Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02472 and MPMX26_02473 are separated by 113 nucleotides MPMX26_02473 and MPMX26_02474 are separated by 111 nucleotides MPMX26_02474 and MPMX26_02475 are separated by 301 nucleotides MPMX26_02475 and MPMX26_02476 are separated by 99 nucleotides
MPMX26_02472: MPMX26_02472 - hypothetical protein, at 2,558,115 to 2,559,158
_02472
MPMX26_02473: MPMX26_02473 - hypothetical protein, at 2,559,272 to 2,559,886
_02473
MPMX26_02474: MPMX26_02474 - hypothetical protein, at 2,559,998 to 2,560,162
_02474
MPMX26_02475: MPMX26_02475 - hypothetical protein, at 2,560,464 to 2,560,844
_02475
MPMX26_02476: MPMX26_02476 - Regulator of ribonuclease activity B, at 2,560,944 to 2,561,330
_02476
Position (kb)
2559
2560
2561 Strain fitness (log2 ratio)
-1
0
1
2 at 2559.349 kb on - strand, within MPMX26_02473 at 2559.401 kb on - strand, within MPMX26_02473 at 2559.452 kb on + strand, within MPMX26_02473 at 2559.503 kb on - strand, within MPMX26_02473 at 2559.547 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.728 kb on - strand, within MPMX26_02473 at 2559.743 kb on - strand, within MPMX26_02473 at 2559.743 kb on - strand, within MPMX26_02473 at 2559.758 kb on - strand, within MPMX26_02473 at 2559.766 kb on - strand, within MPMX26_02473 at 2559.832 kb on - strand at 2560.108 kb on - strand, within MPMX26_02474 at 2560.129 kb on - strand, within MPMX26_02474 at 2560.787 kb on - strand, within MPMX26_02475 at 2561.115 kb on - strand, within MPMX26_02476
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 2,559,349 - MPMX26_02473 0.13 +0.3 2,559,401 - MPMX26_02473 0.21 +0.3 2,559,452 + MPMX26_02473 0.29 -0.1 2,559,503 - MPMX26_02473 0.38 +1.6 2,559,547 - MPMX26_02473 0.45 +0.4 2,559,620 - MPMX26_02473 0.57 +0.3 2,559,620 - MPMX26_02473 0.57 +1.5 2,559,620 - MPMX26_02473 0.57 +0.1 2,559,620 - MPMX26_02473 0.57 +0.9 2,559,620 - MPMX26_02473 0.57 -1.1 2,559,620 - MPMX26_02473 0.57 +1.2 2,559,620 - MPMX26_02473 0.57 -1.1 2,559,715 - MPMX26_02473 0.72 +1.9 2,559,715 - MPMX26_02473 0.72 -0.7 2,559,715 - MPMX26_02473 0.72 -0.3 2,559,728 - MPMX26_02473 0.74 -0.7 2,559,743 - MPMX26_02473 0.77 -0.4 2,559,743 - MPMX26_02473 0.77 +1.3 2,559,758 - MPMX26_02473 0.79 -0.9 2,559,766 - MPMX26_02473 0.80 -0.9 2,559,832 - -0.3 2,560,108 - MPMX26_02474 0.67 -1.0 2,560,129 - MPMX26_02474 0.79 +0.1 2,560,787 - MPMX26_02475 0.85 -1.0 2,561,115 - MPMX26_02476 0.44 -0.4
Or see this region's nucleotide sequence