Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00755

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00754 and MPMX26_00755 are separated by 12 nucleotidesMPMX26_00755 and MPMX26_00756 are separated by 513 nucleotides MPMX26_00754: MPMX26_00754 - Succinate--CoA ligase [ADP-forming] subunit beta, at 794,337 to 795,503 _00754 MPMX26_00755: MPMX26_00755 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 795,516 to 796,406 _00755 MPMX26_00756: MPMX26_00756 - Tryptophan--tRNA ligase 2, at 796,920 to 797,933 _00756 Position (kb) 795 796 797Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.585 kb on + strand, within MPMX26_00754at 794.612 kb on + strand, within MPMX26_00754at 794.613 kb on + strand, within MPMX26_00754at 794.613 kb on + strand, within MPMX26_00754at 794.622 kb on + strand, within MPMX26_00754at 794.627 kb on + strand, within MPMX26_00754at 794.627 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.676 kb on + strand, within MPMX26_00754at 794.830 kb on + strand, within MPMX26_00754at 794.876 kb on + strand, within MPMX26_00754at 794.876 kb on + strand, within MPMX26_00754at 794.882 kb on + strand, within MPMX26_00754at 794.888 kb on + strand, within MPMX26_00754at 794.888 kb on + strand, within MPMX26_00754at 794.977 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.008 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.089 kb on + strand, within MPMX26_00754at 795.089 kb on + strand, within MPMX26_00754at 795.093 kb on + strand, within MPMX26_00754at 795.094 kb on + strand, within MPMX26_00754at 795.094 kb on + strand, within MPMX26_00754at 795.153 kb on + strand, within MPMX26_00754at 795.200 kb on + strand, within MPMX26_00754at 795.202 kb on + strand, within MPMX26_00754at 795.265 kb on + strand, within MPMX26_00754at 795.279 kb on + strand, within MPMX26_00754at 795.279 kb on + strand, within MPMX26_00754at 795.281 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.414 kb on + strandat 795.450 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.457 kb on + strandat 795.520 kb on + strandat 795.546 kb on + strandat 795.552 kb on + strandat 795.557 kb on + strandat 795.557 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.595 kb on + strandat 795.600 kb on + strandat 795.628 kb on + strand, within MPMX26_00755at 795.638 kb on + strand, within MPMX26_00755at 795.638 kb on + strand, within MPMX26_00755at 795.648 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.691 kb on + strand, within MPMX26_00755at 795.704 kb on + strand, within MPMX26_00755at 795.710 kb on + strand, within MPMX26_00755at 795.810 kb on + strand, within MPMX26_00755at 795.820 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.873 kb on + strand, within MPMX26_00755at 795.882 kb on + strand, within MPMX26_00755at 795.882 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.897 kb on + strand, within MPMX26_00755at 795.901 kb on + strand, within MPMX26_00755at 795.901 kb on + strand, within MPMX26_00755at 795.994 kb on + strand, within MPMX26_00755at 796.026 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.103 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.152 kb on + strand, within MPMX26_00755at 796.176 kb on + strand, within MPMX26_00755at 796.204 kb on + strand, within MPMX26_00755at 796.209 kb on + strand, within MPMX26_00755at 796.236 kb on + strand, within MPMX26_00755at 796.244 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.346 kb on + strandat 796.366 kb on + strandat 796.394 kb on + strandat 796.395 kb on + strandat 796.395 kb on + strandat 796.400 kb on + strandat 796.400 kb on + strandat 796.667 kb on - strandat 796.672 kb on - strandat 796.684 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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794,547 + MPMX26_00754 0.18 -1.5
794,547 + MPMX26_00754 0.18 -2.5
794,547 + MPMX26_00754 0.18 -3.0
794,547 + MPMX26_00754 0.18 +0.5
