Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02645 and A4249_RS02650 are separated by 88 nucleotides A4249_RS02650 and A4249_RS02655 are separated by 5 nucleotides A4249_RS02655 and A4249_RS02660 are separated by 101 nucleotides
A4249_RS02645: A4249_RS02645 - cobalamin biosynthesis protein CbiG, at 566,368 to 567,285
_RS02645
A4249_RS02650: A4249_RS02650 - hypothetical protein, at 567,374 to 567,889
_RS02650
A4249_RS02655: A4249_RS02655 - exodeoxyribonuclease III, at 567,895 to 568,680
_RS02655
A4249_RS02660: A4249_RS02660 - hypothetical protein, at 568,782 to 569,771
_RS02660
Position (kb) 567
568 Strain fitness (log2 ratio) -1
0
1
2
3 at 566.777 kb on + strand, within A4249_RS02645 at 567.167 kb on + strand, within A4249_RS02645 at 567.168 kb on - strand, within A4249_RS02645 at 567.168 kb on - strand, within A4249_RS02645 at 567.261 kb on + strand at 567.261 kb on + strand at 567.262 kb on - strand at 567.263 kb on + strand at 567.263 kb on + strand at 567.263 kb on + strand at 567.263 kb on + strand at 567.263 kb on + strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.264 kb on - strand at 567.300 kb on + strand at 567.300 kb on + strand at 567.301 kb on - strand at 567.301 kb on - strand at 567.301 kb on - strand at 567.335 kb on - strand at 567.645 kb on + strand, within A4249_RS02650 at 567.645 kb on + strand, within A4249_RS02650 at 567.646 kb on - strand, within A4249_RS02650 at 567.646 kb on - strand, within A4249_RS02650 at 567.904 kb on + strand at 567.905 kb on - strand at 567.905 kb on - strand at 567.905 kb on - strand at 567.905 kb on - strand at 567.905 kb on - strand at 568.064 kb on + strand, within A4249_RS02655 at 568.065 kb on - strand, within A4249_RS02655 at 568.065 kb on - strand, within A4249_RS02655 at 568.065 kb on - strand, within A4249_RS02655 at 568.065 kb on - strand, within A4249_RS02655 at 568.079 kb on + strand, within A4249_RS02655 at 568.079 kb on + strand, within A4249_RS02655 at 568.079 kb on + strand, within A4249_RS02655 at 568.080 kb on - strand, within A4249_RS02655 at 568.080 kb on - strand, within A4249_RS02655 at 568.080 kb on - strand, within A4249_RS02655 at 568.080 kb on - strand, within A4249_RS02655 at 568.080 kb on - strand, within A4249_RS02655 at 568.232 kb on + strand, within A4249_RS02655 at 568.232 kb on + strand, within A4249_RS02655 at 568.232 kb on + strand, within A4249_RS02655 at 568.233 kb on - strand, within A4249_RS02655 at 568.233 kb on - strand, within A4249_RS02655 at 568.316 kb on + strand, within A4249_RS02655 at 568.316 kb on + strand, within A4249_RS02655 at 568.316 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.358 kb on + strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.359 kb on - strand, within A4249_RS02655 at 568.407 kb on + strand, within A4249_RS02655 at 568.407 kb on + strand, within A4249_RS02655 at 568.407 kb on + strand, within A4249_RS02655 at 568.407 kb on + strand, within A4249_RS02655 at 568.408 kb on - strand, within A4249_RS02655 at 568.409 kb on + strand, within A4249_RS02655 at 568.410 kb on - strand, within A4249_RS02655 at 568.410 kb on - strand, within A4249_RS02655 at 568.469 kb on + strand, within A4249_RS02655 at 568.469 kb on + strand, within A4249_RS02655 at 568.469 kb on + strand, within A4249_RS02655 at 568.470 kb on - strand, within A4249_RS02655 at 568.470 kb on - strand, within A4249_RS02655 at 568.470 kb on - strand, within A4249_RS02655 at 568.470 kb on - strand, within A4249_RS02655 at 568.496 kb on + strand, within A4249_RS02655 at 568.496 kb on + strand, within A4249_RS02655 at 568.496 kb on + strand, within A4249_RS02655 at 568.496 kb on + strand, within A4249_RS02655 at 568.497 kb on - strand, within A4249_RS02655 at 568.497 kb on - strand, within A4249_RS02655 at 568.497 kb on - strand, within A4249_RS02655 at 568.497 kb on - strand, within A4249_RS02655 at 568.526 kb on + strand, within