Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03090

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03085 and A4249_RS03090 are separated by 228 nucleotidesA4249_RS03090 and A4249_RS03095 are separated by 171 nucleotides A4249_RS03085: A4249_RS03085 - Fic family protein, at 650,905 to 652,014 _RS03085 A4249_RS03090: A4249_RS03090 - cytochrome c/FTR1 family iron permease, at 652,243 to 654,174 _RS03090 A4249_RS03095: A4249_RS03095 - dihydrolipoyl dehydrogenase, at 654,346 to 655,746 _RS03095 Position (kb) 652 653 654 655Strain fitness (log2 ratio) -2 -1 0 1 2at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.266 kb on + strand, within A4249_RS03085at 651.267 kb on - strand, within A4249_RS03085at 651.267 kb on - strand, within A4249_RS03085at 651.267 kb on - strand, within A4249_RS03085at 651.267 kb on - strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.269 kb on + strand, within A4249_RS03085at 651.270 kb on - strand, within A4249_RS03085at 651.270 kb on - strand, within A4249_RS03085at 651.270 kb on - strand, within A4249_RS03085at 651.308 kb on + strand, within A4249_RS03085at 651.308 kb on + strand, within A4249_RS03085at 651.308 kb on + strand, within A4249_RS03085at 651.308 kb on + strand, within A4249_RS03085at 651.308 kb on + strand, within A4249_RS03085at 651.309 kb on - strand, within A4249_RS03085at 651.309 kb on - strand, within A4249_RS03085at 651.309 kb on - strand, within A4249_RS03085at 651.519 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.521 kb on + strand, within A4249_RS03085at 651.522 kb on - strand, within A4249_RS03085at 651.522 kb on - strand, within A4249_RS03085at 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.004 kb on + strandat 652.005 kb on - strandat 652.005 kb on - strandat 652.005 kb on - strandat 652.005 kb on - strandat 652.005 kb on - strandat 652.005 kb on - strandat 652.037 kb on + strandat 652.046 kb on + strandat 652.092 kb on + strandat 652.102 kb on - strandat 652.178 kb on + strandat 652.347 kb on - strandat 652.511 kb on + strand, within A4249_RS03090at 652.512 kb on - strand, within A4249_RS03090at 652.558 kb on - strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.610 kb on + strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.611 kb on - strand, within A4249_RS03090at 652.641 kb on - strand, within A4249_RS03090at 652.716 kb on + strand, within A4249_RS03090at 652.717 kb on - strand, within A4249_RS03090at 652.717 kb on - strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.718 kb on + strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.719 kb on - strand, within A4249_RS03090at 652.910 kb on + strand, within A4249_RS03090at 652.910 kb on + strand, within A4249_RS03090at 652.910 kb on + strand, within A4249_RS03090at 652.911 kb on - strand, within A4249_RS03090at 652.911 kb on - strand, within A4249_RS03090at 652.911 kb on - strand, within A4249_RS03090at 652.911 kb on - strand, within A4249_RS03090at 652.911 kb on - strand, within A4249_RS03090at 653.231 kb on + strand, within A4249_RS03090at 653.369 kb on + strand, within A4249_RS03090at 653.370 kb on - strand, within A4249_RS03090at 653.370 kb on - strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.540 kb on + strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.541 kb on - strand, within A4249_RS03090at 653.627 kb on + strand, within A4249_RS03090at 653.627 kb on + strand, within A4249_RS03090at 653.628 kb on - strand, within A4249_RS03090at 653.628 kb on - strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.759 kb on + strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.760 kb on - strand, within A4249_RS03090at 653.816 kb on + strand, within A4249_RS03090at 653.999 kb on + strandat 654.000 kb on - strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.059 