Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03450 and A4249_RS03455 are separated by 3 nucleotides A4249_RS03455 and A4249_RS03460 overlap by 4 nucleotides A4249_RS03460 and A4249_RS03465 overlap by 14 nucleotides A4249_RS03465 and A4249_RS03470 are separated by 141 nucleotides A4249_RS03470 and A4249_RS03475 overlap by 14 nucleotides
A4249_RS03450: A4249_RS03450 - ferritin-like domain-containing protein, at 720,318 to 720,818
_RS03450
A4249_RS03455: A4249_RS03455 - cysteine hydrolase, at 720,822 to 721,424
_RS03455
A4249_RS03460: A4249_RS03460 - glycoside hydrolase family 65 protein, at 721,421 to 723,493
_RS03460
A4249_RS03465: A4249_RS03465 - hypothetical protein, at 723,480 to 723,887
_RS03465
A4249_RS03470: A4249_RS03470 - hypothetical protein, at 724,029 to 724,214
_RS03470
A4249_RS03475: A4249_RS03475 - glutathione-dependent formaldehyde dehydrogenase, at 724,201 to 725,376
_RS03475
Position (kb) 721
722
723
724 Strain fitness (log2 ratio) -2
-1
0
1
2 at 720.588 kb on + strand, within A4249_RS03450 at 720.588 kb on + strand, within A4249_RS03450 at 720.588 kb on + strand, within A4249_RS03450 at 720.589 kb on - strand, within A4249_RS03450 at 720.589 kb on - strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.664 kb on - strand, within A4249_RS03450 at 720.664 kb on - strand, within A4249_RS03450 at 720.699 kb on + strand, within A4249_RS03450 at 720.934 kb on + strand, within A4249_RS03455 at 720.934 kb on + strand, within A4249_RS03455 at 721.041 kb on + strand, within A4249_RS03455 at 721.155 kb on + strand, within A4249_RS03455 at 721.155 kb on + strand, within A4249_RS03455 at 721.156 kb on - strand, within A4249_RS03455 at 721.284 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.356 kb on + strand, within A4249_RS03455 at 721.356 kb on + strand, within A4249_RS03455 at 721.357 kb on - strand, within A4249_RS03455 at 721.422 kb on + strand at 721.422 kb on + strand at 721.422 kb on + strand at 721.423 kb on - strand at 721.423 kb on - strand at 721.423 kb on - strand at 721.671 kb on + strand, within A4249_RS03460 at 721.705 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.806 kb on + strand, within A4249_RS03460 at 721.827 kb on + strand, within A4249_RS03460 at 721.827 kb on + strand, within A4249_RS03460 at 721.828 kb on - strand, within A4249_RS03460 at 721.828 kb on - strand, within A4249_RS03460 at 721.875 kb on + strand, within A4249_RS03460 at 721.876 kb on - strand, within A4249_RS03460 at 721.876 kb on - strand, within A4249_RS03460 at 722.251 kb on - strand, within A4249_RS03460 at 722.517 kb on + strand, within A4249_RS03460 at 722.517 kb on + strand, within A4249_RS03460 at 722.517 kb on + strand, within A4249_RS03460 at 722.517 kb on + strand, within A4249_RS03460 at 722.518 kb on - strand, within A4249_RS03460 at 722.520 kb on + strand, within A4249_RS03460 at 722.521 kb on - strand, within A4249_RS03460 at 722.521 kb on - strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.526 kb on + strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.527 kb on - strand, within A4249_RS03460 at 722.598 kb on + strand, within A4249_RS03460 at 722.598 kb on + strand, within A4249_RS03460 at 722.598 kb on + strand, within A4249_RS03460 at 722.599 kb on - strand, within A4249_RS03460 at 722.599 kb on - strand, within A4249_RS03460 at 722.831 kb on + strand, within A4249_RS03460 at 722.831 kb on + strand, within A4249_RS03460 at 722.832 kb on - strand, within A4249_RS03460 at 722.838 kb on + strand, within A4249_RS03460 at 722.838 kb on + strand, within A4249_RS03460 at 722.839 kb on - strand, within A4249_RS03460 at 723.027 kb on - strand, within A4249_RS03460 at 723.027 kb on - strand, within A4249_RS03460 at 723.210 kb on + strand, within A4249_RS03460 at 723.210 kb on + strand, within A4249_RS03460 at 723.210 kb on + strand, within A4249_RS03460 at 723.211 kb on - strand, within A4249_RS03460 at 723.211 kb on - strand, within A4249_RS03460 at 723.211 kb on - strand, within A4249_RS03460 at 723.211 kb on - strand, within A4249_RS03460 at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.417 kb on + strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.418 kb on - strand at 723.494 kb on - strand at 723.658 kb on + strand, within A4249_RS03465 at 723.658 kb on + strand, within A4249_RS03465 at 723.659 kb on - strand, within A4249_RS03465 at 723.659 kb on - strand, within A4249_RS03465 at 723.659 kb on - strand, within A4249_RS03465 at 723.659 kb on - strand, within A4249_RS03465 at 723.667 kb on + strand, within A4249_RS03465 at 723.667 kb on + strand, within A4249_RS03465 at 723.667 kb on + strand, within A4249_RS03465 at 723.668 kb on - strand, within A4249_RS03465 at 723.668 kb on - strand, within A4249_RS03465 at 723.668 kb on - strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.751 kb on + strand, within A4249_RS03465 at 723.752 kb on - strand, within A4249_RS03465 at 723.752 kb on - strand, within A4249_RS03465 at 723.752 kb on - strand, within A4249_RS03465 at 723.752 kb on - strand, within A4249_RS03465 at 723.752 kb on - strand, within A4249_RS03465 at 723.805 kb on + strand, within A4249_RS03465 at 723.805 kb on + strand, within A4249_RS03465 at 723.805 kb on + strand, within A4249_RS03465 at 723.805 kb on + strand, within A4249_RS03465 at 723.868 kb on + strand at 723.868 kb on + strand at 723.868 kb on + strand at 723.869 kb on - strand at 723.875 kb on - strand at 723.875 kb on - strand at 724.007 kb on + strand at 724.007 kb on + strand at 724.007 kb on + strand at 724.008 kb on - strand at 724.008 kb on - strand at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.113 kb on + strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.114 kb on - strand, within A4249_RS03470 at 724.259 kb on + strand at 724.259 kb on + strand at 724.259 kb on + strand at 724.259 kb on + strand at 724.260 kb on - strand at 724.260 kb on - strand at 724.260 kb on - strand at 724.260 kb on - strand at 724.355 kb on + strand, within A4249_RS03475 at 724.356 kb on - strand, within A4249_RS03475 at 724.442 kb on + strand, within A4249_RS03475 at 724.442 kb on + strand, within A4249_RS03475 at 724.443 kb on - strand, within A4249_RS03475 at 724.443 kb on - strand, within A4249_RS03475 at 724.443 kb on - strand, within A4249_RS03475 at 724.443 kb on - strand, within A4249_RS03475 at 724.464 kb on + strand, within A4249_RS03475 at 724.464 kb on + strand, within A4249_RS03475 at 724.464 kb on + strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475 at 724.465 kb on - strand, within A4249_RS03475
