Experiment: no UV control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01958 and MPMX26_01959 are separated by 152 nucleotides MPMX26_01959 and MPMX26_01960 overlap by 8 nucleotides MPMX26_01960 and MPMX26_01961 are separated by 94 nucleotides
MPMX26_01958: MPMX26_01958 - hypothetical protein, at 2,013,844 to 2,014,686
_01958
MPMX26_01959: MPMX26_01959 - Putative acetyltransferase, at 2,014,839 to 2,015,456
_01959
MPMX26_01960: MPMX26_01960 - IMPACT family member YigZ, at 2,015,449 to 2,016,045
_01960
MPMX26_01961: MPMX26_01961 - Type I secretion system membrane fusion protein PrsE, at 2,016,140 to 2,017,330
_01961
Position (kb)
2014
2015
2016 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2013.928 kb on - strand at 2014.120 kb on - strand, within MPMX26_01958 at 2014.134 kb on - strand, within MPMX26_01958 at 2014.297 kb on - strand, within MPMX26_01958 at 2014.626 kb on - strand at 2014.920 kb on - strand, within MPMX26_01959 at 2015.100 kb on - strand, within MPMX26_01959 at 2015.270 kb on - strand, within MPMX26_01959 at 2015.330 kb on - strand, within MPMX26_01959 at 2015.358 kb on - strand, within MPMX26_01959 at 2015.385 kb on - strand, within MPMX26_01959 at 2015.385 kb on - strand, within MPMX26_01959 at 2015.709 kb on - strand, within MPMX26_01960 at 2015.712 kb on - strand, within MPMX26_01960 at 2015.728 kb on - strand, within MPMX26_01960 at 2015.728 kb on - strand, within MPMX26_01960 at 2015.902 kb on - strand, within MPMX26_01960 at 2015.907 kb on - strand, within MPMX26_01960 at 2015.907 kb on - strand, within MPMX26_01960 at 2015.910 kb on - strand, within MPMX26_01960 at 2015.917 kb on - strand, within MPMX26_01960 at 2015.917 kb on - strand, within MPMX26_01960
Per-strain Table
Position Strand Gene LocusTag Fraction no UV control remove 2,013,928 - +1.0 2,014,120 - MPMX26_01958 0.33 +1.2 2,014,134 - MPMX26_01958 0.34 +2.2 2,014,297 - MPMX26_01958 0.54 +0.3 2,014,626 - +1.5 2,014,920 - MPMX26_01959 0.13 +0.2 2,015,100 - MPMX26_01959 0.42 +1.4 2,015,270 - MPMX26_01959 0.70 +1.4 2,015,330 - MPMX26_01959 0.79 -1.0 2,015,358 - MPMX26_01959 0.84 +1.2 2,015,385 - MPMX26_01959 0.88 +2.8 2,015,385 - MPMX26_01959 0.88 -0.1 2,015,709 - MPMX26_01960 0.44 +0.6 2,015,712 - MPMX26_01960 0.44 +1.4 2,015,728 - MPMX26_01960 0.47 -0.2 2,015,728 - MPMX26_01960 0.47 +0.2 2,015,902 - MPMX26_01960 0.76 -0.9 2,015,907 - MPMX26_01960 0.77 -0.8 2,015,907 - MPMX26_01960 0.77 +0.0 2,015,910 - MPMX26_01960 0.77 -0.8 2,015,917 - MPMX26_01960 0.78 +0.4 2,015,917 - MPMX26_01960 0.78 +0.8
Or see this region's nucleotide sequence