kb on + strandat 654.060 kb on - strandat 654.060 kb on - strandat 654.060 kb on - strandat 654.233 kb on + strandat 654.257 kb on - strandat 654.274 kb on + strandat 654.275 kb on - strandat 654.348 kb on - strandat 654.626 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.692 kb on + strand, within A4249_RS03095at 654.693 kb on - strand, within A4249_RS03095at 654.693 kb on - strand, within A4249_RS03095at 654.716 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.821 kb on + strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.822 kb on - strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.864 kb on + strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.865 kb on - strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.866 kb on + strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095at 654.867 kb on - strand, within A4249_RS03095

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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651,266 + A4249_RS03085 0.33 -0.4
651,266 + A4249_RS03085 0.33 +1.0
651,266 + A4249_RS03085 0.33 +0.6
651,266 + A4249_RS03085 0.33 -1.5
651,266 + A4249_RS03085 0.33 +0.4
651,266 + A4249_RS03085 0.33 -1.0
651,266 + A4249_RS03085 0.33 -0.6
651,267 - A4249_RS03085 0.33 -0.2
651,267 - A4249_RS03085 0.33 +0.7
651,267 - A4249_RS03085 0.33 +1.1
651,267 - A4249_RS03085 0.33 -1.6
651,269 + A4249_RS03085 0.33 -0.6
651,269 + A4249_RS03085 0.33 -0.8
651,269 + A4249_RS03085 0.33 -0.5
651,269 + A4249_RS03085 0.33 -0.0
651,269 + A4249_RS03085 0.33 -0.4
651,269 + A4249_RS03085 0.33 -0.2
651,269 + A4249_RS03085 0.33 +0.1
651,270 - A4249_RS03085 0.33 -0.1
651,270 - A4249_RS03085 0.33 +1.3
651,270 - A4249_RS03085 0.33 -0.5
651,308 + A4249_RS03085 0.36 -0.0
651,308 + A4249_RS03085 0.36 +1.0
651,308 + A4249_RS03085 0.36 -0.4
651,308 + A4249_RS03085 0.36 +0.7
651,308 + A4249_RS03085 0.36 -0.5
651,309 - A4249_RS03085 0.36 -0.6
651,309 - A4249_RS03085 0.36 -0.1
651,309 - A4249_RS03085 0.36 -0.2
651,519 + A4249_RS03085 0.55 +0.0
651,521 + A4249_RS03085 0.55 -0.5
651,521 + A4249_RS03085 0.55 -1.2
651,521 + A4249_RS03085 0.55 -0.4
651,521 + A4249_RS03085 0.55 -0.5
651,521 + A4249_RS03085 0.55 -0.6
651,521 + A4249_RS03085 0.55 -0.2
651,522 - A4249_RS03085 0.56 -1.6
651,522 - A4249_RS03085 0.56 +0.8
652,004 + +0.6
652,004 + +1.3
652,004 + -0.5
652,004 + +0.4
652,004 + -0.6
652,004 + +0.7
652,004 + -0.2
652,004 + +0.8
652,004 + +0.7
652,004 + -0.0
652,004 + +0.8
652,004 + -0.1
652,004 + +0.1
652,004 + -0.3
652,004 + +0.1
652,004 + -0.1
652,004 + -0.1
652,005 - +0.8
652,005 - +0.1
652,005 - -0.7
652,005 - -1.2
652,005 - +0.0
652,005 - +0.3
652,037 + -1.2
652,046 + -0.2
652,092 + -1.1
652,102 - +1.3
652,178 + -0.5
652,347 - +0.0
652,511 + A4249_RS03090 0.14 +0.2
652,512 - A4249_RS03090 0.14 -0.1
652,558 - A4249_RS03090 0.16 -0.9
652,610 + A4249_RS03090 0.19 +0.6
652,610 + A4249_RS03090 0.19 +0.0
652,610 + A4249_RS03090 0.19 -0.1
652,610 + A4249_RS03090 0.19 -0.4
652,610 + A4249_RS03090 0.19 -0.7
652,610 + A4249_RS03090 0.19 -1.2
652,611 - A4249_RS03090 0.19 +0.3
652,611 - A4249_RS03090 0.19 +0.1
652,611 - A4249_RS03090 0.19 +0.6
652,611 - A4249_RS03090 0.19 -1.1
652,611 - A4249_RS03090 0.19 -0.3
652,611 - A4249_RS03090 0.19 -0.8
652,641 - A4249_RS03090 0.21 -0.8
652,716 + A4249_RS03090 0.24 +0.2
652,717 - A4249_RS03090 0.25 +1.1
652,717 - A4249_RS03090 0.25 -0.4
652,718 + A4249_RS03090 0.25 +0.0
652,718 + A4249_RS03090 0.25 +1.4
652,718 + A4249_RS03090 0.25 -0.4
652,718 + A4249_RS03090 0.25 +0.7
652,718 + A4249_RS03090 0.25 -1.2
652,718 + A4249_RS03090 0.25 -0.2
652,718 + A4249_RS03090 0.25 -0.6
652,718 + A4249_RS03090 0.25 -0.6
652,718 + A4249_RS03090 0.25 +1.4
652,718 + A4249_RS03090 0.25 +0.6
652,718 + A4249_RS03090 0.25 +0.1
652,718 + A4249_RS03090 0.25 -0.1
