Strain Fitness in Erwinia amylovora T8 around OLJFJH_07285

Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:28;Samp:16-3
1,483,234	+		OLJFJH_07280	0.48	+1.4
1,483,234	+		OLJFJH_07280	0.48	+1.0
1,483,235	-		OLJFJH_07280	0.48	-1.0
1,483,235	-		OLJFJH_07280	0.48	-1.7
1,483,267	+		OLJFJH_07280	0.51	+1.4
1,483,268	-		OLJFJH_07280	0.51	-0.6
1,483,268	-		OLJFJH_07280	0.51	+3.7
1,483,268	-		OLJFJH_07280	0.51	-0.6
1,483,398	+		OLJFJH_07280	0.64	+1.9
1,483,398	+		OLJFJH_07280	0.64	+1.7
1,483,398	+		OLJFJH_07280	0.64	+1.4
1,483,399	-		OLJFJH_07280	0.64	-0.5
1,483,399	-		OLJFJH_07280	0.64	+0.3
1,483,399	-		OLJFJH_07280	0.64	-0.1
1,483,399	-		OLJFJH_07280	0.64	+0.2
1,483,515	+		OLJFJH_07280	0.75	+1.3
1,483,515	+		OLJFJH_07280	0.75	+2.8
1,483,515	+		OLJFJH_07280	0.75	+1.6
1,483,515	+		OLJFJH_07280	0.75	+2.1
1,483,516	-		OLJFJH_07280	0.76	+0.2
1,483,563	-		OLJFJH_07280	0.80	+2.1
1,483,605	+		OLJFJH_07280	0.84	+1.7
1,483,605	+		OLJFJH_07280	0.84	+4.5
1,483,605	+		OLJFJH_07280	0.84	+4.9
1,483,605	+		OLJFJH_07280	0.84	-0.4
1,483,606	-		OLJFJH_07280	0.85	+0.3
1,483,606	-		OLJFJH_07280	0.85	-0.7
1,483,606	-		OLJFJH_07280	0.85	+0.3
1,483,606	-		OLJFJH_07280	0.85	-0.0
1,483,677	+				+0.7
1,483,677	+				+1.4
1,483,761	+				+0.7
1,483,773	+				+2.6
1,483,773	+				+1.6
1,483,773	+				+4.2
1,483,774	-				-0.2
1,483,788	-				+0.9
1,483,788	-				-0.0
1,483,856	-				-0.6
1,483,866	+				+1.2
1,483,870	+				+2.4
1,483,871	-				-0.4
1,483,871	-				+0.4
1,483,921	+				+2.7
1,483,954	+				+3.5
1,483,970	-				-0.4
1,483,971	+				+3.6
1,483,972	-				+0.5
1,484,144	+				+5.2
1,484,159	+				+1.5
1,484,162	+				-0.5
1,484,163	-				-1.7
1,484,212	+				+0.2
1,484,212	+				-0.8
1,484,214	+				-0.5
1,484,215	-				-1.7
1,484,215	-				-0.7
1,484,223	-				-0.7
1,484,309	+		OLJFJH_07285	0.18	-1.3
1,484,333	+		OLJFJH_07285	0.23	-1.9
1,484,333	+		OLJFJH_07285	0.23	+0.0
1,484,336	+		OLJFJH_07285	0.23	-0.7
1,484,439	-		OLJFJH_07285	0.44	-0.5
1,484,465	+		OLJFJH_07285	0.49	-0.1
1,484,465	+		OLJFJH_07285	0.49	-1.8
1,484,465	+		OLJFJH_07285	0.49	-1.8
1,484,466	-		OLJFJH_07285	0.49	-1.0
1,484,466	-		OLJFJH_07285	0.49	-1.5
1,484,466	-		OLJFJH_07285	0.49	-1.1
1,484,470	-		OLJFJH_07285	0.50	-0.6
1,484,470	-		OLJFJH_07285	0.50	-0.9
