Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13065

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13060 and A4249_RS13065 are separated by 92 nucleotidesA4249_RS13065 and A4249_RS13070 are separated by 39 nucleotides A4249_RS13060: A4249_RS13060 - AGE family epimerase/isomerase, at 2,624,923 to 2,627,139 _RS13060 A4249_RS13065: A4249_RS13065 - glycosyltransferase family 1 protein, at 2,627,232 to 2,628,317 _RS13065 A4249_RS13070: A4249_RS13070 - phosphomannomutase/phosphoglucomutase, at 2,628,357 to 2,629,856 _RS13070 Position (kb) 2627 2628 2629Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.240 kb on + strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.241 kb on - strand, within A4249_RS13060at 2626.315 kb on + strand, within A4249_RS13060at 2626.316 kb on - strand, within A4249_RS13060at 2626.316 kb on - strand, within A4249_RS13060at 2626.316 kb on - strand, within A4249_RS13060at 2626.412 kb on + strand, within A4249_RS13060at 2626.412 kb on + strand, within A4249_RS13060at 2626.412 kb on + strand, within A4249_RS13060at 2626.412 kb on + strand, within A4249_RS13060at 2626.412 kb on + strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.413 kb on - strand, within A4249_RS13060at 2626.416 kb on + strand, within A4249_RS13060at 2626.416 kb on + strand, within A4249_RS13060at 2626.417 kb on - strand, within A4249_RS13060at 2626.417 kb on - strand, within A4249_RS13060at 2626.417 kb on - strand, within A4249_RS13060at 2626.443 kb on - strand, within A4249_RS13060at 2626.465 kb on + strand, within A4249_RS13060at 2626.466 kb on - strand, within A4249_RS13060at 2626.466 kb on - strand, within A4249_RS13060at 2626.562 kb on + strand, within A4249_RS13060at 2626.563 kb on - strand, within A4249_RS13060at 2626.603 kb on + strand, within A4249_RS13060at 2626.603 kb on + strand, within A4249_RS13060at 2626.697 kb on + strand, within A4249_RS13060at 2626.697 kb on + strand, within A4249_RS13060at 2626.697 kb on + strand, within A4249_RS13060at 2626.697 kb on + strand, within A4249_RS13060at 2626.698 kb on - strand, within A4249_RS13060at 2626.759 kb on + strand, within A4249_RS13060at 2626.759 kb on + strand, within A4249_RS13060at 2626.759 kb on + strand, within A4249_RS13060at 2626.759 kb on + strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.760 kb on - strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.805 kb on + strand, within A4249_RS13060at 2626.806 kb on - strand, within A4249_RS13060at 2626.806 kb on - strand, within A4249_RS13060at 2626.887 kb on + strand, within A4249_RS13060at 2626.888 kb on - strand, within A4249_RS13060at 2626.888 kb on - strand, within A4249_RS13060at 2626.888 kb on - strand, within A4249_RS13060at 2626.889 kb on + strand, within A4249_RS13060at 2626.889 kb on + strand, within A4249_RS13060at 2626.889 kb on + strand, within A4249_RS13060at 2626.890 kb on - strand, within A4249_RS13060at 2626.901 kb on + strand, within A4249_RS13060at 2626.901 kb on + strand, within A4249_RS13060at 2626.914 kb on + strand, within A4249_RS13060at 2626.914 kb on + strand, within A4249_RS13060at 2626.914 kb on + strand, within A4249_RS13060at 