Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00458

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00457 and MPMX26_00458 are separated by 206 nucleotidesMPMX26_00458 and MPMX26_00459 are separated by 130 nucleotides MPMX26_00457: MPMX26_00457 - Aspartate--tRNA(Asp/Asn) ligase, at 489,539 to 491,317 _00457 MPMX26_00458: MPMX26_00458 - hypothetical protein, at 491,524 to 492,288 _00458 MPMX26_00459: MPMX26_00459 - putative TonB-dependent receptor, at 492,419 to 494,518 _00459 Position (kb) 491 492 493Strain fitness (log2 ratio) -2 -1 0 1 2 3at 491.430 kb on - strandat 491.492 kb on - strandat 491.492 kb on - strandat 491.596 kb on - strandat 491.615 kb on - strand, within MPMX26_00458at 491.645 kb on - strand, within MPMX26_00458at 491.645 kb on - strand, within MPMX26_00458at 491.655 kb on - strand, within MPMX26_00458at 491.655 kb on - strand, within MPMX26_00458at 491.655 kb on - strand, within MPMX26_00458at 491.655 kb on - strand, within MPMX26_00458at 491.677 kb on + strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.685 kb on - strand, within MPMX26_00458at 491.762 kb on - strand, within MPMX26_00458at 491.836 kb on - strand, within MPMX26_00458at 491.854 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.863 kb on - strand, within MPMX26_00458at 491.884 kb on - strand, within MPMX26_00458at 491.920 kb on - strand, within MPMX26_00458at 491.920 kb on - strand, within MPMX26_00458at 491.936 kb on - strand, within MPMX26_00458at 491.936 kb on - strand, within MPMX26_00458at 491.936 kb on - strand, within MPMX26_00458at 491.936 kb on - strand, within MPMX26_00458at 491.937 kb on - strand, within MPMX26_00458at 491.954 kb on - strand, within MPMX26_00458at 491.958 kb on - strand, within MPMX26_00458at 491.965 kb on - strand, within MPMX26_00458at 492.012 kb on - strand, within MPMX26_00458at 492.022 kb on - strand, within MPMX26_00458at 492.063 kb on - strand, within MPMX26_00458at 492.063 kb on - strand, within MPMX26_00458at 492.063 kb on - strand, within MPMX26_00458at 492.063 kb on - strand, within MPMX26_00458at 492.088 kb on - strand, within MPMX26_00458at 492.124 kb on - strand, within MPMX26_00458at 492.134 kb on - strand, within MPMX26_00458at 492.147 kb on - strand, within MPMX26_00458at 492.149 kb on - strand, within MPMX26_00458at 492.149 kb on - strand, within MPMX26_00458at 492.153 kb on - strand, within MPMX26_00458at 492.153 kb on - strand, within MPMX26_00458at 492.153 kb on - strand, within MPMX26_00458at 492.154 kb on - strand, within MPMX26_00458at 492.154 kb on - strand, within MPMX26_00458at 492.154 kb on - strand, within MPMX26_00458at 492.186 kb on - strand, within MPMX26_00458at 492.186 kb on - strand, within MPMX26_00458at 492.192 kb on - strand, within MPMX26_00458at 492.196 kb on - strand, within MPMX26_00458at 492.207 kb on - strand, within MPMX26_00458at 492.213 kb on - strandat 492.213 kb on - strandat 492.241 kb on - strandat 492.264 kb on - strandat 492.264 kb on - strandat 492.274 kb on - strandat 492.274 