kb on + strand, within MPMX26_02612at 2706.540 kb on + strand, within MPMX26_02612at 2706.577 kb on + strand, within MPMX26_02612at 2706.595 kb on + strand, within MPMX26_02612at 2706.609 kb on + strand, within MPMX26_02612at 2706.609 kb on + strand, within MPMX26_02612at 2706.626 kb on + strand, within MPMX26_02612at 2706.626 kb on + strand, within MPMX26_02612at 2706.626 kb on + strand, within MPMX26_02612at 2706.647 kb on + strand, within MPMX26_02612at 2706.647 kb on + strand, within MPMX26_02612at 2706.657 kb on + strand, within MPMX26_02612at 2706.721 kb on + strand, within MPMX26_02612at 2706.734 kb on + strand, within MPMX26_02612at 2706.734 kb on + strand, within MPMX26_02612at 2706.734 kb on + strand, within MPMX26_02612at 2706.737 kb on + strand, within MPMX26_02612at 2706.737 kb on + strand, within MPMX26_02612at 2706.750 kb on + strand, within MPMX26_02612at 2706.755 kb on + strand, within MPMX26_02612at 2706.755 kb on + strand, within MPMX26_02612at 2706.755 kb on + strand, within MPMX26_02612at 2706.755 kb on + strand, within MPMX26_02612at 2706.760 kb on + strand, within MPMX26_02612at 2706.766 kb on + strand, within MPMX26_02612at 2706.939 kb on + strand, within MPMX26_02612at 2706.947 kb on + strand, within MPMX26_02612at 2706.966 kb on + strand, within MPMX26_02612at 2706.969 kb on + strand, within MPMX26_02612at 2706.975 kb on + strandat 2706.975 kb on + strandat 2706.975 kb on + strandat 2706.975 kb on + strandat 2706.980 kb on + strandat 2707.026 kb on + strandat 2707.059 kb on + strandat 2707.076 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.088 kb on + strandat 2707.174 kb on + strandat 2707.219 kb on + strandat 2707.219 kb on + strandat 2707.516 kb on - strand, within MPMX26_02613at 2707.907 kb on + strand, within MPMX26_02613at 2707.910 kb on - strand, within MPMX26_02613

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,705,731 + +0.6
2,705,796 + -0.7
2,705,796 + +0.1
2,705,796 + -0.6
2,705,796 + -0.4
2,705,796 + +2.0
2,705,796 + -0.4
2,705,796 + -0.3
2,705,796 + -0.3
2,705,796 + +0.7
2,705,796 + -0.7
2,705,859 + +0.1
2,705,886 + -1.7
2,705,916 + MPMX26_02612 0.11 -0.0
2,706,033 + MPMX26_02612 0.20 -0.6
2,706,033 + MPMX26_02612 0.20 -0.1
2,706,035 + MPMX26_02612 0.20 -0.1
2,706,072 + MPMX26_02612 0.23 -0.7
2,706,072 + MPMX26_02612 0.23 -1.5
2,706,072 + MPMX26_02612 0.23 -0.7
2,706,072 + MPMX26_02612 0.23 +0.5
2,706,132 + MPMX26_02612 0.27 +0.3
2,706,174 + MPMX26_02612 0.30 +0.4
2,706,185 + MPMX26_02612 0.31 +0.1
2,706,196 + MPMX26_02612 0.32 +0.6
2,706,206 + MPMX26_02612 0.33 +0.4
2,706,255 + MPMX26_02612 0.36 -0.4
2,706,273 + MPMX26_02612 0.38 -0.3
2,706,273 + MPMX26_02612 0.38 -1.2
2,706,273 + MPMX26_02612 0.38 -0.2
2,706,273 + MPMX26_02612 0.38 -0.6
2,706,273 + MPMX26_02612 0.38 +0.1
2,706,273 + MPMX26_02612 0.38 -0.1
2,706,273 + MPMX26_02612 0.38 +0.3
2,706,273 + MPMX26_02612 0.38 +1.6
2,706,281 - MPMX26_02612 0.38 -0.2
2,706,290 + MPMX26_02612 0.39 -0.7
2,706,290 + MPMX26_02612 0.39 -0.2
2,706,385 + MPMX26_02612 0.46 -0.4
2,706,443 + MPMX26_02612 0.50 +0.3
2,706,443 + MPMX26_02612 0.50 -0.4
2,706,443 + MPMX26_02612 0.50 +0.5
2,706,458 + MPMX26_02612 0.52 -1.0
2,706,483 + MPMX26_02612 0.53 -0.7
2,706,501 + MPMX26_02612 0.55 -0.3
2,706,540 + MPMX26_02612 0.58 +0.6
2,706,577 + MPMX26_02612 0.60 +0.8
2,706,595 + MPMX26_02612 0.62 -0.1
2,706,609 + MPMX26_02612 0.63 -0.2
2,706,609 + MPMX26_02612 0.63 -0.5
2,706,626 + MPMX26_02612 0.64 -1.4
2,706,626 + MPMX26_02612 0.64 -0.2
2,706,626 + MPMX26_02612 0.64 -0.6
2,706,647 + MPMX26_02612 0.66 -0.1
2,706,647 + MPMX26_02612 0.66 -1.3
2,706,657 + MPMX26_02612 0.66 +0.2
2,706,721 + MPMX26_02612 0.71 -0.4
2,706,734 + MPMX26_02612 0.72 -1.2
2,706,734 + MPMX26_02612 0.72 -0.1
2,706,734 + MPMX26_02612 0.72 -1.1
2,706,737 + MPMX26_02612 0.72 -0.7
2,706,737 + MPMX26_02612 0.72 -0.1
2,706,750 + MPMX26_02612 0.73 +0.1
2,706,755 + MPMX26_02612 0.74 -0.5
2,706,755 + MPMX26_02612 0.74 +0.3
2,706,755 + MPMX26_02612 0.74 +0.1
2,706,755 + MPMX26_02612 0.74 -0.3
2,706,760 + MPMX26_02612 0.74 -0.6
2,706,766 + MPMX26_02612 0.75 +0.9
2,706,939 + MPMX26_02612 0.88 +0.6
2,706,947 + MPMX26_02612 0.88 -0.8
2,706,966 + MPMX26_02612 0.90 -0.3
2,706,969 + MPMX26_02612 0.90 +0.6
2,706,975 + +0.2
2,706,975 + -0.5
2,706,975 + +0.1
2,706,975 + -0.2
2,706,980 + +0.2
2,707,026 + -0.3
2,707,059 + -1.3
2,707,076 + -0.0
2,707,088 + -0.2
2,707,088 + +0.5
2,707,088 + -0.6
2,707,088 + +0.4
2,707,088 + -0.7
2,707,088 + -0.5
2,707,088 + +0.3
2,707,088 + -0.3
2,707,088 + +0.4
2,707,174 + +0.6
2,707,219 + +0.4
2,707,219 + +0.6
2,707,516 - MPMX26_02613 0.38 +2.2
2,707,907 + MPMX26_02613 0.78 +1.0
2,707,910 - MPMX26_02613 0.78 +0.2

Or see this region's nucleotide sequence