Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00420

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00418 and MPMX26_00419 are separated by 23 nucleotidesMPMX26_00419 and MPMX26_00420 are separated by 84 nucleotidesMPMX26_00420 and MPMX26_00421 are separated by 194 nucleotides MPMX26_00418: MPMX26_00418 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 448,798 to 450,117 _00418 MPMX26_00419: MPMX26_00419 - hypothetical protein, at 450,141 to 450,995 _00419 MPMX26_00420: MPMX26_00420 - Beta-hexosaminidase, at 451,080 to 452,105 _00420 MPMX26_00421: MPMX26_00421 - Tail-specific protease, at 452,300 to 454,489 _00421 Position (kb) 451 452 453Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 450.195 kb on + strandat 450.250 kb on + strand, within MPMX26_00419at 450.253 kb on - strand, within MPMX26_00419at 450.257 kb on - strand, within MPMX26_00419at 450.258 kb on - strand, within MPMX26_00419at 450.258 kb on - strand, within MPMX26_00419at 450.258 kb on - strand, within MPMX26_00419at 450.258 kb on - strand, within MPMX26_00419at 450.258 kb on - strand, within MPMX26_00419at 450.276 kb on - strand, within MPMX26_00419at 450.336 kb on - strand, within MPMX26_00419at 450.623 kb on - strand, within MPMX26_00419at 450.857 kb on - strand, within MPMX26_00419at 450.983 kb on + strandat 451.061 kb on - strandat 451.063 kb on - strandat 451.143 kb on - strandat 451.151 kb on - strandat 451.153 kb on - strandat 451.232 kb on - strand, within MPMX26_00420at 451.232 kb on - strand, within MPMX26_00420at 451.232 kb on - strand, within MPMX26_00420at 451.249 kb on - strand, within MPMX26_00420at 451.249 kb on - strand, within MPMX26_00420at 451.249 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.263 kb on - strand, within MPMX26_00420at 451.275 kb on - strand, within MPMX26_00420at 451.275 kb on - strand, within MPMX26_00420at 451.327 kb on - strand, within MPMX26_00420at 451.327 kb on - strand, within MPMX26_00420at 451.352 kb on - strand, within MPMX26_00420at 451.366 kb on - strand, within MPMX26_00420at 451.415 kb on - strand, within MPMX26_00420at 451.452 kb on - strand, within MPMX26_00420at 451.452 kb on - strand, within MPMX26_00420at 451.452 kb on - strand, within MPMX26_00420at 451.479 kb on - strand, within MPMX26_00420at 451.497 kb on - strand, within MPMX26_00420at 451.497 kb on - strand, within MPMX26_00420at 451.497 kb on - strand, within MPMX26_00420at 451.519 kb on + strand, within MPMX26_00420at 451.590 kb on - strand, within MPMX26_00420at 451.596 kb on - strand, within MPMX26_00420at 451.596 kb on - strand, within MPMX26_00420at 451.596 kb on - strand, within MPMX26_00420at 451.599 kb on - strand, within MPMX26_00420at 451.601 kb on - strand, within MPMX26_00420at 