A4249_RS02655 at 568.526 kb on + strand, within A4249_RS02655 at 568.526 kb on + strand, within A4249_RS02655 at 568.526 kb on + strand, within A4249_RS02655 at 568.527 kb on - strand, within A4249_RS02655 at 568.527 kb on - strand, within A4249_RS02655 at 568.692 kb on + strand at 568.693 kb on - strand at 568.783 kb on + strand at 568.784 kb on - strand at 568.784 kb on - strand at 568.784 kb on - strand at 568.784 kb on - strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand at 568.873 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 566,777 + A4249_RS02645 0.45 +1.2 567,167 + A4249_RS02645 0.87 -0.5 567,168 - A4249_RS02645 0.87 +1.3 567,168 - A4249_RS02645 0.87 +1.9 567,261 + +0.4 567,261 + +0.5 567,262 - -0.0 567,263 + +2.9 567,263 + +0.5 567,263 + +0.5 567,263 + +0.1 567,263 + +0.9 567,264 - -0.3 567,264 - -0.7 567,264 - -0.3 567,264 - -0.6 567,264 - -0.1 567,264 - +0.6 567,264 - +0.5 567,264 - -0.0 567,300 + -0.3 567,300 + +0.7 567,301 - -1.3 567,301 - +1.1 567,301 - -0.4 567,335 - -0.5 567,645 + A4249_RS02650 0.53 -1.4 567,645 + A4249_RS02650 0.53 +0.4 567,646 - A4249_RS02650 0.53 -1.1 567,646 - A4249_RS02650 0.53 -0.0 567,904 + +0.0 567,905 - +0.3 567,905 - -0.2 567,905 - +0.7 567,905 - +0.6 567,905 - +1.0 568,064 + A4249_RS02655 0.22 +1.4 568,065 - A4249_RS02655 0.22 +0.9 568,065 - A4249_RS02655 0.22 +1.3 568,065 - A4249_RS02655 0.22 +0.2 568,065 - A4249_RS02655 0.22 -0.7 568,079 + A4249_RS02655 0.23 +0.1 568,079 + A4249_RS02655 0.23 -0.5 568,079 + A4249_RS02655 0.23 +0.5 568,080 - A4249_RS02655 0.24 +1.2 568,080 - A4249_RS02655 0.24 +2.4 568,080 - A4249_RS02655 0.24 -0.7 568,080 - A4249_RS02655 0.24 +0.7 568,080 - A4249_RS02655 0.24 -0.3 568,232 + A4249_RS02655 0.43 -0.2 568,232 + A4249_RS02655 0.43 +1.9 568,232 + A4249_RS02655 0.43 +1.0 568,233 - A4249_RS02655 0.43 +1.3 568,233 - A4249_RS02655 0.43 +0.5 568,316 + A4249_RS02655 0.54 +0.1 568,316 + A4249_RS02655 0.54 -0.1 568,316 + A4249_RS02655 0.54 -0.0 568,358 + A4249_RS02655 0.59 +0.1 568,358 + A4249_RS02655 0.59 +1.1 568,358 + A4249_RS02655 0.59 +0.7 568,358 + A4249_RS02655 0.59 -0.3 568,358 + A4249_RS02655 0.59 +0.7 568,358 + A4249_RS02655 0.59 -0.6 568,358 + A4249_RS02655 0.59 +0.6 568,358 + A4249_RS02655 0.59 -0.5 568,358 + A4249_RS02655 0.59 -0.3 568,359 - A4249_RS02655 0.59 +1.3 568,359 - A4249_RS02655 0.59 +0.3 568,359 - A4249_RS02655 0.59 -1.1 568,359 - A4249_RS02655 0.59 +1.3 568,359 - A4249_RS02655 0.59 -0.2 568,359 - A4249_RS02655 0.59 -0.5 568,359 - A4249_RS02655 0.59 -0.1 568,359 - A4249_RS02655 0.59 +1.0 568,359 - A4249_RS02655 0.59 +0.1 568,359 - A4249_RS02655 0.59 -0.3 568,359 - A4249_RS02655 0.59 +0.3 568,407 + A4249_RS02655 0.65 -0.7 568,407 + A4249_RS02655 0.65 -0.0 568,407 + A4249_RS02655 0.65 -0.5 568,407 + A4249_RS02655 0.65 -0.7 568,408 - A4249_RS02655 0.65 -0.5 568,409 + A4249_RS02655 0.65 -0.1 568,410 - A4249_RS02655 0.66 +0.6 568,410 - A4249_RS02655 0.66 -0.6 568,469 + A4249_RS02655 0.73 -0.5 568,469 + A4249_RS02655 0.73 -0.9 568,469 + A4249_RS02655 0.73 +0.2 568,470 - A4249_RS02655 0.73 +1.4 568,470 - A4249_RS02655 0.73 -0.3 568,470 - A4249_RS02655 0.73 -0.1 568,470 - A4249_RS02655 0.73 -0.3 568,496 + A4249_RS02655 0.76 -0.8 568,496 + A4249_RS02655 0.76 -1.1 568,496 + A4249_RS02655 0.76 -0.3 568,496 + A4249_RS02655 0.76 -1.1 568,497 - A4249_RS02655 0.77 -0.0 568,497 - A4249_RS02655 0.77 +1.7 568,497 - A4249_RS02655 0.77 -0.4 568,497 - A4249_RS02655 0.77 +0.0 568,526 + A4249_RS02655 0.80 -0.9 568,526 + A4249_RS02655 0.80 -0.3 568,526 + A4249_RS02655 0.80 -1.4 568,526 + A4249_RS02655 0.80 -1.1 568,527 - A4249_RS02655 0.80 -0.2 568,527 - A4249_RS02655 0.80 -0.1 568,692 + -1.0 568,693 - +0.5 568,783 + -0.4 568,784 - -0.7 568,784 - -0.2 568,784 - -0.1 568,784 - +0.4 568,873 + -0.3 568,873 + -0.9 568,873 + +0.1 568,873 + +0.3 568,873 + -0.3 568,873 + +0.3 568,873 + -1.3 568,873 + -1.5
Or see this region's nucleotide sequence