Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02858

Experiment: TSB with Dermcidin 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 2 ug/mL
2,946,534	+		MPMX26_02856	0.38	+0.6
2,946,708	+		MPMX26_02856	0.55	+0.9
2,946,753	+		MPMX26_02856	0.59	+2.9
2,946,763	+		MPMX26_02856	0.60	-1.2
2,946,805	+		MPMX26_02856	0.65	-0.9
2,946,847	+		MPMX26_02856	0.69	-0.1
2,947,024	+		MPMX26_02856	0.86	-1.4
2,947,024	+		MPMX26_02856	0.86	+0.7
2,947,101	+				-0.7
2,947,111	+				-0.6
2,947,111	+				-0.3
2,947,111	+				+1.5
2,947,119	-				-1.0
2,947,119	-				+2.5
2,947,119	-				+0.2
2,947,119	-				+0.6
2,947,119	-				-1.3
2,947,119	-				-0.6
2,947,119	-				+2.5
2,947,123	+				-0.8
2,947,131	-				+0.1
2,947,147	-				+0.6
2,947,233	-		MPMX26_02857	0.13	-0.5
2,947,240	-		MPMX26_02857	0.15	-0.5
2,947,282	-		MPMX26_02857	0.32	-1.0
2,947,314	-		MPMX26_02857	0.44	-0.7
2,947,325	-		MPMX26_02857	0.49	-1.1
2,947,325	-		MPMX26_02857	0.49	-2.9
2,947,330	-		MPMX26_02857	0.51	-0.3
2,947,360	-		MPMX26_02857	0.62	-0.6
2,947,370	-		MPMX26_02857	0.66	-0.6
2,947,370	-		MPMX26_02857	0.66	-1.3
2,947,404	-		MPMX26_02857	0.80	-1.4
2,947,404	-		MPMX26_02857	0.80	-0.8
2,947,441	-				-0.6
2,947,441	-				-0.7
2,947,463	-				+0.5
2,947,473	-				+1.0
2,947,482	-				-0.2
2,947,487	-				-1.2
2,947,487	-				-0.1
2,947,487	-				+0.5
2,947,487	-				+0.1
2,947,487	-				-0.8
2,947,489	-				-0.2
2,947,489	-				-0.7
2,947,514	-				-0.4
2,947,568	-				-0.5
2,947,583	-				-0.7
2,947,625	-		MPMX26_02858	0.10	+0.3
2,947,625	-		MPMX26_02858	0.10	+0.3
2,947,625	-		MPMX26_02858	0.10	-0.1
2,947,625	-		MPMX26_02858	0.10	-0.7
2,947,625	-		MPMX26_02858	0.10	-0.5
2,947,625	-		MPMX26_02858	0.10	+0.2
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	-0.1
2,947,625	-		MPMX26_02858	0.10	-1.5
2,947,625	-		MPMX26_02858	0.10	-0.5
2,947,625	-		MPMX26_02858	0.10	-0.3
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	+0.5
2,947,625	-		MPMX26_02858	0.10	-0.6
2,947,625	-		MPMX26_02858	0.10	-1.1
2,947,625	-		MPMX26_02858	0.10	+0.4
2,947,625	-		MPMX26_02858	0.10	-0.3
2,947,625	-		MPMX26_02858	0.10	-1.4
2,947,625	-		MPMX26_02858	0.10	+0.2
2,947,625	-		MPMX26_02858	0.10	+0.6
2,947,625	-		MPMX26_02858	0.10	-0.4
2,947,625	-		MPMX26_02858	0.10	-0.7
2,947,625	-		MPMX26_02858	0.10	+0.1
2,947,625	-		MPMX26_02858	0.10	-0.3
