Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00132 and MPMX26_00133 are separated by 260 nucleotides MPMX26_00133 and MPMX26_00134 are separated by 43 nucleotides MPMX26_00134 and MPMX26_00135 are separated by 84 nucleotides MPMX26_00135 and MPMX26_00136 overlap by 4 nucleotides
MPMX26_00132: MPMX26_00132 - Putative multidrug resistance protein MdtD, at 143,037 to 144,443
_00132
MPMX26_00133: MPMX26_00133 - hypothetical protein, at 144,704 to 145,672
_00133
MPMX26_00134: MPMX26_00134 - Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase, at 145,716 to 146,339
_00134
MPMX26_00135: MPMX26_00135 - hypothetical protein, at 146,424 to 146,672
_00135
MPMX26_00136: MPMX26_00136 - hypothetical protein, at 146,669 to 148,270
_00136
Position (kb) 144
145
146 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 143.706 kb on - strand, within MPMX26_00132 at 143.785 kb on - strand, within MPMX26_00132 at 143.797 kb on - strand, within MPMX26_00132 at 143.797 kb on - strand, within MPMX26_00132 at 143.797 kb on - strand, within MPMX26_00132 at 143.797 kb on - strand, within MPMX26_00132 at 143.813 kb on - strand, within MPMX26_00132 at 143.862 kb on - strand, within MPMX26_00132 at 143.891 kb on - strand, within MPMX26_00132 at 143.915 kb on - strand, within MPMX26_00132 at 143.932 kb on - strand, within MPMX26_00132 at 143.969 kb on + strand, within MPMX26_00132 at 143.969 kb on + strand, within MPMX26_00132 at 143.977 kb on - strand, within MPMX26_00132 at 143.977 kb on - strand, within MPMX26_00132 at 143.977 kb on - strand, within MPMX26_00132 at 143.977 kb on - strand, within MPMX26_00132 at 144.017 kb on - strand, within MPMX26_00132 at 144.017 kb on - strand, within MPMX26_00132 at 144.017 kb on - strand, within MPMX26_00132 at 144.154 kb on - strand, within MPMX26_00132 at 144.154 kb on - strand, within MPMX26_00132 at 144.154 kb on - strand, within MPMX26_00132 at 144.154 kb on - strand, within MPMX26_00132 at 144.156 kb on - strand, within MPMX26_00132 at 144.204 kb on - strand, within MPMX26_00132 at 144.204 kb on - strand, within MPMX26_00132 at 144.214 kb on - strand, within MPMX26_00132 at 144.236 kb on + strand, within MPMX26_00132 at 144.246 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.258 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.263 kb on - strand, within MPMX26_00132 at 144.265 kb on - strand, within MPMX26_00132 at 144.268 kb on - strand, within MPMX26_00132 at 144.270 kb on - strand, within MPMX26_00132 at 144.270 kb on - strand, within MPMX26_00132 at 144.270 kb on - strand, within MPMX26_00132 at 144.275 kb on - strand, within MPMX26_00132 at 144.275 kb on - strand, within MPMX26_00132 at 144.275 kb on - strand, within MPMX26_00132 at 144.275 kb on - strand, within MPMX26_00132 at 144.278 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.280 kb on - strand, within MPMX26_00132 at 144.283 kb on - strand, within MPMX26_00132 at 144.304 kb on - strand at 