2626.969 kb on + strandat 2626.970 kb on - strandat 2627.053 kb on + strandat 2627.053 kb on + strandat 2627.053 kb on + strandat 2627.053 kb on + strandat 2627.054 kb on - strandat 2627.054 kb on - strandat 2627.054 kb on - strandat 2627.071 kb on + strandat 2627.072 kb on - strandat 2627.112 kb on + strandat 2627.113 kb on - strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.114 kb on + strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.115 kb on - strandat 2627.135 kb on + strandat 2627.135 kb on + strandat 2627.136 kb on - strandat 2627.136 kb on - strandat 2627.137 kb on + strandat 2627.137 kb on + strandat 2627.138 kb on - strandat 2627.138 kb on - strandat 2627.187 kb on + strandat 2627.187 kb on + strandat 2627.187 kb on + strandat 2627.202 kb on + strandat 2627.202 kb on + strandat 2627.202 kb on + strandat 2628.350 kb on + strandat 2628.350 kb on + strandat 2628.350 kb on + strandat 2628.350 kb on + strandat 2628.350 kb on + strandat 2628.350 kb on + strandat 2628.351 kb on - strandat 2628.351 kb on - strandat 2628.389 kb on + strandat 2628.390 kb on - strandat 2628.399 kb on + strandat 2628.399 kb on + strandat 2628.400 kb on - strandat 2628.441 kb on + strandat 2628.442 kb on - strandat 2628.442 kb on - strandat 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.516 kb on + strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.517 kb on - strand, within A4249_RS13070at 2628.518 kb on + strand, within A4249_RS13070at 2628.573 kb on + strand, within A4249_RS13070at 2628.575 kb on + strand, within A4249_RS13070at 2628.576 kb on - strand, within A4249_RS13070at 2628.576 kb on - strand, within A4249_RS13070at 2628.576 kb on - strand, within A4249_RS13070at 2628.576 kb on - strand, within A4249_RS13070at 2628.576 kb on - strand, within A4249_RS13070at 2628.666 kb on + strand, within A4249_RS13070at 2628.666 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.879 kb on + strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2628.880 kb on - strand, within A4249_RS13070at 2629.026 kb on + strand, within A4249_RS13070at 2629.026 kb on + strand, within A4249_RS13070at 2629.027 kb on - strand, within A4249_RS13070at 2629.027 kb on - strand, within A4249_RS13070at 2629.041 kb on + strand, within A4249_RS13070at 2629.041 kb on + strand, within A4249_RS13070at 2629.041 kb on + strand, within A4249_RS13070at 2629.042 kb on - strand, within A4249_RS13070at 2629.272 kb on + strand, within A4249_RS13070at 2629.273 kb on - strand, within A4249_RS13070at 2629.273 kb on - strand, within A4249_RS13070at 2629.273 kb on - strand, within A4249_RS13070at 2629.317 kb on + strand, within A4249_RS13070at 2629.317 kb on + strand, within A4249_RS13070at 2629.317 kb on + strand, within A4249_RS13070at 2629.317 kb on + strand, within A4249_RS13070at 2629.317 kb on + strand, within A4249_RS13070

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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2,626,240 + A4249_RS13060 0.59 -1.0
2,626,240 + A4249_RS13060 0.59 +0.3
2,626,240 + A4249_RS13060 0.59 +0.9
2,626,240 + A4249_RS13060 0.59 +0.2
2,626,240 + A4249_RS13060 0.59 +2.9