kb on - strandat 492.490 kb on + strandat 492.490 kb on + strandat 492.500 kb on + strandat 492.500 kb on + strandat 492.500 kb on + strandat 492.500 kb on + strandat 492.500 kb on + strandat 492.500 kb on + strandat 492.508 kb on + strandat 492.513 kb on + strandat 492.523 kb on + strandat 492.523 kb on + strandat 492.554 kb on + strandat 492.595 kb on + strandat 492.598 kb on + strandat 492.626 kb on + strandat 492.635 kb on + strand, within MPMX26_00459at 492.640 kb on + strand, within MPMX26_00459at 492.640 kb on + strand, within MPMX26_00459at 492.645 kb on + strand, within MPMX26_00459at 492.646 kb on + strand, within MPMX26_00459at 492.651 kb on + strand, within MPMX26_00459at 492.651 kb on + strand, within MPMX26_00459at 492.661 kb on + strand, within MPMX26_00459at 492.661 kb on + strand, within MPMX26_00459at 492.661 kb on + strand, within MPMX26_00459at 492.661 kb on + strand, within MPMX26_00459at 492.672 kb on + strand, within MPMX26_00459at 492.672 kb on + strand, within MPMX26_00459at 492.705 kb on + strand, within MPMX26_00459at 492.710 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.712 kb on + strand, within MPMX26_00459at 492.722 kb on + strand, within MPMX26_00459at 492.737 kb on + strand, within MPMX26_00459at 492.741 kb on + strand, within MPMX26_00459at 492.748 kb on + strand, within MPMX26_00459at 492.749 kb on + strand, within MPMX26_00459at 492.749 kb on + strand, within MPMX26_00459at 492.757 kb on + strand, within MPMX26_00459at 492.757 kb on + strand, within MPMX26_00459at 492.762 kb on + strand, within MPMX26_00459at 492.768 kb on + strand, within MPMX26_00459at 492.776 kb on + strand, within MPMX26_00459at 492.786 kb on + strand, within MPMX26_00459at 492.786 kb on + strand, within MPMX26_00459at 492.786 kb on + strand, within MPMX26_00459at 492.801 kb on + strand, within MPMX26_00459at 492.805 kb on + strand, within MPMX26_00459at 492.822 kb on + strand, within MPMX26_00459at 492.824 kb on + strand, within MPMX26_00459at 492.838 kb on + strand, within MPMX26_00459at 492.838 kb on + strand, within MPMX26_00459at 492.844 kb on + strand, within MPMX26_00459at 492.865 kb on + strand, within MPMX26_00459at 492.865 kb on + strand, within MPMX26_00459at 492.865 kb on + strand, within MPMX26_00459at 492.896 kb on + strand, within MPMX26_00459at 492.905 kb on + strand, within MPMX26_00459at 492.914 kb on + strand, within MPMX26_00459at 492.929 kb on + strand, within MPMX26_00459at 492.929 kb on + strand, within MPMX26_00459at 492.929 kb on + strand, within MPMX26_00459at 492.934 kb on + strand, within MPMX26_00459at 492.961 kb on + strand, within MPMX26_00459at 492.961 kb on + strand, within MPMX26_00459at 492.961 kb on + strand, within MPMX26_00459at 492.961 kb on + strand, within MPMX26_00459at 493.039 kb on + strand, within MPMX26_00459at 493.039 kb on + strand, within MPMX26_00459at 493.057 kb on + strand, within MPMX26_00459at 493.059 kb on + strand, within MPMX26_00459at 493.059 kb on + strand, within MPMX26_00459at 493.082 kb on + strand, within MPMX26_00459at 493.110 kb on + strand, within MPMX26_00459at 493.110 kb on + strand, within MPMX26_00459at 493.132 kb on + strand, within MPMX26_00459at 493.156 kb on + strand, within MPMX26_00459at 493.184 kb on + strand, within MPMX26_00459at 493.189 kb on + strand, within MPMX26_00459at 493.203 kb on + strand, within MPMX26_00459at 493.208 kb on + strand, within MPMX26_00459at 493.216 kb on + strand, within MPMX26_00459at 493.226 kb on + strand, within MPMX26_00459at 493.226 kb on + strand, within MPMX26_00459at 493.267 kb on + strand, within MPMX26_00459at 493.277 kb on + strand, within MPMX26_00459at 493.277 kb on + strand, within MPMX26_00459at 493.279 kb on + strand, within MPMX26_00459at 493.282 kb on + strand, within MPMX26_00459

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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491,430 - +0.5
491,492 - -1.5
491,492 - +2.5
491,596 - -0.3
491,615 - MPMX26_00458 0.12 +0.9
491,645 - MPMX26_00458 0.16 -1.0
491,645 - MPMX26_00458 0.16 +0.5
491,655 - MPMX26_00458 0.17 +0.0
491,655 - MPMX26_00458 0.17 -1.4
491,655 - MPMX26_00458 0.17 -0.8
491,655 - MPMX26_00458 0.17 -0.2
491,677 + MPMX26_00458 0.20 +0.2
491,685 - MPMX26_00458 0.21 -1.5
491,685 - MPMX26_00458 0.21 -0.0
491,685 - MPMX26_00458 0.21 +1.6
491,685 - MPMX26_00458 0.21 +1.2
491,685 - MPMX26_00458 0.21 +0.0
491,685 - MPMX26_00458 0.21 -1.0
491,685 - MPMX26_00458 0.21 -1.3
491,685 - MPMX26_00458 0.21 +0.3
491,685 - MPMX26_00458 0.21 +0.9
491,685 - MPMX26_00458 0.21 +1.7
491,685 - MPMX26_00458 0.21 +0.5
491,685 - MPMX26_00458 0.21 -2.0
491,762 - MPMX26_00458 0.31 +1.7
491,836 - MPMX26_00458 0.41 -0.6
491,854 - MPMX26_00458 0.43 -0.2
491,863 - MPMX26_00458 0.44 -0.8
491,863 - MPMX26_00458 0.44 +0.5
491,863 - MPMX26_00458 0.44 -0.1
491,863 - MPMX26_00458 0.44 +0.5
491,863 - MPMX26_00458 0.44 -0.2
491,863 - MPMX26_00458 0.44 +0.3
491,863 - MPMX26_00458 0.44 -0.6
491,863 - MPMX26_00458 0.44 -0.7
491,884 - MPMX26_00458 0.47 -0.6
491,920 - MPMX26_00458 0.52 -0.2
491,920 - MPMX26_00458 0.52 -1.6
491,936 - MPMX26_00458 0.54 -0.0
491,936 - MPMX26_00458 0.54 +1.9
491,936 - MPMX26_00458 0.54 +2.1
491,936 - MPMX26_00458 0.54 +0.3
491,937 - MPMX26_00458 0.54 +0.5
491,954 - MPMX26_00458 0.56 -0.7
491,958 - MPMX26_00458 0.57 -2.0
491,965 - MPMX26_00458 0.58 -0.3
492,012 - MPMX26_00458 0.64 -1.1
492,022 - MPMX26_00458 0.65 +0.0
492,063 - MPMX26_00458 0.70 -1.2
492,063 - MPMX26_00458 0.70 +1.5
492,063 - MPMX26_00458 0.70 +0.3
492,063 - MPMX26_00458 0.70 +0.1
492,088 - MPMX26_00458 0.74 -0.7
492,124 - MPMX26_00458 0.78 +0.2
492,134 - MPMX26_00458 0.80 +0.6
492,147 - MPMX26_00458 0.81 -0.2
492,149 - MPMX26_00458 0.82 +1.3
492,149 - MPMX26_00458 0.82 -0.2
492,153 - MPMX26_00458 0.82 +0.2
492,153 - MPMX26_00458 0.82 +0.3
492,153 - MPMX26_00458 0.82 -2.2
492,154 - MPMX26_00458 0.82 -0.6
492,154 - MPMX26_00458 0.82 +0.1
492,154 - MPMX26_00458 0.82 +0.6
492,186 - MPMX26_00458 0.87 -0.2
492,186 - MPMX26_00458 0.87 -1.0
492,192 - MPMX26_00458 0.87 -0.9