144.309 kb on - strand at 144.309 kb on - strand at 144.311 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.359 kb on - strand at 144.410 kb on - strand at 144.410 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.426 kb on - strand at 144.428 kb on - strand at 144.503 kb on - strand at 144.503 kb on - strand at 144.513 kb on - strand at 144.513 kb on - strand at 144.513 kb on - strand at 144.657 kb on + strand at 144.657 kb on + strand at 144.700 kb on + strand at 144.731 kb on + strand at 144.733 kb on + strand at 144.733 kb on + strand at 144.736 kb on + strand at 144.738 kb on + strand at 144.772 kb on + strand at 144.780 kb on + strand at 144.780 kb on + strand at 144.804 kb on + strand, within MPMX26_00133 at 144.819 kb on + strand, within MPMX26_00133 at 144.819 kb on + strand, within MPMX26_00133 at 144.819 kb on + strand, within MPMX26_00133 at 144.819 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.824 kb on + strand, within MPMX26_00133 at 144.831 kb on + strand, within MPMX26_00133 at 144.832 kb on - strand, within MPMX26_00133 at 144.860 kb on + strand, within MPMX26_00133 at 144.882 kb on + strand, within MPMX26_00133 at 144.921 kb on - strand, within MPMX26_00133 at 144.952 kb on + strand, within MPMX26_00133 at 144.999 kb on + strand, within MPMX26_00133 at 145.001 kb on + strand, within MPMX26_00133 at 145.001 kb on + strand, within MPMX26_00133 at 145.011 kb on + strand, within MPMX26_00133 at 145.011 kb on + strand, within MPMX26_00133 at 145.011 kb on + strand, within MPMX26_00133 at 145.011 kb on + strand, within MPMX26_00133 at 145.050 kb on + strand, within MPMX26_00133 at 145.056 kb on + strand, within MPMX26_00133 at 145.056 kb on + strand, within MPMX26_00133 at 145.056 kb on + strand, within MPMX26_00133 at 145.081 kb on + strand, within MPMX26_00133 at 145.081 kb on + strand, within MPMX26_00133 at 145.081 kb on + strand, within MPMX26_00133 at 145.081 kb on + strand, within MPMX26_00133 at 145.081 kb on + strand, within MPMX26_00133 at 145.083 kb on + strand, within MPMX26_00133 at 145.083 kb on + strand, within MPMX26_00133 at 145.083 kb on + strand, within MPMX26_00133 at 145.095 kb on + strand, within MPMX26_00133 at 145.119 kb on + strand, within MPMX26_00133 at 145.149 kb on + strand, within MPMX26_00133 at 145.157 kb on - strand, within MPMX26_00133 at 145.165 kb on + strand, within MPMX26_00133 at 145.193 kb on + strand, within MPMX26_00133 at 145.206 kb on - strand, within MPMX26_00133 at 145.275 kb on + strand, within MPMX26_00133 at 145.368 kb on + strand, within MPMX26_00133 at 145.386 kb on - strand, within MPMX26_00133 at 145.440 kb on + strand, within MPMX26_00133 at 145.469 kb on + strand, within MPMX26_00133 at 145.479 kb on + strand, within MPMX26_00133 at 145.479 kb on + strand, within MPMX26_00133 at 145.479 kb on + strand, within MPMX26_00133 at 145.502 kb on + strand, within MPMX26_00133 at 145.540 kb on + strand, within MPMX26_00133 at 