451.611 kb on - strand, within MPMX26_00420at 451.616 kb on - strand, within MPMX26_00420at 451.626 kb on - strand, within MPMX26_00420at 451.626 kb on - strand, within MPMX26_00420at 451.626 kb on - strand, within MPMX26_00420at 451.626 kb on - strand, within MPMX26_00420at 451.638 kb on + strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.646 kb on - strand, within MPMX26_00420at 451.657 kb on - strand, within MPMX26_00420at 451.678 kb on - strand, within MPMX26_00420at 451.689 kb on - strand, within MPMX26_00420at 451.689 kb on - strand, within MPMX26_00420at 451.739 kb on - strand, within MPMX26_00420at 451.795 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.823 kb on - strand, within MPMX26_00420at 451.868 kb on - strand, within MPMX26_00420at 451.885 kb on - strand, within MPMX26_00420at 451.906 kb on - strand, within MPMX26_00420at 451.909 kb on - strand, within MPMX26_00420at 451.964 kb on - strand, within MPMX26_00420at 451.980 kb on - strand, within MPMX26_00420at 451.980 kb on - strand, within MPMX26_00420at 451.980 kb on - strand, within MPMX26_00420at 451.985 kb on - strand, within MPMX26_00420at 451.985 kb on - strand, within MPMX26_00420at 451.988 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.990 kb on - strand, within MPMX26_00420at 451.999 kb on - strand, within MPMX26_00420at 452.033 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.043 kb on - strandat 452.053 kb on - strandat 452.054 kb on + strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.069 kb on - strandat 452.074 kb on - strandat 452.074 kb on - strandat 452.074 kb on - strandat 452.074 kb on - strandat 452.074 kb on - strandat 452.085 kb on - strandat 452.169 kb on - strandat 452.200 kb on + strandat 452.219 kb on + strandat 452.219 kb on + strandat 452.219 kb on + strandat 452.219 kb on + strandat 452.219 kb on + strandat 452.231 kb on + strandat 452.263 kb on + strandat 452.317 kb on + strandat 452.319 kb on + strandat 452.319 kb on + strandat 452.319 kb on + strandat 452.373 kb on + strandat 452.406 kb on + strandat 452.463 kb on + strandat 452.463 kb on + strandat 452.534 kb on + strand, within MPMX26_00421at 452.534 kb on + strand, within MPMX26_00421at 452.534 kb on + strand, within MPMX26_00421at 452.539 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.544 kb on + strand, within MPMX26_00421at 452.549 kb on + strand, within MPMX26_00421at 452.549 kb on + strand, within MPMX26_00421at 452.549 kb on + strand, within MPMX26_00421at 452.549 kb on + strand, within MPMX26_00421at 452.575 kb on + strand, within MPMX26_00421at 452.624 kb on + strand, within MPMX26_00421at 452.624 kb on + strand, within MPMX26_00421at 452.639 kb on + strand, within MPMX26_00421at 452.644 kb on + strand, within