Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00603

Experiment: no UV control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00602 and MPMX26_00603 are separated by 67 nucleotidesMPMX26_00603 and MPMX26_00604 are separated by 235 nucleotides MPMX26_00602: MPMX26_00602 - hypothetical protein, at 634,341 to 635,177 _00602 MPMX26_00603: MPMX26_00603 - Cardiolipin synthase C, at 635,245 to 636,744 _00603 MPMX26_00604: MPMX26_00604 - 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, at 636,980 to 637,990 _00604 Position (kb) 635 636 637Strain fitness (log2 ratio) -2 -1 0 1 2 3at 634.361 kb on + strandat 634.361 kb on + strandat 634.361 kb on + strandat 634.389 kb on + strandat 634.389 kb on + strandat 634.389 kb on + strandat 634.389 kb on + strandat 634.444 kb on + strand, within MPMX26_00602at 634.444 kb on + strand, within MPMX26_00602at 634.444 kb on + strand, within MPMX26_00602at 634.444 kb on + strand, within MPMX26_00602at 634.444 kb on + strand, within MPMX26_00602at 634.502 kb on + strand, within MPMX26_00602at 634.525 kb on + strand, within MPMX26_00602at 634.528 kb on + strand, within MPMX26_00602at 634.554 kb on + strand, within MPMX26_00602at 634.588 kb on + strand, within MPMX26_00602at 634.593 kb on + strand, within MPMX26_00602at 634.593 kb on + strand, within MPMX26_00602at 634.705 kb on + strand, within MPMX26_00602at 634.705 kb on + strand, within MPMX26_00602at 634.705 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.710 kb on + strand, within MPMX26_00602at 634.715 kb on + strand, within MPMX26_00602at 634.724 kb on + strand, within MPMX26_00602at 634.724 kb on + strand, within MPMX26_00602at 634.757 kb on + strand, within MPMX26_00602at 634.762 kb on + strand, within MPMX26_00602at 634.764 kb on + strand, within MPMX26_00602at 634.846 kb on + strand, within MPMX26_00602at 634.867 kb on + strand, within MPMX26_00602at 634.902 kb on + strand, within MPMX26_00602at 634.922 kb on - strand, within MPMX26_00602at 634.926 kb on + strand, within MPMX26_00602at 634.931 kb on + strand, within MPMX26_00602at 635.004 kb on + strand, within MPMX26_00602at 635.004 kb on + strand, within MPMX26_00602at 635.032 kb on + strand, within MPMX26_00602at 635.038 kb on + strand, within MPMX26_00602at 635.077 kb on + strand, within MPMX26_00602at 635.085 kb on + strand, within MPMX26_00602at 635.085 kb on + strand, within MPMX26_00602at 635.090 kb on + strand, within MPMX26_00602at 635.106 kb on + strandat 635.114 kb on + strandat 635.118 kb on + strandat 635.118 kb on + strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.275 kb on - strandat 635.280 kb on - strandat 635.293 kb on - strandat 635.332 kb on - strandat 635.392 kb on - strandat 635.449 kb on - strand, within MPMX26_00603at 635.469 kb on - strand, within MPMX26_00603at 635.586 kb on - strand, within MPMX26_00603at 635.586 kb on - strand, within MPMX26_00603at 635.598 kb on - strand, within MPMX26_00603at 635.665 kb on - strand, within MPMX26_00603at 635.681 kb on - strand, within MPMX26_00603at 635.703 kb on - strand, within MPMX26_00603at 635.727 kb on - strand, within MPMX26_00603at 635.738 kb on - strand, within MPMX26_00603at 635.755 kb on - strand, within MPMX26_00603at 635.755 kb on - strand, within MPMX26_00603at 635.755 kb on - strand, within MPMX26_00603at 635.761 kb on - strand, within MPMX26_00603at 635.761 kb on - strand, within MPMX26_00603at 635.761 kb on - strand, within MPMX26_00603at 635.790 kb on - strand, within MPMX26_00603at 635.855 kb on - strand, within MPMX26_00603at 635.855 kb on - strand, within MPMX26_00603at 635.855 kb on - strand, within MPMX26_00603at 635.867 kb on - strand, within MPMX26_00603at 635.867 kb on - strand, within MPMX26_00603at 635.944 kb on - strand, within MPMX26_00603at 636.032 kb on - strand, within MPMX26_00603at 636.042 kb on - strand, within MPMX26_00603at 636.099 kb on - strand, within MPMX26_00603at 636.144 kb on - strand, within MPMX26_00603at 636.157 kb on - strand, within MPMX26_00603at 636.186 kb on - strand, within MPMX26_00603at 636.186 kb on - strand, within MPMX26_00603at 636.213 kb on - strand, within MPMX26_00603at 636.223 kb on - strand, within MPMX26_00603at 636.282 kb on - strand, within MPMX26_00603at 636.372 kb on - strand, within MPMX26_00603at 636.478 kb on + strand, within MPMX26_00603at 636.486 kb on - strand, within MPMX26_00603at 636.486 kb on - strand, within MPMX26_00603at 636.486 kb on - strand, within MPMX26_00603at 636.486 kb on - strand, within MPMX26_00603at 636.486 kb on - strand, within MPMX26_00603at 636.513 kb on - strand, within MPMX26_00603at 636.513 kb on - strand, within MPMX26_00603at 636.519 kb on + strand, within MPMX26_00603at 636.535 kb on - strand, within MPMX26_00603at 636.564 kb on - strand, within MPMX26_00603at 636.564 kb on - strand, within MPMX26_00603at 636.603 kb on - strandat 636.603 kb on - strandat 636.622 kb on - strandat 636.631 kb on - strandat 636.636 kb on - strandat 636.636 kb on - strandat 636.636 kb on - strandat 636.636 kb on - strandat 636.636 kb on - strandat 636.649 kb on - strandat 636.675 kb on - strandat 636.675 kb on - strandat 636.675 kb on - strandat 636.675 kb on - strandat 636.705 kb on - strandat 636.732 kb on - strandat 636.754 kb on - strandat 636.754 kb on - strandat 636.769 kb on - strandat 636.774 kb on - strandat 636.774 kb on - strandat 636.774 kb on - strandat 636.788 kb on + strandat 637.036 kb on + strandat 637.036 kb on + strandat 637.172 kb on + strand, within MPMX26_00604at 637.205 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.229 kb on + strand, within MPMX26_00604at 637.259 kb on + strand, within MPMX26_00604at 637.321 kb on + strand, within MPMX26_00604at 637.343 kb on + strand, within MPMX26_00604at 637.442 kb on + strand, within MPMX26_00604at 637.450 kb on + strand, within MPMX26_00604at 637.498 kb on + strand, within MPMX26_00604at 637.508 kb on + strand, within MPMX26_00604at 637.541 kb on + strand, within MPMX26_00604at 637.543 kb on + strand, within MPMX26_00604at 