Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS14205

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS14195 and A4249_RS14200 are separated by 13 nucleotidesA4249_RS14200 and A4249_RS14205 are separated by 117 nucleotidesA4249_RS14205 and A4249_RS14210 are separated by 173 nucleotides A4249_RS14195: A4249_RS14195 - metallophosphoesterase, at 2,859,409 to 2,860,182 _RS14195 A4249_RS14200: A4249_RS14200 - nucleotidyltransferase family protein, at 2,860,196 to 2,860,984 _RS14200 A4249_RS14205: A4249_RS14205 - response regulator, at 2,861,102 to 2,863,240 _RS14205 A4249_RS14210: A4249_RS14210 - ribonucleotide-diphosphate reductase subunit beta, at 2,863,414 to 2,864,463 _RS14210 Position (kb) 2861 2862 2863 2864Strain fitness (log2 ratio) -2 -1 0 1at 2860.190 kb on + strandat 2860.205 kb on + strandat 2860.205 kb on + strandat 2860.206 kb on - strandat 2860.206 kb on - strandat 2860.206 kb on - strandat 2860.284 kb on + strand, within A4249_RS14200at 2860.284 kb on + strand, within A4249_RS14200at 2860.284 kb on + strand, within A4249_RS14200at 2860.285 kb on - strand, within A4249_RS14200at 2860.285 kb on - strand, within A4249_RS14200at 2860.413 kb on + strand, within A4249_RS14200at 2860.458 kb on + strand, within A4249_RS14200at 2860.458 kb on + strand, within A4249_RS14200at 2860.458 kb on + strand, within A4249_RS14200at 2860.458 kb on + strand, within A4249_RS14200at 2860.459 kb on - strand, within A4249_RS14200at 2860.459 kb on - strand, within A4249_RS14200at 2860.459 kb on - strand, within A4249_RS14200at 2860.459 kb on - strand, within A4249_RS14200at 2860.459 kb on - strand, within A4249_RS14200at 2860.543 kb on - strand, within A4249_RS14200at 2860.617 kb on + strand, within A4249_RS14200at 2860.617 kb on + strand, within A4249_RS14200at 2860.617 kb on + strand, within A4249_RS14200at 2860.617 kb on + strand, within A4249_RS14200at 2860.617 kb on + strand, within A4249_RS14200at 2860.618 kb on - strand, within A4249_RS14200at 2860.618 kb on - strand, within A4249_RS14200at 2860.618 kb on - strand, within A4249_RS14200at 2860.794 kb on + strand, within A4249_RS14200at 2860.851 kb on + strand, within A4249_RS14200at 2860.851 kb on + strand, within A4249_RS14200at 2860.851 kb on + strand, within A4249_RS14200at 2860.851 kb on + strand, within A4249_RS14200at 2860.851 kb on + strand, within A4249_RS14200at 2860.852 kb on - strand, within A4249_RS14200at 2860.852 kb on - strand, within A4249_RS14200at 2860.852 kb on - strand, within A4249_RS14200at 2860.852 kb on - strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.866 kb on + strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.867 kb on - strand, within A4249_RS14200at 2860.926 kb on + strandat 2860.926 kb on + strandat 2860.926 kb on + strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2860.927 kb on - strandat 2861.016 kb on - strandat 2861.049 kb on + strandat 2861.049 kb on + strandat 2861.049 kb on + strandat 2861.049 kb on + strandat 2861.050 kb on - strandat 2861.053 kb on + strandat 2861.053 kb on + strandat 2861.053 kb on + strandat 2861.053 kb on + strandat 2861.053 kb on + strandat 2861.054 kb on - strandat 2861.054 kb on - strandat 2861.054 kb on - strandat 2861.076 kb on + strandat 2861.076 kb on + strandat 2861.076 kb on + strandat 2861.077 kb on - strandat 2861.077 kb on - strandat 2861.096 kb on + strandat 2861.097 kb on - strandat 2861.097 kb on - strandat 2861.097 kb on - strandat 2861.186 kb on + strandat 2861.186 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.192 kb on + strandat 2861.193 kb on - strandat 2861.193 kb on - strandat 2861.193 kb on - strandat 2861.770 kb on + strand, within A4249_RS14205at 2862.198 kb on - strand, within A4249_RS14205at 2863.178 kb on + strandat 2863.178 kb on + strandat 2863.179 kb on - strandat 2863.179 kb on - strandat 2863.304 kb on + strandat 2863.334 kb on + strandat 2863.334 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,860,190 + -1.4