2,626,240 + A4249_RS13060 0.59 -0.6
2,626,240 + A4249_RS13060 0.59 +0.3
2,626,240 + A4249_RS13060 0.59 +1.9
2,626,241 - A4249_RS13060 0.59 +1.3
2,626,241 - A4249_RS13060 0.59 -1.0
2,626,241 - A4249_RS13060 0.59 -1.2
2,626,241 - A4249_RS13060 0.59 +1.1
2,626,241 - A4249_RS13060 0.59 -0.5
2,626,241 - A4249_RS13060 0.59 -1.3
2,626,241 - A4249_RS13060 0.59 -0.2
2,626,241 - A4249_RS13060 0.59 -0.1
2,626,315 + A4249_RS13060 0.63 +0.5
2,626,316 - A4249_RS13060 0.63 +0.7
2,626,316 - A4249_RS13060 0.63 +0.9
2,626,316 - A4249_RS13060 0.63 +1.1
2,626,412 + A4249_RS13060 0.67 +1.1
2,626,412 + A4249_RS13060 0.67 +0.3
2,626,412 + A4249_RS13060 0.67 -0.1
2,626,412 + A4249_RS13060 0.67 +1.1
2,626,412 + A4249_RS13060 0.67 +0.1
2,626,413 - A4249_RS13060 0.67 +1.5
2,626,413 - A4249_RS13060 0.67 -0.7
2,626,413 - A4249_RS13060 0.67 +1.2
2,626,413 - A4249_RS13060 0.67 +0.9
2,626,413 - A4249_RS13060 0.67 -0.0
2,626,413 - A4249_RS13060 0.67 +0.3
2,626,413 - A4249_RS13060 0.67 -0.5
2,626,413 - A4249_RS13060 0.67 +0.5
2,626,416 + A4249_RS13060 0.67 +0.5
2,626,416 + A4249_RS13060 0.67 +0.6
2,626,417 - A4249_RS13060 0.67 +0.1
2,626,417 - A4249_RS13060 0.67 +0.9
2,626,417 - A4249_RS13060 0.67 +1.3
2,626,443 - A4249_RS13060 0.69 -2.0
2,626,465 + A4249_RS13060 0.70 +1.3
2,626,466 - A4249_RS13060 0.70 -0.3
2,626,466 - A4249_RS13060 0.70 -0.7
2,626,562 + A4249_RS13060 0.74 -0.7
2,626,563 - A4249_RS13060 0.74 +1.1
2,626,603 + A4249_RS13060 0.76 -1.1
2,626,603 + A4249_RS13060 0.76 -0.1
2,626,697 + A4249_RS13060 0.80 -1.0
2,626,697 + A4249_RS13060 0.80 +1.1
2,626,697 + A4249_RS13060 0.80 -0.9
2,626,697 + A4249_RS13060 0.80 -0.6
2,626,698 - A4249_RS13060 0.80 +1.3
2,626,759 + A4249_RS13060 0.83 +0.7
2,626,759 + A4249_RS13060 0.83 +0.5
2,626,759 + A4249_RS13060 0.83 -0.3
2,626,759 + A4249_RS13060 0.83 +1.1
2,626,760 - A4249_RS13060 0.83 -1.4
2,626,760 - A4249_RS13060 0.83 -0.1
2,626,760 - A4249_RS13060 0.83 -0.3
2,626,760 - A4249_RS13060 0.83 -0.2
2,626,760 - A4249_RS13060 0.83 +0.9
2,626,760 - A4249_RS13060 0.83 +0.9
2,626,760 - A4249_RS13060 0.83 +0.0
2,626,760 - A4249_RS13060 0.83 -1.4
2,626,760 - A4249_RS13060 0.83 +1.5
2,626,805 + A4249_RS13060 0.85 +1.3
2,626,805 + A4249_RS13060 0.85 -0.0
2,626,805 + A4249_RS13060 0.85 +0.1
2,626,805 + A4249_RS13060 0.85 +0.1
2,626,805 + A4249_RS13060 0.85 +0.3
2,626,805 + A4249_RS13060 0.85 -0.5
2,626,806 - A4249_RS13060 0.85 -0.5
2,626,806 - A4249_RS13060 0.85 -1.0
2,626,887 + A4249_RS13060 0.89 +1.3
2,626,888 - A4249_RS13060 0.89 -0.0
2,626,888 - A4249_RS13060 0.89 +1.2
2,626,888 - A4249_RS13060 0.89 +0.3
2,626,889 + A4249_RS13060 0.89 -0.5
2,626,889 + A4249_RS13060 0.89 -2.5
2,626,889 + A4249_RS13060 0.89 +1.4
2,626,890 - A4249_RS13060 0.89 +2.1
2,626,901 + A4249_RS13060 0.89 +0.5
2,626,901 + A4249_RS13060 0.89 -0.1
2,626,914 + A4249_RS13060 0.90 -0.1
2,626,914 + A4249_RS13060 0.90 -0.6
2,626,914 + A4249_RS13060 0.90 +0.1
2,626,969 + -0.8
2,626,970 - +1.9
2,627,053 + +0.2
2,627,053 + -0.6
2,627,053 + +1.6
2,627,053 + +0.1
2,627,054 - +1.9
2,627,054 - +0.4
2,627,054 - +0.1
2,627,071 + +0.2
2,627,072 - +0.1
2,627,112 + -0.2
2,627,113 - -0.5
2,627,114 + -0.1
2,627,114 + +0.5
