Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01959

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01958 and MPMX26_01959 are separated by 152 nucleotidesMPMX26_01959 and MPMX26_01960 overlap by 8 nucleotidesMPMX26_01960 and MPMX26_01961 are separated by 94 nucleotides MPMX26_01958: MPMX26_01958 - hypothetical protein, at 2,013,844 to 2,014,686 _01958 MPMX26_01959: MPMX26_01959 - Putative acetyltransferase, at 2,014,839 to 2,015,456 _01959 MPMX26_01960: MPMX26_01960 - IMPACT family member YigZ, at 2,015,449 to 2,016,045 _01960 MPMX26_01961: MPMX26_01961 - Type I secretion system membrane fusion protein PrsE, at 2,016,140 to 2,017,330 _01961 Position (kb) 2014 2015 2016Strain fitness (log2 ratio) -1 0 1 2 3at 2013.928 kb on - strandat 2014.120 kb on - strand, within MPMX26_01958at 2014.134 kb on - strand, within MPMX26_01958at 2014.297 kb on - strand, within MPMX26_01958at 2014.626 kb on - strandat 2014.920 kb on - strand, within MPMX26_01959at 2015.100 kb on - strand, within MPMX26_01959at 2015.270 kb on - strand, within MPMX26_01959at 2015.330 kb on - strand, within MPMX26_01959at 2015.358 kb on - strand, within MPMX26_01959at 2015.385 kb on - strand, within MPMX26_01959at 2015.385 kb on - strand, within MPMX26_01959at 2015.709 kb on - strand, within MPMX26_01960at 2015.712 kb on - strand, within MPMX26_01960at 2015.728 kb on - strand, within MPMX26_01960at 2015.728 kb on - strand, within MPMX26_01960at 2015.902 kb on - strand, within MPMX26_01960at 2015.907 kb on - strand, within MPMX26_01960at 2015.907 kb on - strand, within MPMX26_01960at 2015.910 kb on - strand, within MPMX26_01960at 2015.917 kb on - strand, within MPMX26_01960at 2015.917 kb on - strand, within MPMX26_01960

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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2,013,928 - +1.0
2,014,120 - MPMX26_01958 0.33 +1.2
2,014,134 - MPMX26_01958 0.34 +2.2
2,014,297 - MPMX26_01958 0.54 +0.3
2,014,626 - +1.5
2,014,920 - MPMX26_01959 0.13 +0.2
2,015,100 - MPMX26_01959 0.42 +1.4
2,015,270 - MPMX26_01959 0.70 +1.4
2,015,330 - MPMX26_01959 0.79 -1.0
2,015,358 - MPMX26_01959 0.84 +1.2
2,015,385 - MPMX26_01959 0.88 +2.8
2,015,385 - MPMX26_01959 0.88 -0.1
2,015,709 - MPMX26_01960 0.44 +0.6
2,015,712 - MPMX26_01960 0.44 +1.4
2,015,728 - MPMX26_01960 0.47 -0.2
2,015,728 - MPMX26_01960 0.47 +0.2
2,015,902 - MPMX26_01960 0.76 -0.9
2,015,907 - MPMX26_01960 0.77 -0.8
2,015,907 - MPMX26_01960 0.77 +0.0
2,015,910 - MPMX26_01960 0.77 -0.8
2,015,917 - MPMX26_01960 0.78 +0.4
2,015,917 - MPMX26_01960 0.78 +0.8

Or see this region's nucleotide sequence