Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02244

Experiment: no UV control

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02243 and MPMX26_02244 are separated by 10 nucleotidesMPMX26_02244 and MPMX26_02245 are separated by 415 nucleotides MPMX26_02243: MPMX26_02243 - Potassium-transporting ATPase ATP-binding subunit, at 2,305,164 to 2,307,188 _02243 MPMX26_02244: MPMX26_02244 - Potassium-transporting ATPase potassium-binding subunit, at 2,307,199 to 2,308,911 _02244 MPMX26_02245: MPMX26_02245 - hypothetical protein, at 2,309,327 to 2,310,115 _02245 Position (kb) 2307 2308 2309Strain fitness (log2 ratio) -1 0 1 2 3 4at 2307.303 kb on - strandat 2307.813 kb on - strand, within MPMX26_02244at 2308.271 kb on - strand, within MPMX26_02244at 2309.342 kb on - strandat 2309.342 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.353 kb on - strandat 2309.368 kb on - strandat 2309.368 kb on - strandat 2309.375 kb on - strandat 2309.380 kb on - strandat 2309.380 kb on - strandat 2309.395 kb on - strandat 2309.405 kb on - strandat 2309.405 kb on - strandat 2309.405 kb on - strandat 2309.415 kb on - strand, within MPMX26_02245at 2309.415 kb on - strand, within MPMX26_02245at 2309.415 kb on - strand, within MPMX26_02245at 2309.420 kb on - strand, within MPMX26_02245at 2309.473 kb on - strand, within MPMX26_02245at 2309.483 kb on - strand, within MPMX26_02245at 2309.503 kb on - strand, within MPMX26_02245at 2309.530 kb on - strand, within MPMX26_02245at 2309.537 kb on - strand, within MPMX26_02245at 2309.542 kb on - strand, within MPMX26_02245at 2309.542 kb on - strand, within MPMX26_02245at 2309.542 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.547 kb on - strand, within MPMX26_02245at 2309.552 kb on - strand, within MPMX26_02245at 2309.570 kb on - strand, within MPMX26_02245at 2309.594 kb on - strand, within MPMX26_02245at 2309.594 kb on - strand, within MPMX26_02245at 2309.599 kb on - strand, within MPMX26_02245at 2309.626 kb on - strand, within MPMX26_02245at 2309.626 kb on - strand, within MPMX26_02245at 2309.648 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.653 kb on - strand, within MPMX26_02245at 2309.660 kb on - strand, within MPMX26_02245at 2309.662 kb on - strand, within MPMX26_02245at 2309.713 kb on - strand, within MPMX26_02245at 2309.713 kb on - strand, within MPMX26_02245at 2309.772 kb on - strand, within MPMX26_02245at 2309.779 kb on - strand, within MPMX26_02245at 2309.792 kb on - strand, within MPMX26_02245at 2309.810 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.858 kb on - strand, within MPMX26_02245at 2309.860 kb on - strand, within MPMX26_02245at 2309.866 kb on - strand, within MPMX26_02245at 2309.866 kb on - strand, within MPMX26_02245at 2309.902 kb on - strand, within MPMX26_02245at 2309.902 kb on - strand, within MPMX26_02245at 2309.911 kb on - strand, within MPMX26_02245

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
remove
2,307,303 - +0.1
2,307,813 - MPMX26_02244 0.36 -1.7
2,308,271 - MPMX26_02244 0.63 -0.1
2,309,342 - -0.2
2,309,342 - +0.2
2,309,353 - -0.4
2,309,353 - +0.4
2,309,353 - -1.4
2,309,353 - +0.2
2,309,353 - -0.3
2,309,353 - -0.1
2,309,353 - +0.2
2,309,353 - -0.2
2,309,353 - -0.3
2,309,353 - +0.6
2,309,353 - -1.3
2,309,353 - -1.2
2,309,353 - -0.1
2,309,368 - -1.5
2,309,368 - +0.4
2,309,375 - -0.0
2,309,380 - -0.4
2,309,380 - -0.8
2,309,395 - -0.6
2,309,405 - -0.9
2,309,405 - -0.4
2,309,405 - -0.2
2,309,415 - MPMX26_02245 0.11 +0.1
2,309,415 - MPMX26_02245 0.11 +3.8
2,309,415 - MPMX26_02245 0.11 +0.9
2,309,420 - MPMX26_02245 0.12 +0.1
2,309,473 - MPMX26_02245 0.19 +0.6
2,309,483 - MPMX26_02245 0.20 +0.5
2,309,503 - MPMX26_02245 0.22 -0.3
2,309,530 - MPMX26_02245 0.26 +0.2
2,309,537 - MPMX26_02245 0.27 -0.1
2,309,542 - MPMX26_02245 0.27 +0.3
2,309,542 - MPMX26_02245 0.27 -0.1
2,309,542 - MPMX26_02245 0.27 -0.2
2,309,547 - MPMX26_02245 0.28 +0.1
2,309,547 - MPMX26_02245 0.28 -1.3
2,309,547 - MPMX26_02245 0.28 +0.2
2,309,547 - MPMX26_02245 0.28 +0.6
2,309,547 - MPMX26_02245 0.28 +0.5
2,309,547 - MPMX26_02245 0.28 -0.1
2,309,552 - MPMX26_02245 0.29 -0.1
2,309,570 - MPMX26_02245 0.31 +0.2
2,309,594 - MPMX26_02245 0.34 -0.0
2,309,594 - MPMX26_02245 0.34 +0.1
2,309,599 - MPMX26_02245 0.34 +0.2
2,309,626 - MPMX26_02245 0.38 +0.4
2,309,626 - MPMX26_02245 0.38 +0.0
2,309,648 - MPMX26_02245 0.41 -0.6
2,309,653 - MPMX26_02245 0.41 -0.2
2,309,653 - MPMX26_02245 0.41 +0.2
2,309,653 - MPMX26_02245 0.41 +0.2
2,309,653 - MPMX26_02245 0.41 +0.1
2,309,653 - MPMX26_02245 0.41 +0.2
2,309,653 - MPMX26_02245 0.41 +0.0
2,309,660 - MPMX26_02245 0.42 +0.1
2,309,662 - MPMX26_02245 0.42 +0.2
2,309,713 - MPMX26_02245 0.49 +0.3
2,309,713 - MPMX26_02245 0.49 +0.0
2,309,772 - MPMX26_02245 0.56 +0.7
2,309,779 - MPMX26_02245 0.57 -0.8
2,309,792 - MPMX26_02245 0.59 +0.1
2,309,810 - MPMX26_02245 0.61 +1.2
2,309,858 - MPMX26_02245 0.67 -0.2
2,309,858 - MPMX26_02245 0.67 +0.4
2,309,858 - MPMX26_02245 0.67 +0.0
2,309,858 - MPMX26_02245 0.67 -0.1
2,309,858 - MPMX26_02245 0.67 -0.1
2,309,858 - MPMX26_02245 0.67 +0.3
2,309,860 - MPMX26_02245 0.68 +0.4
2,309,866 - MPMX26_02245 0.68 +0.0
2,309,866 - MPMX26_02245 0.68 -0.0
2,309,902 - MPMX26_02245 0.73 -0.9
2,309,902 - MPMX26_02245 0.73 -0.2
2,309,911 - MPMX26_02245 0.74 -0.9

Or see this region's nucleotide sequence