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 720,588 + A4249_RS03450 0.54 -2.2 720,588 + A4249_RS03450 0.54 +0.3 720,588 + A4249_RS03450 0.54 -0.2 720,589 - A4249_RS03450 0.54 +0.9 720,589 - A4249_RS03450 0.54 +0.9 720,648 + A4249_RS03450 0.66 +0.7 720,648 + A4249_RS03450 0.66 -1.2 720,648 + A4249_RS03450 0.66 +0.5 720,648 + A4249_RS03450 0.66 +0.5 720,648 + A4249_RS03450 0.66 +0.9 720,649 - A4249_RS03450 0.66 -0.7 720,649 - A4249_RS03450 0.66 +0.0 720,649 - A4249_RS03450 0.66 +0.3 720,649 - A4249_RS03450 0.66 -0.6 720,649 - A4249_RS03450 0.66 -0.2 720,649 - A4249_RS03450 0.66 +2.1 720,649 - A4249_RS03450 0.66 -0.4 720,649 - A4249_RS03450 0.66 +0.2 720,664 - A4249_RS03450 0.69 +0.7 720,664 - A4249_RS03450 0.69 -0.3 720,699 + A4249_RS03450 0.76 +0.5 720,934 + A4249_RS03455 0.19 -0.7 720,934 + A4249_RS03455 0.19 -0.2 721,041 + A4249_RS03455 0.36 -0.5 721,155 + A4249_RS03455 0.55 -0.7 721,155 + A4249_RS03455 0.55 -1.1 721,156 - A4249_RS03455 0.55 -0.6 721,284 + A4249_RS03455 0.77 -0.1 721,312 + A4249_RS03455 0.81 -0.6 721,312 + A4249_RS03455 0.81 -0.6 721,312 + A4249_RS03455 0.81 -0.5 721,356 + A4249_RS03455 0.89 +0.4 721,356 + A4249_RS03455 0.89 -0.3 721,357 - A4249_RS03455 0.89 -1.0 721,422 + -0.6 721,422 + -0.5 721,422 + +0.2 721,423 - +0.7 721,423 - +1.2 721,423 - -0.2 721,671 + A4249_RS03460 0.12 -1.0 721,705 - A4249_RS03460 0.14 -1.3 721,777 - A4249_RS03460 0.17 +0.6 721,777 - A4249_RS03460 0.17 +0.0 721,777 - A4249_RS03460 0.17 -1.0 721,806 + A4249_RS03460 0.19 +0.3 721,827 + A4249_RS03460 0.20 +0.2 721,827 + A4249_RS03460 0.20 +0.4 721,828 - A4249_RS03460 0.20 +0.4 721,828 - A4249_RS03460 0.20 +0.8 721,875 + A4249_RS03460 0.22 +0.9 721,876 - A4249_RS03460 0.22 -0.5 721,876 - A4249_RS03460 0.22 +0.2 722,251 - A4249_RS03460 0.40 -0.0 722,517 + A4249_RS03460 0.53 -0.0 722,517 + A4249_RS03460 0.53 -0.5 722,517 + A4249_RS03460 0.53 -0.2 722,517 + A4249_RS03460 0.53 -0.3 722,518 - A4249_RS03460 0.53 +0.2 722,520 + A4249_RS03460 0.53 +0.4 722,521 - A4249_RS03460 0.53 -0.1 722,521 - A4249_RS03460 0.53 +0.4 722,526 + A4249_RS03460 0.53 -0.7 722,526 + A4249_RS03460 0.53 +0.1 722,526 + A4249_RS03460 0.53 -0.1 722,526 + A4249_RS03460 0.53 -0.2 722,526 + A4249_RS03460 0.53 +1.1 722,526 + A4249_RS03460 0.53 -0.2 722,526 + A4249_RS03460 0.53 +0.8 722,526 + A4249_RS03460 0.53 +1.5 722,526 + A4249_RS03460 0.53 +1.0 722,527 - A4249_RS03460 0.53 -0.0 722,527 - A4249_RS03460 0.53 -0.2 722,527 - A4249_RS03460 0.53 +0.0 722,527 - A4249_RS03460 0.53 +0.4 722,527 - A4249_RS03460 0.53 +0.4 722,527 - A4249_RS03460 0.53 -0.2 722,527 - A4249_RS03460 0.53 -1.4 722,527 - A4249_RS03460 0.53 -2.0 722,527 - A4249_RS03460 0.53 -0.7 722,527 - A4249_RS03460 0.53 -1.3 722,527 - A4249_RS03460 0.53 +1.0 722,527 - A4249_RS03460 0.53 +0.5 722,527 - A4249_RS03460 0.53 -0.2 722,598 + A4249_RS03460 0.57 +0.2 722,598 + A4249_RS03460 0.57 -0.3 722,598 + A4249_RS03460 0.57 -0.2 722,599 - A4249_RS03460 0.57 +0.5 722,599 - A4249_RS03460 0.57 -0.5 722,831 + A4249_RS03460 0.68 -0.6 722,831 + A4249_RS03460 0.68 +0.1 722,832 - A4249_RS03460 0.68 -1.3 722,838 + A4249_RS03460 0.68 +0.4 722,838 + A4249_RS03460 0.68 +0.7 722,839 - A4249_RS03460 0.68 +0.7 723,027 - A4249_RS03460 0.77 +1.2 723,027 - A4249_RS03460 0.77 -0.3 723,210 + A4249_RS03460 0.86 -0.8 723,210 + A4249_RS03460 0.86 +1.1 723,210 + A4249_RS03460 0.86 -0.3 723,211 - A4249_RS03460 0.86 -0.3 723,211 - A4249_RS03460 0.86 +1.0 723,211 - A4249_RS03460 0.86 +0.1 723,211 - A4249_RS03460 0.86 -1.3 723,417 + -1.0 723,417 + +0.2 723,417 + +0.7 723,417 + -0.6 723,417 + -0.8 723,417 + -1.2 723,417 + -0.4 723,417 + -0.7 723,417 + +0.2 723,417 + -0.6 723,417 + -0.5 723,417 + +1.0 723,417 + +0.7 723,418 - +1.1 723,418 - +0.4 723,418 - -0.0 723,418 - -0.1 723,418 - +0.1 723,418 - +0.1 723,418 - +1.0 723,418 - -2.0 723,494 - +0.9 723,658 + A4249_RS03465 0.44 -1.1 723,658 + A4249_RS03465 0.44 +0.6 723,659 - A4249_RS03465 0.44 -0.3 723,659 - A4249_RS03465 0.44 +1.6 723,659 - A4249_RS03465 0.44 -0.8 723,659 - A4249_RS03465 0.44 +0.8 723,667 + A4249_RS03465 0.46 +0.3 723,667 + A4249_RS03465 0.46 -0.6 723,667 + A4249_RS03465 0.46 +0.2 723,668 - A4249_RS03465 0.46 +0.1 723,668 - A4249_RS03465 0.46 -0.8 723,668 - A4249_RS03465 0.46 +0.2 723,751 + A4249_RS03465 0.66 +0.2 723,751 + A4249_RS03465 0.66 +0.1 723,751 + A4249_RS03465 0.66 +0.5 723,751 + A4249_RS03465 0.66 -0.7 723,751 + A4249_RS03465 0.66 +1.2 723,751 + A4249_RS03465 0.66 -0.2 723,752 - A4249_RS03465 0.67 -0.2 723,752 - A4249_RS03465 0.67 -0.2 723,752 - A4249_RS03465 0.67 -0.6 723,752 - A4249_RS03465 0.67 +2.2 723,752 - A4249_RS03465 0.67 +0.9 723,805 + A4249_RS03465 0.80 -0.6 723,805 + A4249_RS03465 0.80 -0.2 723,805 + A4249_RS03465 0.80 +0.1 723,805 + A4249_RS03465 0.80 -0.8 723,868 + -0.0 723,868 + -0.3 723,868 + -0.6 723,869 - +0.8 723,875 - -0.9 723,875 - -0.0 724,007 + +0.5 724,007 + -2.4 724,007 + +0.1 724,008 - -1.3 724,008 - +0.2 724,113 + A4249_RS03470 0.45 +0.2 724,113 + A4249_RS03470 0.45 -1.0 724,113 + A4249_RS03470 0.45 +0.8 724,113 + A4249_RS03470 0.45 -0.0 724,113 + A4249_RS03470 0.45 -2.2 724,113 + A4249_RS03470 0.45 -0.7 724,113 + A4249_RS03470 0.45 -0.6 724,113 + A4249_RS03470 0.45 +0.2 724,113 + A4249_RS03470 0.45 -0.4 724,114 - A4249_RS03470 0.46 -0.2 724,114 - A4249_RS03470 0.46 -1.0 724,114 - A4249_RS03470 0.46 +0.3 724,114 - A4249_RS03470 0.46 -1.6 724,114 - A4249_RS03470 0.46 -0.6 724,114 - A4249_RS03470 0.46 -0.1 724,114 - A4249_RS03470 0.46 -0.3 724,114 - A4249_RS03470 0.46 -0.3 724,114 - A4249_RS03470 0.46 +0.3 724,114 - A4249_RS03470 0.46 -0.4 724,259 + -0.4 724,259 + -1.1 724,259 + -0.8 724,259 + -0.1 724,260 - -1.1 724,260 - -0.0 724,260 - -0.2 724,260 - -0.8 724,355 + A4249_RS03475 0.13 +0.2 724,356 - A4249_RS03475 0.13 -0.3 724,442 + A4249_RS03475 0.20 -0.8 724,442 + A4249_RS03475 0.20 +0.8 724,443 - A4249_RS03475 0.21 +1.2 724,443 - A4249_RS03475 0.21 -0.4 724,443 - A4249_RS03475 0.21 +0.2 724,443 - A4249_RS03475 0.21 -0.6 724,464 + A4249_RS03475 0.22 -1.0 724,464 + A4249_RS03475 0.22 +0.2 724,464 + A4249_RS03475 0.22 -0.2 724,465 - A4249_RS03475 0.22 -0.3 724,465 - A4249_RS03475 0.22 +0.7 724,465 - A4249_RS03475 0.22 -1.3 724,465 - A4249_RS03475 0.22 +0.1 724,465 - A4249_RS03475 0.22 -0.9 724,465 - A4249_RS03475 0.22 +0.8
Or see this region's nucleotide sequence