MPMX26_00421at 452.644 kb on + strand, within MPMX26_00421at 452.644 kb on + strand, within MPMX26_00421at 452.655 kb on + strand, within MPMX26_00421at 452.666 kb on + strand, within MPMX26_00421at 452.680 kb on + strand, within MPMX26_00421at 452.716 kb on + strand, within MPMX26_00421at 452.770 kb on + strand, within MPMX26_00421at 452.796 kb on + strand, within MPMX26_00421at 452.842 kb on + strand, within MPMX26_00421at 452.842 kb on + strand, within MPMX26_00421at 452.842 kb on + strand, within MPMX26_00421at 452.851 kb on + strand, within MPMX26_00421at 452.901 kb on + strand, within MPMX26_00421at 452.934 kb on + strand, within MPMX26_00421at 452.944 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.954 kb on + strand, within MPMX26_00421at 452.972 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.004 kb on + strand, within MPMX26_00421at 453.025 kb on + strand, within MPMX26_00421at 453.025 kb on + strand, within MPMX26_00421at 453.025 kb on + strand, within MPMX26_00421at 453.025 kb on + strand, within MPMX26_00421at 453.025 kb on + strand, within MPMX26_00421at 453.046 kb on + strand, within MPMX26_00421at 453.054 kb on + strand, within MPMX26_00421at 453.054 kb on + strand, within MPMX26_00421at 453.054 kb on + strand, within MPMX26_00421at 453.098 kb on + strand, within MPMX26_00421

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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450,195 + +1.7
450,250 + MPMX26_00419 0.13 -0.4
450,253 - MPMX26_00419 0.13 +2.9
450,257 - MPMX26_00419 0.14 +0.2
450,258 - MPMX26_00419 0.14 +0.3
450,258 - MPMX26_00419 0.14 +1.3
450,258 - MPMX26_00419 0.14 -0.3
450,258 - MPMX26_00419 0.14 +1.6
450,258 - MPMX26_00419 0.14 +0.5
450,276 - MPMX26_00419 0.16 -0.1
450,336 - MPMX26_00419 0.23 +0.8
450,623 - MPMX26_00419 0.56 +1.3
450,857 - MPMX26_00419 0.84 -1.3
450,983 + +1.8
451,061 - +1.1
451,063 - -0.3
451,143 - +0.1
451,151 - +0.3
451,153 - -0.6
451,232 - MPMX26_00420 0.15 +0.5
451,232 - MPMX26_00420 0.15 -1.9
451,232 - MPMX26_00420 0.15 -0.6
451,249 - MPMX26_00420 0.16 +0.5
451,249 - MPMX26_00420 0.16 -0.3
451,249 - MPMX26_00420 0.16 +0.8
451,263 - MPMX26_00420 0.18 -0.9
451,263 - MPMX26_00420 0.18 -0.2
451,263 - MPMX26_00420 0.18 +0.5
451,263 - MPMX26_00420 0.18 -0.6
451,263 - MPMX26_00420 0.18 -1.2
451,263 - MPMX26_00420 0.18 +0.8
451,263 - MPMX26_00420 0.18 -0.4
451,275 - MPMX26_00420 0.19 +0.2
451,275 - MPMX26_00420 0.19 -0.3
451,327 - MPMX26_00420 0.24 -0.4
451,327 - MPMX26_00420 0.24 +0.8
451,352 - MPMX26_00420 0.27 +0.3
451,366 - MPMX26_00420 0.28 +0.3
451,415 - MPMX26_00420 0.33 -0.4
451,452 - MPMX26_00420 0.36 -0.0
451,452 - MPMX26_00420 0.36 -0.0
451,452 - MPMX26_00420 0.36 +0.5
451,479 - MPMX26_00420 0.39 +1.6
451,497 - MPMX26_00420 0.41 -0.0
