Strain Fitness in Erwinia amylovora T8 around OLJFJH_11440

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-3
2,387,013	+		OLJFJH_11435	0.64	-0.5
2,387,014	-		OLJFJH_11435	0.64	+0.0
2,387,174	+		OLJFJH_11435	0.70	+0.0
2,387,175	-		OLJFJH_11435	0.70	-0.8
2,387,177	+		OLJFJH_11435	0.70	-2.3
2,387,277	+		OLJFJH_11435	0.74	-1.0
2,387,277	+		OLJFJH_11435	0.74	-2.2
2,387,278	-		OLJFJH_11435	0.74	+0.3
2,387,278	-		OLJFJH_11435	0.74	-0.9
2,387,320	+		OLJFJH_11435	0.76	-1.3
2,387,354	+		OLJFJH_11435	0.77	-1.2
2,387,764	+				-2.1
2,387,765	-				-1.6
2,387,765	-				-2.7
2,387,777	+				-0.1
2,387,777	+				-0.1
2,387,777	+				-0.1
2,387,777	+				-0.8
2,387,778	-				-1.7
2,387,959	+				-1.7
2,388,079	-				-0.8
2,388,079	-				-0.3
2,388,235	-		OLJFJH_11440	0.25	-2.6
2,388,368	-		OLJFJH_11440	0.39	-2.1
2,388,406	+		OLJFJH_11440	0.43	-1.3
2,388,451	+		OLJFJH_11440	0.48	-3.1
2,388,519	+		OLJFJH_11440	0.54	-1.7
2,388,710	-		OLJFJH_11440	0.74	+1.3
2,388,710	-		OLJFJH_11440	0.74	-0.5
2,388,819	+		OLJFJH_11440	0.85	-1.0
2,388,819	+		OLJFJH_11440	0.85	-2.0
2,388,819	+		OLJFJH_11440	0.85	-1.6
2,388,832	-		OLJFJH_11440	0.87	-2.2
2,388,984	-				-1.5
2,389,090	+		OLJFJH_11445	0.21	-1.2
2,389,351	-		OLJFJH_11445	0.69	-0.0
2,389,369	+		OLJFJH_11445	0.72	-1.2
2,389,369	+		OLJFJH_11445	0.72	-1.4
2,389,418	-		OLJFJH_11445	0.81	-2.9
2,389,419	+		OLJFJH_11445	0.82	-1.2
2,389,420	-		OLJFJH_11445	0.82	-1.1
2,389,511	+				+0.3
2,389,545	-				-0.7
2,389,606	-		OLJFJH_11450	0.14	-1.0
2,389,620	-		OLJFJH_11450	0.16	-0.3
2,389,674	-		OLJFJH_11450	0.26	+0.9
2,389,696	+		OLJFJH_11450	0.30	-2.8
2,389,718	-		OLJFJH_11450	0.34	-1.7
2,389,853	+		OLJFJH_11450	0.58	-0.2
2,389,853	+		OLJFJH_11450	0.58	-1.9
2,389,854	-		OLJFJH_11450	0.59	-0.5
2,389,854	-		OLJFJH_11450	0.59	-2.2
2,389,854	-		OLJFJH_11450	0.59	-0.0
2,389,938	-		OLJFJH_11450	0.74	+0.1
2,389,938	-		OLJFJH_11450	0.74	+1.5