Experiment: Control_ECRC98_WM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsI and JDDGAC_14265 are separated by 15 nucleotides JDDGAC_14265 and rsmH overlap by 4 nucleotides rsmH and mraZ are separated by 1 nucleotides
JDDGAC_14260: ftsI - peptidoglycan glycosyltransferase FtsI, at 2,648,205 to 2,649,971
ftsI
JDDGAC_14265: JDDGAC_14265 - penicillin-binding protein PBP3 FtsI, at 2,649,987 to 2,650,352
_14265
JDDGAC_14270: rsmH - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 2,650,349 to 2,651,290
rsmH
JDDGAC_14275: mraZ - division/cell wall cluster transcriptional repressor MraZ, at 2,651,292 to 2,651,750
mraZ
Position (kb)
2650
2651
2652 Strain fitness (log2 ratio)
-2
-1
0
1 at 2650.635 kb on - strand, within rsmH at 2650.635 kb on - strand, within rsmH at 2650.635 kb on - strand, within rsmH at 2651.524 kb on - strand, within mraZ at 2651.899 kb on - strand at 2651.934 kb on - strand at 2651.940 kb on - strand at 2651.940 kb on - strand at 2652.000 kb on + strand at 2652.000 kb on + strand at 2652.000 kb on + strand at 2652.000 kb on + strand at 2652.002 kb on + strand at 2652.002 kb on + strand at 2652.003 kb on - strand at 2652.035 kb on - strand at 2652.035 kb on - strand at 2652.041 kb on + strand at 2652.041 kb on + strand at 2652.041 kb on + strand at 2652.041 kb on + strand at 2652.042 kb on - strand at 2652.042 kb on - strand at 2652.042 kb on - strand at 2652.042 kb on - strand at 2652.152 kb on - strand at 2652.160 kb on - strand at 2652.189 kb on - strand at 2652.192 kb on + strand at 2652.193 kb on - strand at 2652.193 kb on - strand at 2652.217 kb on - strand at 2652.217 kb on - strand at 2652.221 kb on - strand at 2652.249 kb on + strand at 2652.250 kb on - strand at 2652.253 kb on - strand at 2652.278 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Control_ECRC98_WM remove 2,650,635 - rsmH JDDGAC_14270 0.30 -0.3 2,650,635 - rsmH JDDGAC_14270 0.30 -0.9 2,650,635 - rsmH JDDGAC_14270 0.30 +0.6 2,651,524 - mraZ JDDGAC_14275 0.51 -0.5 2,651,899 - +0.9 2,651,934 - +0.2 2,651,940 - +0.2 2,651,940 - -0.8 2,652,000 + +0.4 2,652,000 + +0.4 2,652,000 + -0.4 2,652,000 + +0.1 2,652,002 + -0.7 2,652,002 + +0.7 2,652,003 - +0.4 2,652,035 - +0.6 2,652,035 - +0.1 2,652,041 + -0.9 2,652,041 + +1.1 2,652,041 + +0.4 2,652,041 + -0.2 2,652,042 - +1.1 2,652,042 - -1.3 2,652,042 - +0.2 2,652,042 - -2.6 2,652,152 - -0.4 2,652,160 - -0.4 2,652,189 - -0.6 2,652,192 + -0.6 2,652,193 - +0.4 2,652,193 - +0.4 2,652,217 - +0.4 2,652,217 - -1.8 2,652,221 - +1.4 2,652,249 + +0.1 2,652,250 - -0.9 2,652,253 - +0.5 2,652,278 - -0.6
Or see this region's nucleotide sequence