451,497 - MPMX26_00420 0.41 +1.0
451,497 - MPMX26_00420 0.41 +0.3
451,519 + MPMX26_00420 0.43 +0.6
451,590 - MPMX26_00420 0.50 -0.3
451,596 - MPMX26_00420 0.50 +0.5
451,596 - MPMX26_00420 0.50 -0.6
451,596 - MPMX26_00420 0.50 -0.4
451,599 - MPMX26_00420 0.51 -0.1
451,601 - MPMX26_00420 0.51 -0.8
451,611 - MPMX26_00420 0.52 -0.1
451,616 - MPMX26_00420 0.52 +0.5
451,626 - MPMX26_00420 0.53 -0.0
451,626 - MPMX26_00420 0.53 -0.1
451,626 - MPMX26_00420 0.53 +1.0
451,626 - MPMX26_00420 0.53 -0.3
451,638 + MPMX26_00420 0.54 +2.9
451,646 - MPMX26_00420 0.55 -0.2
451,646 - MPMX26_00420 0.55 +0.1
451,646 - MPMX26_00420 0.55 +0.6
451,646 - MPMX26_00420 0.55 -0.7
451,646 - MPMX26_00420 0.55 +0.2
451,646 - MPMX26_00420 0.55 -0.2
451,646 - MPMX26_00420 0.55 +0.4
451,646 - MPMX26_00420 0.55 +0.6
451,646 - MPMX26_00420 0.55 +0.2
451,646 - MPMX26_00420 0.55 +0.1
451,646 - MPMX26_00420 0.55 -0.3
451,657 - MPMX26_00420 0.56 -0.8
451,678 - MPMX26_00420 0.58 +0.8
451,689 - MPMX26_00420 0.59 -1.5
451,689 - MPMX26_00420 0.59 +1.0
451,739 - MPMX26_00420 0.64 -0.2
451,795 - MPMX26_00420 0.70 +0.5
451,823 - MPMX26_00420 0.72 +2.3
451,823 - MPMX26_00420 0.72 -0.4
451,823 - MPMX26_00420 0.72 -0.9
451,823 - MPMX26_00420 0.72 +0.5
451,823 - MPMX26_00420 0.72 +1.3
451,823 - MPMX26_00420 0.72 +1.0
451,823 - MPMX26_00420 0.72 -0.4
451,823 - MPMX26_00420 0.72 +0.1
451,823 - MPMX26_00420 0.72 -0.4
451,823 - MPMX26_00420 0.72 +0.1
451,823 - MPMX26_00420 0.72 +0.3
451,823 - MPMX26_00420 0.72 -0.1
451,823 - MPMX26_00420 0.72 -1.1
451,823 - MPMX26_00420 0.72 -0.1
451,868 - MPMX26_00420 0.77 -0.1
451,885 - MPMX26_00420 0.78 +1.9
451,906 - MPMX26_00420 0.81 -1.0
451,909 - MPMX26_00420 0.81 +1.1
451,964 - MPMX26_00420 0.86 -0.4
451,980 - MPMX26_00420 0.88 +1.2
451,980 - MPMX26_00420 0.88 +0.1
451,980 - MPMX26_00420 0.88 +0.0
451,985 - MPMX26_00420 0.88 +1.3
451,985 - MPMX26_00420 0.88 +1.7
451,988 - MPMX26_00420 0.88 +0.1
451,990 - MPMX26_00420 0.89 +0.2
451,990 - MPMX26_00420 0.89 -0.6
451,990 - MPMX26_00420 0.89 +0.2
451,990 - MPMX26_00420 0.89 +0.5
451,990 - MPMX26_00420 0.89 -0.0
451,990 - MPMX26_00420 0.89 -0.2
451,990 - MPMX26_00420 0.89 -1.2
451,990 - MPMX26_00420 0.89 -0.9
451,999 - MPMX26_00420 0.90 -0.9
452,033 - +0.2
452,043 - +0.2
452,043 - +1.0
452,043 - -0.2
452,043 - +0.8
452,043 - -0.2
452,043 - -0.1
452,043 - -0.2
452,043 - -0.9
452,043 - +0.1
452,043 - -1.4
452,053 - +0.5
452,054 + -0.7
452,069 - +0.2
452,069 - +0.1
452,069 - +0.2
452,069 - +0.2
452,069 - -0.0
452,069 - -0.3
452,069 - +0.3
452,069 - -0.3
452,069 - -1.1
452,069 - -0.9
452,069 - -1.3
452,069 - +0.2
452,069 - +0.0
452,069 - -0.5
452,074 - -0.5
452,074 - +1.9
452,074 - +1.8
452,074 - -1.2
452,074 - -0.1
452,085 - +0.0
452,169 - +2.3
452,200 + -0.8