2,947,625	-		MPMX26_02858	0.10	+0.2
2,947,625	-		MPMX26_02858	0.10	-0.2
2,947,635	-		MPMX26_02858	0.11	+0.3
2,947,676	-		MPMX26_02858	0.15	+0.0
2,947,739	-		MPMX26_02858	0.21	-0.3
2,947,739	-		MPMX26_02858	0.21	-0.5
2,947,739	-		MPMX26_02858	0.21	-0.9
2,947,739	-		MPMX26_02858	0.21	-2.0
2,947,739	-		MPMX26_02858	0.21	+0.3
2,947,739	-		MPMX26_02858	0.21	-1.1
2,947,739	-		MPMX26_02858	0.21	-0.3
2,947,739	-		MPMX26_02858	0.21	-0.0
2,947,739	-		MPMX26_02858	0.21	-1.3
2,947,739	-		MPMX26_02858	0.21	-1.3
2,947,739	-		MPMX26_02858	0.21	+0.4
2,947,739	-		MPMX26_02858	0.21	+0.0
2,947,739	-		MPMX26_02858	0.21	-1.5
2,947,739	-		MPMX26_02858	0.21	-1.7
2,947,739	-		MPMX26_02858	0.21	-1.9
2,947,739	-		MPMX26_02858	0.21	+0.3
2,947,739	-		MPMX26_02858	0.21	-0.6
2,947,739	-		MPMX26_02858	0.21	-1.1
2,947,739	-		MPMX26_02858	0.21	-0.3
2,947,739	-		MPMX26_02858	0.21	-1.2
2,947,739	-		MPMX26_02858	0.21	-1.1
2,947,853	-		MPMX26_02858	0.32	+0.7
2,947,853	-		MPMX26_02858	0.32	-0.6
2,947,895	-		MPMX26_02858	0.35	-0.1
2,947,898	-		MPMX26_02858	0.36	-0.2
2,947,898	-		MPMX26_02858	0.36	-1.5
2,947,898	-		MPMX26_02858	0.36	-0.2
2,947,925	-		MPMX26_02858	0.38	+1.3
2,947,925	-		MPMX26_02858	0.38	+0.2
2,947,925	-		MPMX26_02858	0.38	-0.6
2,947,925	-		MPMX26_02858	0.38	-1.2
2,947,925	-		MPMX26_02858	0.38	-1.5
2,947,930	-		MPMX26_02858	0.39	+0.3
2,947,949	-		MPMX26_02858	0.41	+1.2
2,947,949	-		MPMX26_02858	0.41	+1.6
2,947,949	-		MPMX26_02858	0.41	+0.1
2,947,949	-		MPMX26_02858	0.41	-1.3
2,947,949	-		MPMX26_02858	0.41	+0.2
2,947,949	-		MPMX26_02858	0.41	-0.1
2,947,959	-		MPMX26_02858	0.41	-0.7
2,947,959	-		MPMX26_02858	0.41	-0.4
2,947,959	-		MPMX26_02858	0.41	-0.6
2,947,959	-		MPMX26_02858	0.41	-0.9
2,947,959	-		MPMX26_02858	0.41	-0.4
2,947,959	-		MPMX26_02858	0.41	-1.4
2,947,996	-		MPMX26_02858	0.45	-2.2
2,947,996	-		MPMX26_02858	0.45	-0.6
2,948,015	-		MPMX26_02858	0.47	-0.0
2,948,015	-		MPMX26_02858	0.47	-0.4
2,948,048	-		MPMX26_02858	0.50	-0.4
2,948,048	-		MPMX26_02858	0.50	+0.4
2,948,048	-		MPMX26_02858	0.50	+0.1
2,948,052	-		MPMX26_02858	0.50	-1.1
2,948,125	-		MPMX26_02858	0.57	-0.6
2,948,125	-		MPMX26_02858	0.57	-0.8
2,948,130	-		MPMX26_02858	0.57	+0.6
2,948,130	-		MPMX26_02858	0.57	+0.6
2,948,130	-		MPMX26_02858	0.57	+1.7
2,948,138	-		MPMX26_02858	0.58	-0.7