492,196 - MPMX26_00458 0.88 +0.9
492,207 - MPMX26_00458 0.89 -0.9
492,213 - +0.0
492,213 - -0.2
492,241 - -0.3
492,264 - -0.5
492,264 - +0.6
492,274 - -0.5
492,274 - -0.1
492,490 + -0.1
492,490 + -0.7
492,500 + +0.9
492,500 + +0.5
492,500 + -0.8
492,500 + +0.5
492,500 + +0.0
492,500 + -1.1
492,508 + +0.6
492,513 + +0.2
492,523 + -0.6
492,523 + +0.3
492,554 + -0.8
492,595 + +0.3
492,598 + +0.9
492,626 + -0.2
492,635 + MPMX26_00459 0.10 -0.2
492,640 + MPMX26_00459 0.11 +0.0
492,640 + MPMX26_00459 0.11 +0.3
492,645 + MPMX26_00459 0.11 +1.0
492,646 + MPMX26_00459 0.11 +0.2
492,651 + MPMX26_00459 0.11 +0.6
492,651 + MPMX26_00459 0.11 +0.6
492,661 + MPMX26_00459 0.12 -0.7
492,661 + MPMX26_00459 0.12 -0.1
492,661 + MPMX26_00459 0.12 -0.5
492,661 + MPMX26_00459 0.12 -0.6
492,672 + MPMX26_00459 0.12 -0.7
492,672 + MPMX26_00459 0.12 -0.1
492,705 + MPMX26_00459 0.14 +0.1
492,710 + MPMX26_00459 0.14 -0.1
492,712 + MPMX26_00459 0.14 +0.2
492,712 + MPMX26_00459 0.14 -1.3
492,712 + MPMX26_00459 0.14 -0.2
492,712 + MPMX26_00459 0.14 -0.5
492,712 + MPMX26_00459 0.14 +0.1
492,712 + MPMX26_00459 0.14 -0.5
492,722 + MPMX26_00459 0.14 +0.2
492,737 + MPMX26_00459 0.15 -0.1
492,741 + MPMX26_00459 0.15 -0.8
492,748 + MPMX26_00459 0.16 -0.2
492,749 + MPMX26_00459 0.16 -0.3
492,749 + MPMX26_00459 0.16 +0.6
492,757 + MPMX26_00459 0.16 -0.7
492,757 + MPMX26_00459 0.16 -0.8
492,762 + MPMX26_00459 0.16 -0.2
492,768 + MPMX26_00459 0.17 +0.5
492,776 + MPMX26_00459 0.17 -1.2
492,786 + MPMX26_00459 0.17 -0.4
492,786 + MPMX26_00459 0.17 +0.6
492,786 + MPMX26_00459 0.17 +0.1
492,801 + MPMX26_00459 0.18 +0.3
492,805 + MPMX26_00459 0.18 +0.4
492,822 + MPMX26_00459 0.19 -0.2
492,824 + MPMX26_00459 0.19 +0.4
492,838 + MPMX26_00459 0.20 +0.0
492,838 + MPMX26_00459 0.20 +0.1
492,844 + MPMX26_00459 0.20 +0.7
492,865 + MPMX26_00459 0.21 +0.7
492,865 + MPMX26_00459 0.21 -0.7
492,865 + MPMX26_00459 0.21 -0.8
492,896 + MPMX26_00459 0.23 -1.2
492,905 + MPMX26_00459 0.23 -0.6
492,914 + MPMX26_00459 0.24 +0.6
492,929 + MPMX26_00459 0.24 +0.1
492,929 + MPMX26_00459 0.24 +0.0
492,929 + MPMX26_00459 0.24 +0.4
492,934 + MPMX26_00459 0.25 +0.5
492,961 + MPMX26_00459 0.26 -1.3
492,961 + MPMX26_00459 0.26 +1.0
492,961 + MPMX26_00459 0.26 -0.5
492,961 + MPMX26_00459 0.26 +0.5
493,039 + MPMX26_00459 0.30 -0.2
493,039 + MPMX26_00459 0.30 +0.1
493,057 + MPMX26_00459 0.30 +0.9
493,059 + MPMX26_00459 0.30 +0.6
493,059 + MPMX26_00459 0.30 +0.6
493,082 + MPMX26_00459 0.32 -0.9
493,110 + MPMX26_00459 0.33 +0.9
493,110 + MPMX26_00459 0.33 +0.3
493,132 + MPMX26_00459 0.34 -0.7
493,156 + MPMX26_00459 0.35 -0.9
493,184 + MPMX26_00459 0.36 -0.2
493,189 + MPMX26_00459 0.37 -0.8
493,203 + MPMX26_00459 0.37 +2.9
493,208 + MPMX26_00459 0.38 -0.2
493,216 + MPMX26_00459 0.38 -0.0
493,226 + MPMX26_00459 0.38 -0.4
493,226 + MPMX26_00459 0.38 -1.5
493,267 + MPMX26_00459 0.40 +1.1
493,277 + MPMX26_00459 0.41 -0.1
493,277 + MPMX26_00459 0.41 -0.1
493,279 + MPMX26_00459 0.41 +0.8
493,282 + MPMX26_00459 0.41 +0.0

Or see this region's nucleotide sequence