145.563 kb on + strand, within MPMX26_00133 at 145.568 kb on + strand, within MPMX26_00133 at 145.600 kb on + strand at 145.600 kb on + strand at 145.609 kb on + strand at 145.609 kb on + strand at 145.610 kb on + strand at 145.624 kb on + strand at 145.632 kb on + strand at 145.634 kb on + strand at 145.726 kb on - strand at 145.738 kb on - strand at 145.738 kb on - strand at 145.738 kb on - strand at 145.738 kb on - strand at 145.738 kb on - strand at 145.743 kb on - strand at 145.746 kb on - strand at 145.748 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.776 kb on - strand at 145.785 kb on - strand, within MPMX26_00134 at 145.795 kb on - strand, within MPMX26_00134 at 145.811 kb on - strand, within MPMX26_00134 at 145.811 kb on - strand, within MPMX26_00134 at 145.811 kb on - strand, within MPMX26_00134 at 145.811 kb on - strand, within MPMX26_00134 at 145.811 kb on - strand, within MPMX26_00134 at 145.822 kb on - strand, within MPMX26_00134 at 145.832 kb on - strand, within MPMX26_00134 at 145.832 kb on - strand, within MPMX26_00134 at 145.842 kb on - strand, within MPMX26_00134 at 145.859 kb on - strand, within MPMX26_00134 at 145.924 kb on - strand, within MPMX26_00134 at 145.940 kb on - strand, within MPMX26_00134 at 145.943 kb on + strand, within MPMX26_00134 at 145.951 kb on - strand, within MPMX26_00134 at 145.968 kb on - strand, within MPMX26_00134 at 145.971 kb on - strand, within MPMX26_00134 at 145.999 kb on - strand, within MPMX26_00134 at 146.037 kb on - strand, within MPMX26_00134 at 146.042 kb on - strand, within MPMX26_00134 at 146.042 kb on - strand, within MPMX26_00134 at 146.042 kb on - strand, within MPMX26_00134 at 146.052 kb on - strand, within MPMX26_00134 at 146.141 kb on - strand, within MPMX26_00134 at 146.145 kb on - strand, within MPMX26_00134 at 146.155 kb on - strand, within MPMX26_00134 at 146.171 kb on - strand, within MPMX26_00134 at 146.171 kb on - strand, within MPMX26_00134 at 146.197 kb on - strand, within MPMX26_00134 at 146.267 kb on - strand, within MPMX26_00134 at 146.277 kb on - strand at 146.282 kb on - strand at 146.287 kb on - strand at 146.299 kb on - strand at 146.304 kb on - strand at 146.304 kb on - strand at 146.543 kb on + strand, within MPMX26_00135 at 146.553 kb on + strand, within MPMX26_00135
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 143,706 - MPMX26_00132 0.48 -0.6 143,785 - MPMX26_00132 0.53 -0.5 143,797 - MPMX26_00132 0.54 +0.1 143,797 - MPMX26_00132 0.54 -0.9 143,797 - MPMX26_00132 0.54 +1.3 143,797 - MPMX26_00132 0.54 +0.6 143,813 - MPMX26_00132 0.55 -0.2 143,862 - MPMX26_00132 0.59 -0.4 143,891 - MPMX26_00132 0.61 +1.9 143,915 - MPMX26_00132 0.62 -0.8 143,932 - MPMX26_00132 0.64 +0.3 143,969 + MPMX26_00132 0.66 +0.6 143,969 + MPMX26_00132 0.66 +3.3 143,977 - MPMX26_00132 0.67 -0.1 143,977 - MPMX26_00132 0.67 +2.3 143,977 - MPMX26_00132 0.67 +1.3 143,977 - MPMX26_00132 0.67 -0.0 144,017 - MPMX26_00132 0.70 +0.7 144,017 - MPMX26_00132 0.70 -0.9 144,017 - MPMX26_00132 0.70 +0.3 144,154 - MPMX26_00132 0.79 -0.0 144,154 - MPMX26_00132 0.79 +1.3 144,154 - MPMX26_00132 0.79 -0.5 144,154 - MPMX26_00132 0.79 +1.6 144,156 - MPMX26_00132 0.80 +0.6 144,204 - MPMX26_00132 0.83 +0.0 144,204 - MPMX26_00132 0.83 +1.1 144,214 - MPMX26_00132 0.84 -0.5 144,236 + MPMX26_00132 0.85 +1.3 144,246 - MPMX26_00132 0.86 -0.2 144,258 - MPMX26_00132 0.87 +0.6 144,258 - MPMX26_00132 0.87 +0.1 144,258 - MPMX26_00132 0.87 +0.2 144,258 - MPMX26_00132 0.87 -1.1 144,258 - MPMX26_00132 0.87 -0.7 144,258 - MPMX26_00132 0.87 -0.4 144,263 - MPMX26_00132 0.87 +0.4 144,263 - MPMX26_00132 0.87 +1.7 144,263 - MPMX26_00132 0.87 -0.2 144,263 - MPMX26_00132 0.87 +0.0 144,263 - MPMX26_00132 0.87 +2.2 144,263 - MPMX26_00132 0.87 +0.6 144,263 - MPMX26_00132 0.87 +0.2 144,265 - MPMX26_00132 0.87 -0.2 144,268 - MPMX26_00132 0.87 +0.6 144,270 - MPMX26_00132 0.88 +1.3 144,270 - MPMX26_00132 0.88 +0.0 144,270 - MPMX26_00132 0.88 +1.2 144,275 - MPMX26_00132 0.88 -0.4 144,275 - MPMX26_00132 0.88 +1.0 144,275 - MPMX26_00132 0.88 -0.6 144,275 - MPMX26_00132 0.88 +1.3 144,278 - MPMX26_00132 0.88 -0.2 144,280 - MPMX26_00132 0.88 +0.9 144,280 - MPMX26_00132 0.88 +1.8 144,280 - MPMX26_00132 0.88 +0.6 144,280 - MPMX26_00132 0.88 +1.1 144,280 - MPMX26_00132 0.88 +0.5 144,280 - MPMX26_00132 0.88 -0.2 144,280 - MPMX26_00132 0.88 -0.1 144,280 - MPMX26_00132 0.88 +0.9 144,280 - MPMX26_00132 0.88 -1.7 144,280 - MPMX26_00132 0.88 +1.0 144,280 - MPMX26_00132 0.88 -0.5 144,280 - MPMX26_00132 0.88 +0.6 144,280 - MPMX26_00132 0.88 -1.0 144,280 - MPMX26_00132 0.88 -0.7 144,280 - MPMX26_00132 0.88 +1.1 144,280 - MPMX26_00132 0.88 -0.2 144,280 - MPMX26_00132 0.88 +1.1 144,283 - MPMX26_00132 0.89 +0.2 144,304 - -0.7 144,309 - -0.5 144,309 - -0.2 144,311 - +0.2 144,359 - +0.3 144,359 - +0.5 144,359 - +0.1 144,359 - -0.5 144,359 - -0.4 144,359 - -0.4 144,359 - -0.6 144,359 - +1.9 144,359 - +0.6 144,359 - +1.1 144,359 - -0.1 144,359 - -0.7 144,359 - -1.8 144,359 - -0.7 144,359 - -0.9 144,410 - +0.7 144,410 - +0.7 144,426 - -0.4 144,426 - -0.3 144,426 - +0.1 144,426 - +0.0 144,426 - -0.1 144,426 - -0.5 144,426 - +0.2 144,426 - +0.5 144,428 - +0.4 144,503 - -1.2 144,503 - +0.3 144,513 - +1.2 144,513 - +0.3 144,513 - +1.5 144,657 + +0.3 144,657 + +0.6 144,700 + +0.6 144,731 + +0.8 144,733 + -0.8 144,733 + +1.3 144,736 + +0.2 144,738 + +0.3 144,772 + +0.3 144,780 + +1.1 144,780 + -2.2 144,804 + MPMX26_00133 0.10 +0.5 144,819 + MPMX26_00133 0.12 -0.4 144,819 + MPMX26_00133 0.12 +0.4 144,819 + MPMX26_00133 0.12 -2.5 144,819 + MPMX26_00133 0.12 +0.6 144,824 + MPMX26_00133 0.12 -0.3 144,824 + MPMX26_00133 0.12 +0.7 144,824 + MPMX26_00133 0.12 -0.3 144,824 + MPMX26_00133 0.12 +0.6 144,824 + MPMX26_00133 0.12 +0.0 144,824 + MPMX26_00133 0.12 -0.4 144,824 + MPMX26_00133 0.12 -0.6 144,824 + MPMX26_00133 0.12 -0.3 144,831 + MPMX26_00133 0.13 -0.2 144,832 - MPMX26_00133 0.13 +1.3 144,860 + MPMX26_00133 0.16 +0.0 144,882 + MPMX26_00133 0.18 +0.9 144,921 - MPMX26_00133 0.22 +2.3 144,952 + MPMX26_00133 0.26 -0.4 144,999 + MPMX26_00133 0.30 +1.2 145,001 + MPMX26_00133 0.31 +0.3 145,001 + MPMX26_00133 0.31 -0.4 145,011 + MPMX26_00133 0.32 +1.6 145,011 + MPMX26_00133 0.32 +1.2 145,011 + MPMX26_00133 0.32 -1.1 145,011 + MPMX26_00133 0.32 -0.5 145,050 + MPMX26_00133 0.36 +0.8 145,056 + MPMX26_00133 0.36 +0.8 145,056 + MPMX26_00133 0.36 -0.6 145,056 + MPMX26_00133 0.36 -0.6 145,081 + MPMX26_00133 0.39 -0.4 145,081 + MPMX26_00133 0.39 -0.8 145,081 + MPMX26_00133 0.39 -0.9 145,081 + MPMX26_00133 0.39 -0.8 145,081 + MPMX26_00133 0.39 +0.3 145,083 + MPMX26_00133 0.39 +1.0 145,083 + MPMX26_00133 0.39 -0.1 145,083 + MPMX26_00133 0.39 +0.9 145,095 + MPMX26_00133 0.40 +0.0 145,119 + MPMX26_00133 0.43 +0.4 145,149 + MPMX26_00133 0.46 +0.3 145,157 - MPMX26_00133 0.47 +0.6 145,165 + MPMX26_00133 0.48 +0.7 145,193 + MPMX26_00133 0.50 +0.2 145,206 - MPMX26_00133 0.52 +1.6 145,275 + MPMX26_00133 0.59 +0.3 145,368 + MPMX26_00133 0.69 +1.0 145,386 - MPMX26_00133 0.70 -0.3 145,440 + MPMX26_00133 0.76 +1.0 145,469 + MPMX26_00133 0.79 +0.1 145,479 + MPMX26_00133 0.80 +1.0 145,479 + MPMX26_00133 0.80 +0.9 145,479 + MPMX26_00133 0.80 -1.1 145,502 + MPMX26_00133 0.82 +1.7 145,540 + MPMX26_00133 0.86 +0.1 145,563 + MPMX26_00133 0.89 +1.9 145,568 + MPMX26_00133 0.89 -1.2 145,600 + +0.6 145,600 + +0.9 145,609 + -0.6 145,609 + -0.2 145,610 + +0.6 145,624 + -0.2 145,632 + -0.5 145,634 + +0.0 145,726 - -0.1 145,738 - -0.1 145,738 - +0.2 145,738 - -0.6 145,738 - +0.1 145,738 - +0.5 145,743 - +0.3 145,746 - +0.3 145,748 - -0.2 145,776 - -1.5 145,776 - +0.3 145,776 - +0.8 145,776 - +0.8 145,776 - +0.0 145,776 - -0.2 145,776 - -0.5 145,776 - -0.3 145,785 - MPMX26_00134 0.11 +0.3 145,795 - MPMX26_00134 0.13 -1.0 145,811 - MPMX26_00134 0.15 -0.5 145,811 - MPMX26_00134 0.15 -0.1 145,811 - MPMX26_00134 0.15 -0.2 145,811 - MPMX26_00134 0.15 -0.6 145,811 - MPMX26_00134 0.15 -0.1 145,822 - MPMX26_00134 0.17 -0.0 145,832 - MPMX26_00134 0.19 +1.2 145,832 - MPMX26_00134 0.19 -0.9 145,842 - MPMX26_00134 0.20 -0.5 145,859 - MPMX26_00134 0.23 -0.2 145,924 - MPMX26_00134 0.33 +0.1 145,940 - MPMX26_00134 0.36 +0.7 145,943 + MPMX26_00134 0.36 -0.2 145,951 - MPMX26_00134 0.38 +0.5 145,968 - MPMX26_00134 0.40 -0.1 145,971 - MPMX26_00134 0.41 -0.8 145,999 - MPMX26_00134 0.45 +1.9 146,037 - MPMX26_00134 0.51 +0.0 146,042 - MPMX26_00134 0.52 +1.0 146,042 - MPMX26_00134 0.52 +0.4 146,042 - MPMX26_00134 0.52 -0.0 146,052 - MPMX26_00134 0.54 +0.8 146,141 - MPMX26_00134 0.68 -0.5 146,145 - MPMX26_00134 0.69 -0.3 146,155 - MPMX26_00134 0.70 -0.5 146,171 - MPMX26_00134 0.73 +0.1 146,171 - MPMX26_00134 0.73 +0.3 146,197 - MPMX26_00134 0.77 -0.1 146,267 - MPMX26_00134 0.88 +1.0 146,277 - +0.0 146,282 - +0.1 146,287 - -0.5 146,299 - +0.5 146,304 - +0.0 146,304 - +0.6 146,543 + MPMX26_00135 0.48 -0.2 146,553 + MPMX26_00135 0.52 +0.3
Or see this region's nucleotide sequence