2,948,138	-		MPMX26_02858	0.58	+0.3
2,948,174	-		MPMX26_02858	0.61	-1.2
2,948,174	-		MPMX26_02858	0.61	+0.5
2,948,176	-		MPMX26_02858	0.62	-1.4
2,948,176	-		MPMX26_02858	0.62	-0.4
2,948,176	-		MPMX26_02858	0.62	-1.2
2,948,176	-		MPMX26_02858	0.62	-0.5
2,948,176	-		MPMX26_02858	0.62	+0.7
2,948,176	-		MPMX26_02858	0.62	+0.7
2,948,176	-		MPMX26_02858	0.62	+0.3
2,948,176	-		MPMX26_02858	0.62	+0.3
2,948,176	-		MPMX26_02858	0.62	+0.2
2,948,176	-		MPMX26_02858	0.62	-0.3
2,948,196	-		MPMX26_02858	0.64	-0.4
2,948,198	-		MPMX26_02858	0.64	-1.1
2,948,222	-		MPMX26_02858	0.66	+1.5
2,948,280	-		MPMX26_02858	0.71	-0.6
2,948,288	-		MPMX26_02858	0.72	-0.5
2,948,295	-		MPMX26_02858	0.73	+0.0
2,948,308	-		MPMX26_02858	0.74	+0.4
2,948,315	-		MPMX26_02858	0.75	-0.2
2,948,325	-		MPMX26_02858	0.76	-2.1
2,948,325	-		MPMX26_02858	0.76	+0.3
2,948,325	-		MPMX26_02858	0.76	-2.0
2,948,325	-		MPMX26_02858	0.76	-2.5
2,948,325	-		MPMX26_02858	0.76	-0.5
2,948,325	-		MPMX26_02858	0.76	+0.1
2,948,325	-		MPMX26_02858	0.76	-1.1
2,948,325	-		MPMX26_02858	0.76	-0.4
2,948,325	-		MPMX26_02858	0.76	-1.0
2,948,325	-		MPMX26_02858	0.76	-0.0
2,948,325	-		MPMX26_02858	0.76	-0.6
2,948,325	-		MPMX26_02858	0.76	-1.3
2,948,325	-		MPMX26_02858	0.76	-0.9
2,948,325	-		MPMX26_02858	0.76	+0.2
2,948,325	-		MPMX26_02858	0.76	-0.5
2,948,325	-		MPMX26_02858	0.76	+0.4
2,948,327	-		MPMX26_02858	0.76	-0.7
2,948,335	-		MPMX26_02858	0.76	-0.6
2,948,341	-		MPMX26_02858	0.77	-0.4
2,948,349	-		MPMX26_02858	0.78	-0.7
2,948,361	-		MPMX26_02858	0.79	+0.9
2,948,361	-		MPMX26_02858	0.79	-1.7
2,948,361	-		MPMX26_02858	0.79	+0.5
2,948,361	-		MPMX26_02858	0.79	-0.3
2,948,361	-		MPMX26_02858	0.79	-0.1
2,948,361	-		MPMX26_02858	0.79	+2.9
2,948,361	-		MPMX26_02858	0.79	+0.3
2,948,361	-		MPMX26_02858	0.79	-2.1
2,948,361	-		MPMX26_02858	0.79	+1.0
2,948,363	-		MPMX26_02858	0.79	-2.2
2,948,382	-		MPMX26_02858	0.81	-0.8
2,948,392	-		MPMX26_02858	0.82	-0.2
2,948,392	-		MPMX26_02858	0.82	+0.3
2,948,392	-		MPMX26_02858	0.82	+0.5
2,948,392	-		MPMX26_02858	0.82	-0.8
2,948,392	-		MPMX26_02858	0.82	+0.6
2,948,409	-		MPMX26_02858	0.83	-1.2
2,948,414	-		MPMX26_02858	0.84	-0.1
2,948,414	-		MPMX26_02858	0.84	-0.3
2,948,440	-		MPMX26_02858	0.86	+0.3
2,948,456	-		MPMX26_02858	0.88	-0.8
2,948,482	-				-0.9
2,948,501	-				+0.3
2,948,618	-				+1.2