Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00646 and MPMX26_00647 are separated by 134 nucleotides MPMX26_00647 and MPMX26_00648 are separated by 36 nucleotides MPMX26_00648 and MPMX26_00649 are separated by 199 nucleotides
MPMX26_00646: MPMX26_00646 - Ribonuclease G, at 689,158 to 690,612
_00646
MPMX26_00647: MPMX26_00647 - hypothetical protein, at 690,747 to 690,920
_00647
MPMX26_00648: MPMX26_00648 - O-acyltransferase WSD, at 690,957 to 692,342
_00648
MPMX26_00649: MPMX26_00649 - Phosphoadenosine phosphosulfate reductase, at 692,542 to 693,276
_00649
Position (kb) 690
691
692
693 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 689.974 kb on + strand, within MPMX26_00646 at 689.974 kb on + strand, within MPMX26_00646 at 690.027 kb on + strand, within MPMX26_00646 at 690.027 kb on + strand, within MPMX26_00646 at 690.034 kb on + strand, within MPMX26_00646 at 690.054 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.062 kb on + strand, within MPMX26_00646 at 690.085 kb on + strand, within MPMX26_00646 at 690.337 kb on + strand, within MPMX26_00646 at 690.378 kb on + strand, within MPMX26_00646 at 690.476 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.484 kb on + strand at 690.495 kb on + strand at 690.498 kb on + strand at 690.576 kb on + strand at 690.576 kb on + strand at 690.688 kb on + strand at 690.698 kb on + strand at 690.718 kb on + strand at 690.718 kb on + strand at 690.851 kb on + strand, within MPMX26_00647 at 690.856 kb on + strand, within MPMX26_00647 at 690.876 kb on + strand, within MPMX26_00647 at 690.899 kb on + strand, within MPMX26_00647 at 690.899 kb on + strand, within MPMX26_00647 at 690.962 kb on - strand at 691.002 kb on - strand at 691.067 kb on - strand at 691.067 kb on - strand at 691.133 kb on - strand, within MPMX26_00648 at 691.241 kb on - strand, within MPMX26_00648 at 691.241 kb on - strand, within MPMX26_00648 at 691.296 kb on - strand, within MPMX26_00648 at 691.296 kb on - strand, within MPMX26_00648 at 691.296 kb on - strand, within MPMX26_00648 at 691.298 kb on - strand, within MPMX26_00648 at 691.298 kb on - strand, within MPMX26_00648 at 691.298 kb on - strand, within MPMX26_00648 at 691.383 kb on - strand, within MPMX26_00648 at 691.407 kb on - strand, within MPMX26_00648 at 691.413 kb on - strand, within MPMX26_00648 at 691.413 kb on - strand, within MPMX26_00648 at 691.413 kb on - strand, within MPMX26_00648 at 691.451 kb on - strand, within MPMX26_00648 at 691.451 kb on - strand, within MPMX26_00648 at 691.482 kb on - strand, within MPMX26_00648 at 691.515 kb on - strand, within MPMX26_00648 at 691.520 kb on - strand, within MPMX26_00648 at 691.520 kb on - strand, within MPMX26_00648 at 691.551 kb on - strand, within MPMX26_00648 at 691.551 kb on - strand, within MPMX26_00648 at 691.551 kb on - strand, within MPMX26_00648 at 691.551 kb on - strand, within MPMX26_00648 at 691.617 kb on - strand, within MPMX26_00648 at 691.619 kb on - strand, within MPMX26_00648 at 691.641 kb on - strand, within MPMX26_00648 at 691.656 kb on - strand, within MPMX26_00648 at 691.656 kb on - strand, within MPMX26_00648 at 691.656 kb on - strand, within MPMX26_00648 at 691.709 kb on - strand, within MPMX26_00648 at 691.709 kb on - strand, within MPMX26_00648 at 691.740 kb on - strand, within MPMX26_00648 at 691.740 kb on - strand, within MPMX26_00648 at 691.740 kb on - strand, within MPMX26_00648 at 691.742 kb on - strand, within MPMX26_00648 at 691.742 kb on - strand, within MPMX26_00648 at 691.773 kb on - strand, within MPMX26_00648 at 691.773 kb on - strand, within MPMX26_00648 at 691.773 kb on - strand, within MPMX26_00648 at 691.830 kb on - strand, within MPMX26_00648 at 691.853 kb on - strand, within MPMX26_00648 at 691.857 kb on - strand, within MPMX26_00648 at 691.868 kb on - strand, within MPMX26_00648 at 691.880 kb on - strand, within MPMX26_00648 at 691.985 kb on - strand, within MPMX26_00648 at 692.004 kb on - strand, within MPMX26_00648 at 692.013 kb on - strand, within MPMX26_00648 at 692.040 kb on - strand, within MPMX26_00648 at 692.066 kb on - strand, within MPMX26_00648 at 692.066 kb on - strand, within MPMX26_00648 at 692.148 kb on - strand, within MPMX26_00648 at 692.148 kb on - strand, within MPMX26_00648 at 692.180 kb on - strand, within MPMX26_00648 at 692.286 kb on - strand at 692.608 kb on - strand at 692.608 kb on - strand at 692.730 kb on - strand, within MPMX26_00649 at 692.731 kb on - strand, within MPMX26_00649 at 692.764 kb on - strand, within MPMX26_00649 at 692.764 kb on - strand, within MPMX26_00649 at 692.781 kb on - strand, within MPMX26_00649 at 692.893 kb on - strand, within MPMX26_00649 at 692.961 kb on - strand, within MPMX26_00649 at 692.988 kb on - strand, within MPMX26_00649
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 689,974 + MPMX26_00646 0.56 -1.1 689,974 + MPMX26_00646 0.56 -1.0 690,027 + MPMX26_00646 0.60 -0.2 690,027 + MPMX26_00646 0.60 -0.8 690,034 + MPMX26_00646 0.60 -1.3 690,054 + MPMX26_00646 0.62 -0.9 690,062 + MPMX26_00646 0.62 -0.1 690,062 + MPMX26_00646 0.62 -0.6 690,062 + MPMX26_00646 0.62 -1.7 690,062 + MPMX26_00646 0.62 -1.1 690,062 + MPMX26_00646 0.62 +0.9 690,062 + MPMX26_00646 0.62 -0.8 690,085 + MPMX26_00646 0.64 -1.3 690,337 + MPMX26_00646 0.81 -0.0 690,378 + MPMX26_00646 0.84 -0.5 690,476 + +0.3 690,484 + -0.3 690,484 + +1.3 690,484 + +0.1 690,484 + -1.4 690,484 + +1.3 690,484 + -2.2 690,484 + -1.9 690,495 + -0.7 690,498 + +0.9 690,576 + -0.2 690,576 + -0.9 690,688 + -1.6 690,698 + -1.8 690,718 + +0.2 690,718 + +0.8 690,851 + MPMX26_00647 0.60 -1.4 690,856 + MPMX26_00647 0.63 -2.3 690,876 + MPMX26_00647 0.74 -1.6 690,899 + MPMX26_00647 0.87 -0.6 690,899 + MPMX26_00647 0.87 -0.1 690,962 - +0.1 691,002 - -0.5 691,067 - -0.5 691,067 - -0.2 691,133 - MPMX26_00648 0.13 +0.6 691,241 - MPMX26_00648 0.20 -1.9 691,241 - MPMX26_00648 0.20 +0.1 691,296 - MPMX26_00648 0.24 +1.2 691,296 - MPMX26_00648 0.24 -1.9 691,296 - MPMX26_00648 0.24 +0.0 691,298 - MPMX26_00648 0.25 -0.3 691,298 - MPMX26_00648 0.25 +0.5 691,298 - MPMX26_00648 0.25 -1.3 691,383 - MPMX26_00648 0.31 -1.3 691,407 - MPMX26_00648 0.32 -0.3 691,413 - MPMX26_00648 0.33 +2.3 691,413 - MPMX26_00648 0.33 -0.5 691,413 - MPMX26_00648 0.33 -0.8 691,451 - MPMX26_00648 0.36 +2.9 691,451 - MPMX26_00648 0.36 -1.2 691,482 - MPMX26_00648 0.38 -0.3 691,515 - MPMX26_00648 0.40 +0.4 691,520 - MPMX26_00648 0.41 -0.2 691,520 - MPMX26_00648 0.41 +0.1 691,551 - MPMX26_00648 0.43 -1.3 691,551 - MPMX26_00648 0.43 -1.9 691,551 - MPMX26_00648 0.43 +0.5 691,551 - MPMX26_00648 0.43 -0.7 691,617 - MPMX26_00648 0.48 -0.4 691,619 - MPMX26_00648 0.48 +2.3 691,641 - MPMX26_00648 0.49 -0.7 691,656 - MPMX26_00648 0.50 -1.5 691,656 - MPMX26_00648 0.50 +2.2 691,656 - MPMX26_00648 0.50 +0.1 691,709 - MPMX26_00648 0.54 -1.3 691,709 - MPMX26_00648 0.54 +0.1 691,740 - MPMX26_00648 0.56 -0.5 691,740 - MPMX26_00648 0.56 -0.3 691,740 - MPMX26_00648 0.56 -0.3 691,742 - MPMX26_00648 0.57 -1.7 691,742 - MPMX26_00648 0.57 -0.5 691,773 - MPMX26_00648 0.59 -0.1 691,773 - MPMX26_00648 0.59 +0.6 691,773 - MPMX26_00648 0.59 -1.9 691,830 - MPMX26_00648 0.63 +0.5 691,853 - MPMX26_00648 0.65 +0.6 691,857 - MPMX26_00648 0.65 -0.5 691,868 - MPMX26_00648 0.66 -0.6 691,880 - MPMX26_00648 0.67 -0.0 691,985 - MPMX26_00648 0.74 -0.5 692,004 - MPMX26_00648 0.76 +0.1 692,013 - MPMX26_00648 0.76 +1.1 692,040 - MPMX26_00648 0.78 +0.5 692,066 - MPMX26_00648 0.80 -0.3 692,066 - MPMX26_00648 0.80 +1.5 692,148 - MPMX26_00648 0.86 +1.1 692,148 - MPMX26_00648 0.86 -0.7 692,180 - MPMX26_00648 0.88 -0.2 692,286 - +0.5 692,608 - -0.9 692,608 - -0.8 692,730 - MPMX26_00649 0.26 -0.7 692,731 - MPMX26_00649 0.26 -1.0 692,764 - MPMX26_00649 0.30 -0.1 692,764 - MPMX26_00649 0.30 +0.9 692,781 - MPMX26_00649 0.33 -2.4 692,893 - MPMX26_00649 0.48 -0.5 692,961 - MPMX26_00649 0.57 -0.3 692,988 - MPMX26_00649 0.61 +0.1
Or see this region's nucleotide sequence