1,484,470	-		OLJFJH_07285	0.50	-0.6
1,484,470	-		OLJFJH_07285	0.50	-1.5
1,484,516	+		OLJFJH_07285	0.59	-1.8
1,484,517	-		OLJFJH_07285	0.59	-2.3
1,484,517	-		OLJFJH_07285	0.59	+0.8
1,484,564	-		OLJFJH_07285	0.69	-1.5
1,484,564	-		OLJFJH_07285	0.69	-0.1
1,484,618	+		OLJFJH_07285	0.79	-0.7
1,484,618	+		OLJFJH_07285	0.79	-0.3
1,484,619	-		OLJFJH_07285	0.80	-1.6
1,484,649	+				-0.5
1,484,650	-				-0.3
1,484,786	+		OLJFJH_07290	0.38	+0.9
1,484,947	+		OLJFJH_07290	0.82	-0.8
1,484,948	-		OLJFJH_07290	0.83	-0.7
1,484,977	+				+0.2
1,484,978	-				-1.0
1,484,978	-				+1.0
1,484,978	-				-1.0
1,484,978	-				-0.5
1,485,011	+				-0.1
1,485,011	+				+1.3
1,485,011	+				-0.6
1,485,011	+				+0.1
1,485,011	+				+1.0
1,485,011	+				-0.9
1,485,011	+				-0.2
1,485,011	+				+0.2
1,485,011	+				+4.0
1,485,012	-				-0.2
1,485,012	-				-1.0
1,485,012	-				-0.1
1,485,012	-				+1.4
1,485,012	-				-0.2
1,485,012	-				+0.2
1,485,012	-				-0.4
1,485,012	-				-0.8
1,485,012	-				-1.0
1,485,046	-				-0.0
1,485,070	-				+1.1
1,485,156	-				+1.1
1,485,217	+		OLJFJH_07295	0.20	-0.8
1,485,217	+		OLJFJH_07295	0.20	+0.6
1,485,217	+		OLJFJH_07295	0.20	-1.5
1,485,217	+		OLJFJH_07295	0.20	-0.1
1,485,217	+		OLJFJH_07295	0.20	+0.1
1,485,217	+		OLJFJH_07295	0.20	-0.4
1,485,218	-		OLJFJH_07295	0.21	-0.2
1,485,218	-		OLJFJH_07295	0.21	-0.1
1,485,218	-		OLJFJH_07295	0.21	-0.6
1,485,218	-		OLJFJH_07295	0.21	+0.2
1,485,218	-		OLJFJH_07295	0.21	-0.9
1,485,218	-		OLJFJH_07295	0.21	+0.5
1,485,218	-		OLJFJH_07295	0.21	+0.1
1,485,218	-		OLJFJH_07295	0.21	+1.2
1,485,218	-		OLJFJH_07295	0.21	-0.3
1,485,218	-		OLJFJH_07295	0.21	-1.4
1,485,220	-		OLJFJH_07295	0.21	+0.3
1,485,228	-		OLJFJH_07295	0.23	-0.5
1,485,308	-		OLJFJH_07295	0.43	+0.3
1,485,330	-		OLJFJH_07295	0.49	+3.4
1,485,337	-		OLJFJH_07295	0.50	-0.2
1,485,337	-		OLJFJH_07295	0.50	+0.3
1,485,337	-		OLJFJH_07295	0.50	+0.0
1,485,337	-		OLJFJH_07295	0.50	-0.7
1,485,377	+		OLJFJH_07295	0.60	+1.9
1,485,389	+		OLJFJH_07295	0.63	+3.1
1,485,390	-		OLJFJH_07295	0.64	+1.8
1,485,390	-		OLJFJH_07295	0.64	+0.8
1,485,440	+		OLJFJH_07295	0.76	-2.0
1,485,523	-				+1.2
1,485,529	+				-0.1
1,485,529	+				-0.1
1,485,530	-				+3.8
1,485,677	+		OLJFJH_07300	0.28	+0.7
1,485,719	-		OLJFJH_07300	0.37	+0.2