2,860,205 + -0.3
2,860,205 + -0.8
2,860,206 - -0.0
2,860,206 - -0.9
2,860,206 - -1.6
2,860,284 + A4249_RS14200 0.11 -0.5
2,860,284 + A4249_RS14200 0.11 -1.1
2,860,284 + A4249_RS14200 0.11 -0.4
2,860,285 - A4249_RS14200 0.11 -1.7
2,860,285 - A4249_RS14200 0.11 -1.7
2,860,413 + A4249_RS14200 0.28 -0.3
2,860,458 + A4249_RS14200 0.33 +0.6
2,860,458 + A4249_RS14200 0.33 -0.3
2,860,458 + A4249_RS14200 0.33 -0.2
2,860,458 + A4249_RS14200 0.33 +0.2
2,860,459 - A4249_RS14200 0.33 -1.4
2,860,459 - A4249_RS14200 0.33 -1.3
2,860,459 - A4249_RS14200 0.33 -0.3
2,860,459 - A4249_RS14200 0.33 -1.6
2,860,459 - A4249_RS14200 0.33 +0.1
2,860,543 - A4249_RS14200 0.44 -1.7
2,860,617 + A4249_RS14200 0.53 -1.2
2,860,617 + A4249_RS14200 0.53 +0.3
2,860,617 + A4249_RS14200 0.53 -0.7
2,860,617 + A4249_RS14200 0.53 +0.2
2,860,617 + A4249_RS14200 0.53 -0.9
2,860,618 - A4249_RS14200 0.53 -0.3
2,860,618 - A4249_RS14200 0.53 +0.1
2,860,618 - A4249_RS14200 0.53 +0.3
2,860,794 + A4249_RS14200 0.76 -1.3
2,860,851 + A4249_RS14200 0.83 +0.3
2,860,851 + A4249_RS14200 0.83 -1.0
2,860,851 + A4249_RS14200 0.83 +0.5
2,860,851 + A4249_RS14200 0.83 -0.5
2,860,851 + A4249_RS14200 0.83 -0.5
2,860,852 - A4249_RS14200 0.83 +0.1
2,860,852 - A4249_RS14200 0.83 +0.9
2,860,852 - A4249_RS14200 0.83 +0.3
2,860,852 - A4249_RS14200 0.83 -0.5
2,860,866 + A4249_RS14200 0.85 +0.0
2,860,866 + A4249_RS14200 0.85 -0.9
2,860,866 + A4249_RS14200 0.85 -0.5
2,860,866 + A4249_RS14200 0.85 -1.2
2,860,866 + A4249_RS14200 0.85 +0.7
2,860,866 + A4249_RS14200 0.85 +0.6
2,860,866 + A4249_RS14200 0.85 -0.8
2,860,866 + A4249_RS14200 0.85 -0.0
2,860,867 - A4249_RS14200 0.85 +1.1
2,860,867 - A4249_RS14200 0.85 +0.1
2,860,867 - A4249_RS14200 0.85 +0.5
2,860,867 - A4249_RS14200 0.85 -1.3
2,860,867 - A4249_RS14200 0.85 -1.6
2,860,867 - A4249_RS14200 0.85 -0.4
2,860,867 - A4249_RS14200 0.85 +0.5
2,860,867 - A4249_RS14200 0.85 -0.6
2,860,867 - A4249_RS14200 0.85 +0.2
2,860,867 - A4249_RS14200 0.85 -0.5
2,860,867 - A4249_RS14200 0.85 +0.4
2,860,867 - A4249_RS14200 0.85 -0.6
2,860,867 - A4249_RS14200 0.85 +1.0
2,860,926 + +0.1
2,860,926 + -0.5
2,860,926 + -0.1
2,860,927 - -0.3
2,860,927 - +0.2
2,860,927 - -1.1
2,860,927 - +0.2
2,860,927 - -0.4
2,860,927 - -0.8
2,860,927 - -0.2
2,860,927 - -0.0
2,861,016 - -1.4
2,861,049 + -0.0
2,861,049 + -0.3
2,861,049 + +0.2
2,861,049 + -1.4
2,861,050 - -0.4
2,861,053 + -0.1
2,861,053 + +0.4
2,861,053 + +0.6
2,861,053 + -0.4
2,861,053 + +1.0
2,861,054 - +0.1
2,861,054 - -0.4
2,861,054 - -0.6
2,861,076 + +0.6
2,861,076 + +0.4
2,861,076 + +0.3
2,861,077 - -0.1
2,861,077 - +0.3
2,861,096 + -0.1
2,861,097 - -0.0
2,861,097 - -0.7
2,861,097 - +0.5
2,861,186 + +0.2
2,861,186 + -0.6
2,861,192 + -2.5
2,861,192 + -0.1
2,861,192 + -0.1
2,861,192 + -0.8
2,861,192 + +1.1
2,861,192 + +0.9
2,861,192 + +0.6
2,861,192 + +0.4
2,861,192 + -0.8
2,861,192 + +0.2
2,861,192 + -0.0
2,861,193 - +0.7
2,861,193 - -0.2
2,861,193 - -0.1
2,861,770 + A4249_RS14205 0.31 -0.9
2,862,198 - A4249_RS14205 0.51 -0.7
2,863,178 + +0.1
2,863,178 + +0.8
2,863,179 - +1.5
2,863,179 - -0.5
2,863,304 + -1.9
2,863,334 + -0.7
2,863,334 + -0.5

Or see this region's nucleotide sequence