794,547 + MPMX26_00754 0.18 -2.3
794,547 + MPMX26_00754 0.18 -0.9
794,585 + MPMX26_00754 0.21 -2.3
794,612 + MPMX26_00754 0.24 -0.9
794,613 + MPMX26_00754 0.24 -2.6
794,613 + MPMX26_00754 0.24 -1.6
794,622 + MPMX26_00754 0.24 -2.7
794,627 + MPMX26_00754 0.25 -0.6
794,627 + MPMX26_00754 0.25 -1.0
794,639 + MPMX26_00754 0.26 -1.4
794,639 + MPMX26_00754 0.26 -0.8
794,639 + MPMX26_00754 0.26 +0.2
794,639 + MPMX26_00754 0.26 -0.3
794,639 + MPMX26_00754 0.26 +0.1
794,639 + MPMX26_00754 0.26 -0.6
794,639 + MPMX26_00754 0.26 +0.3
794,676 + MPMX26_00754 0.29 -2.6
794,830 + MPMX26_00754 0.42 +0.3
794,876 + MPMX26_00754 0.46 -0.8
794,876 + MPMX26_00754 0.46 -1.6
794,882 + MPMX26_00754 0.47 -0.3
794,888 + MPMX26_00754 0.47 -1.9
794,888 + MPMX26_00754 0.47 -0.0
794,977 + MPMX26_00754 0.55 +0.5
795,006 + MPMX26_00754 0.57 -1.5
795,006 + MPMX26_00754 0.57 +0.5
795,006 + MPMX26_00754 0.57 -2.5
795,008 + MPMX26_00754 0.57 -0.8
795,023 + MPMX26_00754 0.59 +1.9
795,023 + MPMX26_00754 0.59 -2.8
795,023 + MPMX26_00754 0.59 -1.5
795,089 + MPMX26_00754 0.64 -0.7
795,089 + MPMX26_00754 0.64 -1.9
795,093 + MPMX26_00754 0.65 -1.8
795,094 + MPMX26_00754 0.65 +1.3
795,094 + MPMX26_00754 0.65 +1.9
795,153 + MPMX26_00754 0.70 -1.3
795,200 + MPMX26_00754 0.74 -0.5
795,202 + MPMX26_00754 0.74 +0.9
795,265 + MPMX26_00754 0.80 +1.9
795,279 + MPMX26_00754 0.81 -2.0
795,279 + MPMX26_00754 0.81 -0.8
795,281 + MPMX26_00754 0.81 -3.7
795,301 + MPMX26_00754 0.83 +0.5
795,301 + MPMX26_00754 0.83 -2.0
795,301 + MPMX26_00754 0.83 +0.1
795,303 + MPMX26_00754 0.83 -1.3
795,303 + MPMX26_00754 0.83 -0.3
795,303 + MPMX26_00754 0.83 -3.6
795,303 + MPMX26_00754 0.83 -1.8
795,414 + -2.4
795,450 + -1.3
795,455 + -0.5
795,455 + -0.5
795,455 + -0.5
795,455 + +1.1
795,455 + +1.0
795,455 + -1.5
795,455 + -0.2
795,455 + -1.4
795,455 + -0.2
795,455 + +0.5
795,455 + -0.8
795,457 + -0.8
795,520 + -1.5
795,546 + -0.8
795,552 + -2.2
795,557 + -1.3
795,557 + -1.4
795,591 + -1.8
795,591 + -1.1
795,591 + -2.7
795,591 + -1.3
795,595 + +0.1
795,600 + -2.2
795,628 + MPMX26_00755 0.13 -0.2
795,638 + MPMX26_00755 0.14 -2.8
795,638 + MPMX26_00755 0.14 -2.7
795,648 + MPMX26_00755 0.15 +2.1
795,674 + MPMX26_00755 0.18 -1.2
795,674 + MPMX26_00755 0.18 -2.8
795,674 + MPMX26_00755 0.18 -2.4
795,674 + MPMX26_00755 0.18 -3.0
795,691 + MPMX26_00755 0.20 +0.3
795,704 + MPMX26_00755 0.21 +0.1
795,710 + MPMX26_00755 0.22 +1.9
795,810 + MPMX26_00755 0.33 -0.4
795,820 + MPMX26_00755 0.34 +0.9
795,830 + MPMX26_00755 0.35 +0.3
795,830 + MPMX26_00755 0.35 -3.3
795,830 + MPMX26_00755 0.35 -1.8
795,830 + MPMX26_00755 0.35 -1.8
795,873 + MPMX26_00755 0.40 -3.1
795,882 + MPMX26_00755 0.41 -2.3
795,882 + MPMX26_00755 0.41 +0.5
795,892 + MPMX26_00755 0.42 -1.7
795,892 + MPMX26_00755 0.42 -1.4
795,892 + MPMX26_00755 0.42 +0.1
795,897 + MPMX26_00755 0.43 -2.0
795,901 + MPMX26_00755 0.43 +0.5
795,901 + MPMX26_00755 0.43 +0.9
795,994 + MPMX26_00755 0.54 -0.8
796,026 + MPMX26_00755 0.57 -2.0
796,045 + MPMX26_00755 0.59 +2.9
796,045 + MPMX26_00755 0.59 +0.3
796,045 + MPMX26_00755 0.59 +0.3
796,103 + MPMX26_00755 0.66 -1.9
796,115 + MPMX26_00755 0.67 -2.2
796,115 + MPMX26_00755 0.67 -2.3
796,115 + MPMX26_00755 0.67 -0.8
796,152 + MPMX26_00755 0.71 -3.0
796,176 + MPMX26_00755 0.74 -1.2
796,204 + MPMX26_00755 0.77 -1.6
796,209 + MPMX26_00755 0.78 -0.2
796,236 + MPMX26_00755 0.81 -1.4
796,244 + MPMX26_00755 0.82 -2.7
796,251 + MPMX26_00755 0.82 -0.8
796,251 + MPMX26_00755 0.82 -1.9
796,251 + MPMX26_00755 0.82 -1.9
796,251 + MPMX26_00755 0.82 -2.2
796,251 + MPMX26_00755 0.82 -1.5
796,251 + MPMX26_00755 0.82 -0.3
796,251 + MPMX26_00755 0.82 -2.4
796,251 + MPMX26_00755 0.82 -1.2
796,251 + MPMX26_00755 0.82 -2.0
796,251 + MPMX26_00755 0.82 -1.2
796,346 + -2.4
796,366 + +0.5
796,394 + +1.0
796,395 + +0.0
796,395 + +0.1
796,400 + +1.5
796,400 + -0.2
796,667 - -0.5
796,672 - -0.6
796,684 - -0.4

Or see this region's nucleotide sequence