652,718 + A4249_RS03090 0.25 -1.1
652,718 + A4249_RS03090 0.25 -0.8
652,718 + A4249_RS03090 0.25 -0.2
652,719 - A4249_RS03090 0.25 +0.3
652,719 - A4249_RS03090 0.25 -1.0
652,719 - A4249_RS03090 0.25 -1.3
652,719 - A4249_RS03090 0.25 +0.8
652,719 - A4249_RS03090 0.25 -1.2
652,719 - A4249_RS03090 0.25 +0.1
652,719 - A4249_RS03090 0.25 -0.7
652,719 - A4249_RS03090 0.25 +0.7
652,719 - A4249_RS03090 0.25 -0.1
652,719 - A4249_RS03090 0.25 -1.5
652,719 - A4249_RS03090 0.25 +1.3
652,719 - A4249_RS03090 0.25 -0.5
652,719 - A4249_RS03090 0.25 -1.0
652,910 + A4249_RS03090 0.35 +0.3
652,910 + A4249_RS03090 0.35 -0.9
652,910 + A4249_RS03090 0.35 +0.5
652,911 - A4249_RS03090 0.35 +1.8
652,911 - A4249_RS03090 0.35 -0.6
652,911 - A4249_RS03090 0.35 -0.7
652,911 - A4249_RS03090 0.35 -0.6
652,911 - A4249_RS03090 0.35 +0.7
653,231 + A4249_RS03090 0.51 +0.8
653,369 + A4249_RS03090 0.58 -0.4
653,370 - A4249_RS03090 0.58 -0.3
653,370 - A4249_RS03090 0.58 -0.3
653,540 + A4249_RS03090 0.67 -1.2
653,540 + A4249_RS03090 0.67 -0.0
653,540 + A4249_RS03090 0.67 -0.2
653,540 + A4249_RS03090 0.67 -1.2
653,540 + A4249_RS03090 0.67 -0.7
653,540 + A4249_RS03090 0.67 +0.5
653,540 + A4249_RS03090 0.67 +0.0
653,540 + A4249_RS03090 0.67 +0.2
653,540 + A4249_RS03090 0.67 -0.6
653,541 - A4249_RS03090 0.67 -0.4
653,541 - A4249_RS03090 0.67 -0.3
653,541 - A4249_RS03090 0.67 -0.8
653,541 - A4249_RS03090 0.67 -0.0
653,541 - A4249_RS03090 0.67 +0.0
653,541 - A4249_RS03090 0.67 -0.1
653,541 - A4249_RS03090 0.67 -0.7
653,541 - A4249_RS03090 0.67 +0.4
653,627 + A4249_RS03090 0.72 +0.6
653,627 + A4249_RS03090 0.72 -0.5
653,628 - A4249_RS03090 0.72 +0.0
653,628 - A4249_RS03090 0.72 -0.9
653,759 + A4249_RS03090 0.78 +0.4
653,759 + A4249_RS03090 0.78 -0.9
653,759 + A4249_RS03090 0.78 -0.4
653,759 + A4249_RS03090 0.78 +0.0
653,759 + A4249_RS03090 0.78 -1.0
653,760 - A4249_RS03090 0.79 -0.1
653,760 - A4249_RS03090 0.79 +0.8
653,760 - A4249_RS03090 0.79 +0.0
653,760 - A4249_RS03090 0.79 +0.1
653,760 - A4249_RS03090 0.79 -0.2
653,760 - A4249_RS03090 0.79 +0.2
653,760 - A4249_RS03090 0.79 +1.3
653,816 + A4249_RS03090 0.81 +0.2
653,999 + -0.3
654,000 - -0.9
654,059 + +0.8
654,059 + -0.3
654,059 + -0.1
654,059 + -0.6
654,060 - -0.4
654,060 - -0.5
654,060 - -2.2
654,233 + -1.5
654,257 - +0.8
654,274 + +0.4
654,275 - +0.1
654,348 - -0.1
654,626 + A4249_RS03095 0.20 +0.5
654,692 + A4249_RS03095 0.25 +1.8
654,692 + A4249_RS03095 0.25 -0.2
654,692 + A4249_RS03095 0.25 -1.0
654,692 + A4249_RS03095 0.25 -0.4
654,693 - A4249_RS03095 0.25 -1.0
654,693 - A4249_RS03095 0.25 -1.0
654,716 + A4249_RS03095 0.26 -0.2
654,821 + A4249_RS03095 0.34 -0.5
654,821 + A4249_RS03095 0.34 -0.6
654,821 + A4249_RS03095 0.34 +0.3
654,821 + A4249_RS03095 0.34 -0.5
654,821 + A4249_RS03095 0.34 -1.6
654,822 - A4249_RS03095 0.34 -0.4
654,822 - A4249_RS03095 0.34 -1.7
654,822 - A4249_RS03095 0.34 -0.7
654,822 - A4249_RS03095 0.34 -0.4
654,822 - A4249_RS03095 0.34 -0.9
654,864 + A4249_RS03095 0.37 -0.0
654,864 + A4249_RS03095 0.37 -0.7
654,864 + A4249_RS03095 0.37 -1.1
654,864 + A4249_RS03095 0.37 -0.4
654,864 + A4249_RS03095 0.37 +0.9
654,864 + A4249_RS03095 0.37 +0.7
654,865 - A4249_RS03095 0.37 +0.3
654,865 - A4249_RS03095 0.37 +0.0
654,865 - A4249_RS03095 0.37 +0.1
654,865 - A4249_RS03095 0.37 -0.1
654,865 - A4249_RS03095 0.37 -0.3
654,865 - A4249_RS03095 0.37 +0.8
654,865 - A4249_RS03095 0.37 -2.2
654,865 - A4249_RS03095 0.37 -0.8
654,866 + A4249_RS03095 0.37 -0.4
654,866 + A4249_RS03095 0.37 -1.7
654,866 + A4249_RS03095 0.37 -1.0
654,866 + A4249_RS03095 0.37 -0.3
654,866 + A4249_RS03095 0.37 -0.4
654,867 - A4249_RS03095 0.37 +0.1
654,867 - A4249_RS03095 0.37 -0.3
654,867 - A4249_RS03095 0.37 -1.3
654,867 - A4249_RS03095 0.37 -0.4
654,867 - A4249_RS03095 0.37 +1.0

Or see this region's nucleotide sequence