Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00256 and MPMX26_00257 are separated by 9 nucleotides MPMX26_00257 and MPMX26_00258 overlap by 4 nucleotides MPMX26_00258 and MPMX26_00259 are separated by 3 nucleotides MPMX26_00259 and MPMX26_00260 overlap by 1 nucleotides MPMX26_00260 and MPMX26_00261 are separated by 6 nucleotides
MPMX26_00256: MPMX26_00256 - Na(+)/H(+) antiporter subunit G, at 275,740 to 276,159
_00256
MPMX26_00257: MPMX26_00257 - Na(+)/H(+) antiporter subunit F, at 276,169 to 276,441
_00257
MPMX26_00258: MPMX26_00258 - Na(+)/H(+) antiporter subunit E1, at 276,438 to 276,977
_00258
MPMX26_00259: MPMX26_00259 - Na(+)/H(+) antiporter subunit D, at 276,981 to 278,789
_00259
MPMX26_00260: MPMX26_00260 - Na(+)/H(+) antiporter subunit C1, at 278,789 to 279,157
_00260
MPMX26_00261: MPMX26_00261 - Na(+)/H(+) antiporter subunit A, at 279,164 to 281,989
_00261
Position (kb) 276
277
278
279 Strain fitness (log2 ratio) -2
-1
0
1
2 at 276.153 kb on - strand at 276.975 kb on - strand at 276.987 kb on - strand at 276.993 kb on - strand at 276.995 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.002 kb on - strand at 277.033 kb on - strand at 277.033 kb on - strand at 277.033 kb on - strand at 277.033 kb on - strand at 277.040 kb on - strand at 277.131 kb on - strand at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.192 kb on - strand, within MPMX26_00259 at 277.200 kb on - strand, within MPMX26_00259 at 277.242 kb on - strand, within MPMX26_00259 at 277.242 kb on - strand, within MPMX26_00259 at 277.272 kb on - strand, within MPMX26_00259 at 277.275 kb on - strand, within MPMX26_00259 at 277.275 kb on - strand, within MPMX26_00259 at 278.797 kb on - strand at 278.802 kb on - strand at 278.802 kb on - strand at 279.189 kb on - strand at 279.206 kb on - strand at 279.207 kb on - strand at 279.217 kb on - strand at 279.217 kb on - strand at 279.217 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 276,153 - -0.4 276,975 - -1.4 276,987 - -0.5 276,993 - -0.5 276,995 - -1.1 277,002 - +0.5 277,002 - -0.9 277,002 - -0.6 277,002 - -0.4 277,002 - +0.0 277,002 - -0.3 277,002 - -0.2 277,002 - +1.3 277,002 - -0.1 277,002 - -0.8 277,002 - +0.2 277,002 - -0.2 277,002 - +0.2 277,002 - -0.9 277,002 - -1.3 277,002 - -0.2 277,002 - -1.3 277,002 - -0.6 277,033 - +0.3 277,033 - -1.0 277,033 - -0.7 277,033 - -0.3 277,040 - +0.2 277,131 - -0.6 277,192 - MPMX26_00259 0.12 -0.2 277,192 - MPMX26_00259 0.12 -0.2 277,192 - MPMX26_00259 0.12 -0.4 277,192 - MPMX26_00259 0.12 -0.5 277,192 - MPMX26_00259 0.12 -0.4 277,192 - MPMX26_00259 0.12 -2.3 277,192 - MPMX26_00259 0.12 -1.6 277,200 - MPMX26_00259 0.12 -0.5 277,242 - MPMX26_00259 0.14 -0.5 277,242 - MPMX26_00259 0.14 -0.6 277,272 - MPMX26_00259 0.16 -1.1 277,275 - MPMX26_00259 0.16 +0.8 277,275 - MPMX26_00259 0.16 -0.9 278,797 - +0.2 278,802 - -1.4 278,802 - -1.9 279,189 - +0.2 279,206 - -0.4 279,207 - -0.5 279,217 - +1.9 279,217 - +0.5 279,217 - +0.1
Or see this region's nucleotide sequence