2,627,114 + -0.3
2,627,114 + +0.5
2,627,114 + -0.5
2,627,114 + +0.3
2,627,114 + -0.1
2,627,114 + -0.1
2,627,114 + -0.3
2,627,115 - -0.5
2,627,115 - +0.6
2,627,115 - +0.7
2,627,115 - +1.3
2,627,115 - +1.7
2,627,115 - +0.1
2,627,115 - +1.0
2,627,115 - +0.4
2,627,135 + +0.3
2,627,135 + -1.1
2,627,136 - +0.7
2,627,136 - +3.3
2,627,137 + +0.6
2,627,137 + +0.7
2,627,138 - +0.2
2,627,138 - -0.2
2,627,187 + -3.0
2,627,187 + -0.2
2,627,187 + -1.1
2,627,202 + +1.3
2,627,202 + +0.6
2,627,202 + -0.5
2,628,350 + -1.5
2,628,350 + +0.4
2,628,350 + +0.0
2,628,350 + +0.6
2,628,350 + +0.4
2,628,350 + -0.7
2,628,351 - +0.5
2,628,351 - -0.5
2,628,389 + -1.0
2,628,390 - +1.3
2,628,399 + -0.8
2,628,399 + +0.3
2,628,400 - +0.3
2,628,441 + +0.3
2,628,442 - +0.1
2,628,442 - -0.8
2,628,516 + A4249_RS13070 0.11 +0.4
2,628,516 + A4249_RS13070 0.11 +0.1
2,628,516 + A4249_RS13070 0.11 +1.0
2,628,516 + A4249_RS13070 0.11 -1.7
2,628,516 + A4249_RS13070 0.11 -0.1
2,628,516 + A4249_RS13070 0.11 -0.5
2,628,516 + A4249_RS13070 0.11 -0.9
2,628,516 + A4249_RS13070 0.11 +0.5
2,628,516 + A4249_RS13070 0.11 +0.3
2,628,516 + A4249_RS13070 0.11 +0.6
2,628,516 + A4249_RS13070 0.11 +0.2
2,628,516 + A4249_RS13070 0.11 -0.5
2,628,516 + A4249_RS13070 0.11 +0.4
2,628,517 - A4249_RS13070 0.11 +0.0
2,628,517 - A4249_RS13070 0.11 +1.7
2,628,517 - A4249_RS13070 0.11 -0.2
2,628,517 - A4249_RS13070 0.11 +0.1
2,628,517 - A4249_RS13070 0.11 +0.2
2,628,517 - A4249_RS13070 0.11 -0.5
2,628,517 - A4249_RS13070 0.11 +0.4
2,628,517 - A4249_RS13070 0.11 -0.5
2,628,517 - A4249_RS13070 0.11 -1.2
2,628,518 + A4249_RS13070 0.11 -0.1
2,628,573 + A4249_RS13070 0.14 +1.2
2,628,575 + A4249_RS13070 0.15 +0.9
2,628,576 - A4249_RS13070 0.15 -0.8
2,628,576 - A4249_RS13070 0.15 +0.5
2,628,576 - A4249_RS13070 0.15 +0.2
2,628,576 - A4249_RS13070 0.15 -0.5
2,628,576 - A4249_RS13070 0.15 +2.9
2,628,666 + A4249_RS13070 0.21 +0.5
2,628,666 + A4249_RS13070 0.21 +0.1
2,628,879 + A4249_RS13070 0.35 -0.4
2,628,879 + A4249_RS13070 0.35 +0.1
2,628,879 + A4249_RS13070 0.35 -1.4
2,628,879 + A4249_RS13070 0.35 -0.1
2,628,879 + A4249_RS13070 0.35 -1.0
2,628,879 + A4249_RS13070 0.35 -0.7
2,628,879 + A4249_RS13070 0.35 +0.1
2,628,879 + A4249_RS13070 0.35 +0.3
2,628,879 + A4249_RS13070 0.35 -0.1
2,628,880 - A4249_RS13070 0.35 +0.7
2,628,880 - A4249_RS13070 0.35 +1.2
2,628,880 - A4249_RS13070 0.35 +0.7
2,628,880 - A4249_RS13070 0.35 -1.3
2,628,880 - A4249_RS13070 0.35 -0.8
2,628,880 - A4249_RS13070 0.35 -0.4
2,628,880 - A4249_RS13070 0.35 -0.9
2,629,026 + A4249_RS13070 0.45 +0.5
2,629,026 + A4249_RS13070 0.45 +0.5
2,629,027 - A4249_RS13070 0.45 -0.8
2,629,027 - A4249_RS13070 0.45 +0.7
2,629,041 + A4249_RS13070 0.46 -0.8
2,629,041 + A4249_RS13070 0.46 -0.5
2,629,041 + A4249_RS13070 0.46 -0.3
2,629,042 - A4249_RS13070 0.46 +0.1
2,629,272 + A4249_RS13070 0.61 -0.4
2,629,273 - A4249_RS13070 0.61 +2.4
2,629,273 - A4249_RS13070 0.61 -2.4
2,629,273 - A4249_RS13070 0.61 -1.0
2,629,317 + A4249_RS13070 0.64 +0.1
2,629,317 + A4249_RS13070 0.64 +1.2
2,629,317 + A4249_RS13070 0.64 -0.3
2,629,317 + A4249_RS13070 0.64 -2.1
2,629,317 + A4249_RS13070 0.64 -0.5

Or see this region's nucleotide sequence