452,219 + -0.2
452,219 + -0.5
452,219 + +0.2
452,219 + -0.3
452,219 + +0.3
452,231 + +0.3
452,263 + -1.5
452,317 + -0.2
452,319 + +1.9
452,319 + +1.3
452,319 + +0.1
452,373 + +1.9
452,406 + -1.6
452,463 + -1.8
452,463 + -0.9
452,534 + MPMX26_00421 0.11 +0.3
452,534 + MPMX26_00421 0.11 +0.6
452,534 + MPMX26_00421 0.11 -2.4
452,539 + MPMX26_00421 0.11 +1.9
452,544 + MPMX26_00421 0.11 +0.6
452,544 + MPMX26_00421 0.11 -0.1
452,544 + MPMX26_00421 0.11 -0.4
452,544 + MPMX26_00421 0.11 -0.8
452,544 + MPMX26_00421 0.11 -0.8
452,544 + MPMX26_00421 0.11 +2.9
452,544 + MPMX26_00421 0.11 -0.2
452,544 + MPMX26_00421 0.11 +1.9
452,544 + MPMX26_00421 0.11 +1.3
452,544 + MPMX26_00421 0.11 -0.4
452,544 + MPMX26_00421 0.11 +0.9
452,544 + MPMX26_00421 0.11 -0.7
452,544 + MPMX26_00421 0.11 +1.9
452,544 + MPMX26_00421 0.11 +1.3
452,544 + MPMX26_00421 0.11 +0.1
452,549 + MPMX26_00421 0.11 +1.3
452,549 + MPMX26_00421 0.11 -0.4
452,549 + MPMX26_00421 0.11 +0.9
452,549 + MPMX26_00421 0.11 -1.1
452,575 + MPMX26_00421 0.13 +0.3
452,624 + MPMX26_00421 0.15 +0.9
452,624 + MPMX26_00421 0.15 -0.2
452,639 + MPMX26_00421 0.15 -1.4
452,644 + MPMX26_00421 0.16 -2.3
452,644 + MPMX26_00421 0.16 +0.3
452,644 + MPMX26_00421 0.16 -1.6
452,655 + MPMX26_00421 0.16 +0.3
452,666 + MPMX26_00421 0.17 -1.7
452,680 + MPMX26_00421 0.17 -0.1
452,716 + MPMX26_00421 0.19 +0.9
452,770 + MPMX26_00421 0.21 -0.2
452,796 + MPMX26_00421 0.23 +0.6
452,842 + MPMX26_00421 0.25 -0.1
452,842 + MPMX26_00421 0.25 +1.3
452,842 + MPMX26_00421 0.25 +0.3
452,851 + MPMX26_00421 0.25 +0.9
452,901 + MPMX26_00421 0.27 +1.9
452,934 + MPMX26_00421 0.29 -1.2
452,944 + MPMX26_00421 0.29 +0.6
452,954 + MPMX26_00421 0.30 -1.2
452,954 + MPMX26_00421 0.30 -1.1
452,954 + MPMX26_00421 0.30 +0.3
452,954 + MPMX26_00421 0.30 -2.2
452,954 + MPMX26_00421 0.30 -2.4
452,954 + MPMX26_00421 0.30 -0.2
452,954 + MPMX26_00421 0.30 -0.5
452,954 + MPMX26_00421 0.30 +0.6
452,954 + MPMX26_00421 0.30 +0.3
452,954 + MPMX26_00421 0.30 -1.7
452,954 + MPMX26_00421 0.30 -1.9
452,954 + MPMX26_00421 0.30 -1.7
452,954 + MPMX26_00421 0.30 -1.0
452,954 + MPMX26_00421 0.30 -1.3
452,954 + MPMX26_00421 0.30 -1.9
452,972 + MPMX26_00421 0.31 +0.3
453,004 + MPMX26_00421 0.32 -2.7
453,004 + MPMX26_00421 0.32 -1.8
453,004 + MPMX26_00421 0.32 -0.9
453,004 + MPMX26_00421 0.32 -0.1
453,004 + MPMX26_00421 0.32 -2.8
453,004 + MPMX26_00421 0.32 -1.8
453,025 + MPMX26_00421 0.33 +0.1
453,025 + MPMX26_00421 0.33 -1.2
453,025 + MPMX26_00421 0.33 -1.5
453,025 + MPMX26_00421 0.33 -0.8
453,025 + MPMX26_00421 0.33 +0.1
453,046 + MPMX26_00421 0.34 -0.8
453,054 + MPMX26_00421 0.34 +0.9
453,054 + MPMX26_00421 0.34 -0.8
453,054 + MPMX26_00421 0.34 +0.6
453,098 + MPMX26_00421 0.36 -1.2

Or see this region's nucleotide sequence