637.543 kb on + strand, within MPMX26_00604at 637.543 kb on + strand, within MPMX26_00604at 637.543 kb on + strand, within MPMX26_00604at 637.543 kb on + strand, within MPMX26_00604at 637.559 kb on + strand, within MPMX26_00604at 637.580 kb on + strand, within MPMX26_00604at 637.588 kb on + strand, within MPMX26_00604at 637.588 kb on + strand, within MPMX26_00604at 637.588 kb on + strand, within MPMX26_00604at 637.645 kb on + strand, within MPMX26_00604at 637.653 kb on - strand, within MPMX26_00604at 637.655 kb on + strand, within MPMX26_00604at 637.691 kb on + strand, within MPMX26_00604at 637.691 kb on + strand, within MPMX26_00604at 637.697 kb on + strand, within MPMX26_00604at 637.708 kb on + strand, within MPMX26_00604at 637.708 kb on + strand, within MPMX26_00604

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Per-strain Table

Position Strand Gene LocusTag Fraction no UV control
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634,361 + +0.3
634,361 + +0.4
634,361 + -0.5
634,389 + -0.4
634,389 + +0.8
634,389 + -0.2
634,389 + +0.5
634,444 + MPMX26_00602 0.12 -0.7
634,444 + MPMX26_00602 0.12 +1.0
634,444 + MPMX26_00602 0.12 +1.1
634,444 + MPMX26_00602 0.12 +0.2
634,444 + MPMX26_00602 0.12 +0.9
634,502 + MPMX26_00602 0.19 +0.2
634,525 + MPMX26_00602 0.22 +0.2
634,528 + MPMX26_00602 0.22 +0.3
634,554 + MPMX26_00602 0.25 -0.5
634,588 + MPMX26_00602 0.30 -0.2
634,593 + MPMX26_00602 0.30 +0.1
634,593 + MPMX26_00602 0.30 -0.1
634,705 + MPMX26_00602 0.43 +0.4
634,705 + MPMX26_00602 0.43 -0.1
634,705 + MPMX26_00602 0.43 -0.0
634,710 + MPMX26_00602 0.44 +0.1
634,710 + MPMX26_00602 0.44 -0.9
634,710 + MPMX26_00602 0.44 -0.2
634,710 + MPMX26_00602 0.44 -0.5
634,710 + MPMX26_00602 0.44 +0.2
634,710 + MPMX26_00602 0.44 -0.2
634,710 + MPMX26_00602 0.44 -0.1
634,710 + MPMX26_00602 0.44 +0.3
634,715 + MPMX26_00602 0.45 +0.4
634,724 + MPMX26_00602 0.46 +0.4
634,724 + MPMX26_00602 0.46 +0.2
634,757 + MPMX26_00602 0.50 +0.7
634,762 + MPMX26_00602 0.50 -0.2
634,764 + MPMX26_00602 0.51 +0.0
634,846 + MPMX26_00602 0.60 +0.7
634,867 + MPMX26_00602 0.63 -1.2
634,902 + MPMX26_00602 0.67 +0.0
634,922 - MPMX26_00602 0.69 +0.3
634,926 + MPMX26_00602 0.70 -0.3
634,931 + MPMX26_00602 0.70 +0.5
635,004 + MPMX26_00602 0.79 -0.2
635,004 + MPMX26_00602 0.79 -0.1
635,032 + MPMX26_00602 0.83 -0.1
635,038 + MPMX26_00602 0.83 -0.5
635,077 + MPMX26_00602 0.88 +0.1
635,085 + MPMX26_00602 0.89 +0.3
635,085 + MPMX26_00602 0.89 -0.2
635,090 + MPMX26_00602 0.89 +0.1
635,106 + -0.1
635,114 + +0.0
635,118 + -0.2
635,118 + +0.1
635,275 - +0.3
635,275 - +0.1
635,275 - +1.0
635,275 - -0.3
635,275 - -1.3
635,275 - -2.3
635,275 - -0.5
635,275 - -0.6
635,280 - -0.4
635,293 - -0.8
635,332 - -0.3
635,392 - -0.0
635,449 - MPMX26_00603 0.14 -0.4
635,469 - MPMX26_00603 0.15 -0.4
635,586 - MPMX26_00603 0.23 -1.4
635,586 - MPMX26_00603 0.23 +0.1
635,598 - MPMX26_00603 0.24 -0.8
635,665 - MPMX26_00603 0.28 +0.6
635,681 - MPMX26_00603 0.29 +0.2
635,703 - MPMX26_00603 0.31 -1.3
635,727 - MPMX26_00603 0.32 +0.3
