Experiment: Matrix:pear;Phage:PBS;Temp:28;Samp:16-3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04365 and OLJFJH_04370 are separated by 288 nucleotides OLJFJH_04370 and OLJFJH_04375 overlap by 11 nucleotides OLJFJH_04375 and OLJFJH_04380 are separated by 5 nucleotides
OLJFJH_04365: OLJFJH_04365 - RNA polymerase sigma factor RpoH, at 841,745 to 842,599
_04365
OLJFJH_04370: OLJFJH_04370 - permease-like cell division protein FtsX, at 842,888 to 843,880
_04370
OLJFJH_04375: OLJFJH_04375 - cell division ATP-binding protein FtsE, at 843,870 to 844,538
_04375
OLJFJH_04380: OLJFJH_04380 - signal recognition particle-docking protein FtsY, at 844,544 to 846,028
_04380
Position (kb) 842
843
844 Strain fitness (log2 ratio) -1
0
1
2
3
4
5 at 842.660 kb on - strand at 842.679 kb on + strand at 842.680 kb on - strand at 842.810 kb on + strand at 842.810 kb on + strand at 842.811 kb on - strand at 842.863 kb on + strand at 842.864 kb on - strand at 842.864 kb on - strand at 842.864 kb on - strand at 842.865 kb on + strand at 842.890 kb on - strand at 842.890 kb on - strand at 843.127 kb on - strand, within OLJFJH_04370 at 843.128 kb on + strand, within OLJFJH_04370 at 843.128 kb on + strand, within OLJFJH_04370 at 843.129 kb on - strand, within OLJFJH_04370 at 843.129 kb on - strand, within OLJFJH_04370 at 843.224 kb on - strand, within OLJFJH_04370 at 843.354 kb on - strand, within OLJFJH_04370 at 843.386 kb on - strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.522 kb on + strand, within OLJFJH_04370 at 843.523 kb on - strand, within OLJFJH_04370 at 843.527 kb on - strand, within OLJFJH_04370 at 843.598 kb on + strand, within OLJFJH_04370 at 843.602 kb on + strand, within OLJFJH_04370 at 843.603 kb on - strand, within OLJFJH_04370 at 843.607 kb on - strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.670 kb on + strand, within OLJFJH_04370 at 843.671 kb on - strand, within OLJFJH_04370 at 843.671 kb on - strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.672 kb on + strand, within OLJFJH_04370 at 843.673 kb on - strand, within OLJFJH_04370 at 843.673 kb on - strand, within OLJFJH_04370 at 843.893 kb on - strand at 843.894 kb on + strand at 843.929 kb on + strand at 843.930 kb on - strand at 844.249 kb on + strand, within OLJFJH_04375 at 844.364 kb on + strand, within OLJFJH_04375 at 844.508 kb on - strand at 844.545 kb on + strand at 844.545 kb on + strand at 844.545 kb on + strand at 844.546 kb on - strand at 844.546 kb on - strand at 844.546 kb on - strand at 844.546 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:28;Samp:16-3 remove 842,660 - -0.7 842,679 + +5.5 842,680 - -0.1 842,810 + -1.0 842,810 + +1.6 842,811 - +0.2 842,863 + -0.9 842,864 - -0.2 842,864 - -0.4 842,864 - +0.8 842,865 + -0.3 842,890 - +1.0 842,890 - -0.0 843,127 - OLJFJH_04370 0.24 +1.0 843,128 + OLJFJH_04370 0.24 -0.3 843,128 + OLJFJH_04370 0.24 -1.5 843,129 - OLJFJH_04370 0.24 -0.8 843,129 - OLJFJH_04370 0.24 -0.0 843,224 - OLJFJH_04370 0.34 -0.5 843,354 - OLJFJH_04370 0.47 +0.5 843,386 - OLJFJH_04370 0.50 -0.9 843,522 + OLJFJH_04370 0.64 -0.5 843,522 + OLJFJH_04370 0.64 -0.6 843,522 + OLJFJH_04370 0.64 -1.2 843,523 - OLJFJH_04370 0.64 +1.2 843,527 - OLJFJH_04370 0.64 +0.2 843,598 + OLJFJH_04370 0.72 +1.2 843,602 + OLJFJH_04370 0.72 +0.2 843,603 - OLJFJH_04370 0.72 -0.7 843,607 - OLJFJH_04370 0.72 +0.1 843,670 + OLJFJH_04370 0.79 +0.5 843,670 + OLJFJH_04370 0.79 -0.0 843,670 + OLJFJH_04370 0.79 -0.8 843,671 - OLJFJH_04370 0.79 -1.3 843,671 - OLJFJH_04370 0.79 -1.0 843,672 + OLJFJH_04370 0.79 -0.6 843,672 + OLJFJH_04370 0.79 -0.0 843,672 + OLJFJH_04370 0.79 +0.2 843,672 + OLJFJH_04370 0.79 +1.5 843,672 + OLJFJH_04370 0.79 -0.2 843,673 - OLJFJH_04370 0.79 +0.2 843,673 - OLJFJH_04370 0.79 -1.3 843,893 - -0.0 843,894 + -0.0 843,929 + +3.0 843,930 - +1.2 844,249 + OLJFJH_04375 0.57 +3.7 844,364 + OLJFJH_04375 0.74 +1.0 844,508 - -1.0 844,545 + -0.5 844,545 + +0.5 844,545 + -1.2 844,546 - +0.3 844,546 - -0.9 844,546 - -0.0 844,546 - +2.0
Or see this region's nucleotide sequence