635,738 - MPMX26_00603 0.33 +0.0
635,755 - MPMX26_00603 0.34 -0.6
635,755 - MPMX26_00603 0.34 +0.0
635,755 - MPMX26_00603 0.34 +0.4
635,761 - MPMX26_00603 0.34 -0.2
635,761 - MPMX26_00603 0.34 -0.4
635,761 - MPMX26_00603 0.34 +0.3
635,790 - MPMX26_00603 0.36 +0.6
635,855 - MPMX26_00603 0.41 +1.1
635,855 - MPMX26_00603 0.41 -0.4
635,855 - MPMX26_00603 0.41 -0.6
635,867 - MPMX26_00603 0.41 -0.6
635,867 - MPMX26_00603 0.41 +0.5
635,944 - MPMX26_00603 0.47 -1.0
636,032 - MPMX26_00603 0.52 +0.5
636,042 - MPMX26_00603 0.53 -0.0
636,099 - MPMX26_00603 0.57 -0.3
636,144 - MPMX26_00603 0.60 +0.6
636,157 - MPMX26_00603 0.61 -1.0
636,186 - MPMX26_00603 0.63 -0.2
636,186 - MPMX26_00603 0.63 -1.0
636,213 - MPMX26_00603 0.65 -0.2
636,223 - MPMX26_00603 0.65 -2.5
636,282 - MPMX26_00603 0.69 -0.7
636,372 - MPMX26_00603 0.75 -0.1
636,478 + MPMX26_00603 0.82 +1.2
636,486 - MPMX26_00603 0.83 -0.1
636,486 - MPMX26_00603 0.83 -0.4
636,486 - MPMX26_00603 0.83 -0.2
636,486 - MPMX26_00603 0.83 -0.3
636,486 - MPMX26_00603 0.83 -0.5
636,513 - MPMX26_00603 0.85 -0.1
636,513 - MPMX26_00603 0.85 +0.3
636,519 + MPMX26_00603 0.85 +0.2
636,535 - MPMX26_00603 0.86 +3.2
636,564 - MPMX26_00603 0.88 -1.7
636,564 - MPMX26_00603 0.88 +0.4
636,603 - -0.3
636,603 - +0.1
636,622 - -0.2
636,631 - -0.1
636,636 - +1.0
636,636 - -0.0
636,636 - +0.2
636,636 - +0.3
636,636 - +0.1
636,649 - -0.6
636,675 - -1.8
636,675 - +0.3
636,675 - +0.9
636,675 - -0.9
636,705 - +0.3
636,732 - -1.5
636,754 - +0.5
636,754 - +0.0
636,769 - +0.3
636,774 - +0.2
636,774 - -0.0
636,774 - -0.3
636,788 + -0.5
637,036 + -0.1
637,036 + -0.6
637,172 + MPMX26_00604 0.19 +0.4
637,205 + MPMX26_00604 0.22 -1.3
637,229 + MPMX26_00604 0.25 +0.4
637,229 + MPMX26_00604 0.25 -1.5
637,229 + MPMX26_00604 0.25 +0.5
637,229 + MPMX26_00604 0.25 +0.3
637,229 + MPMX26_00604 0.25 +0.7
637,229 + MPMX26_00604 0.25 -0.4
637,229 + MPMX26_00604 0.25 +0.6
637,229 + MPMX26_00604 0.25 +0.6
637,229 + MPMX26_00604 0.25 +0.3
637,229 + MPMX26_00604 0.25 +0.5
637,229 + MPMX26_00604 0.25 +1.6
637,229 + MPMX26_00604 0.25 -1.4
637,229 + MPMX26_00604 0.25 +0.4
637,259 + MPMX26_00604 0.28 +1.5
637,321 + MPMX26_00604 0.34 +0.1
637,343 + MPMX26_00604 0.36 +0.6
637,442 + MPMX26_00604 0.46 -1.0
637,450 + MPMX26_00604 0.46 -0.1
637,498 + MPMX26_00604 0.51 +0.8
637,508 + MPMX26_00604 0.52 -0.1
637,541 + MPMX26_00604 0.55 +0.5
637,543 + MPMX26_00604 0.56 -0.6
637,543 + MPMX26_00604 0.56 -0.2
637,543 + MPMX26_00604 0.56 -0.4
637,543 + MPMX26_00604 0.56 -0.1
637,543 + MPMX26_00604 0.56 +0.8
637,559 + MPMX26_00604 0.57 +0.6
637,580 + MPMX26_00604 0.59 -1.2
637,588 + MPMX26_00604 0.60 +0.6
637,588 + MPMX26_00604 0.60 -0.8
637,588 + MPMX26_00604 0.60 -0.7
637,645 + MPMX26_00604 0.66 +0.9
637,653 - MPMX26_00604 0.67 +0.8
637,655 + MPMX26_00604 0.67 +0.4
637,691 + MPMX26_00604 0.70 -0.5
637,691 + MPMX26_00604 0.70 +0.3
637,697 + MPMX26_00604 0.71 -0.2
637,708 + MPMX26_00604 0.72 +0.2
637,708 + MPMX26_00604 0.72 +3.2

Or see this region's nucleotide sequence