Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02070

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02065 and A4249_RS02070 are separated by 79 nucleotidesA4249_RS02070 and A4249_RS02075 are separated by 3 nucleotidesA4249_RS02075 and A4249_RS02080 overlap by 4 nucleotides A4249_RS02065: A4249_RS02065 - sugar porter family MFS transporter, at 427,861 to 429,294 _RS02065 A4249_RS02070: A4249_RS02070 - aldehyde dehydrogenase family protein, at 429,374 to 430,816 _RS02070 A4249_RS02075: A4249_RS02075 - SMP-30/gluconolactonase/LRE family protein, at 430,820 to 431,674 _RS02075 A4249_RS02080: A4249_RS02080 - aldose 1-epimerase, at 431,671 to 432,534 _RS02080 Position (kb) 429 430 431Strain fitness (log2 ratio) -2 -1 0 1 2at 428.470 kb on + strand, within A4249_RS02065at 428.470 kb on + strand, within A4249_RS02065at 428.470 kb on + strand, within A4249_RS02065at 428.470 kb on + strand, within A4249_RS02065at 428.470 kb on + strand, within A4249_RS02065at 428.471 kb on - strand, within A4249_RS02065at 428.471 kb on - strand, within A4249_RS02065at 428.471 kb on - strand, within A4249_RS02065at 428.471 kb on - strand, within A4249_RS02065at 428.725 kb on - strand, within A4249_RS02065at 428.725 kb on - strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.740 kb on + strand, within A4249_RS02065at 428.741 kb on - strand, within A4249_RS02065at 428.741 kb on - strand, within A4249_RS02065at 428.741 kb on - strand, within A4249_RS02065at 428.741 kb on - strand, within A4249_RS02065at 428.741 kb on - strand, within A4249_RS02065at 428.744 kb on - strand, within A4249_RS02065at 428.744 kb on - strand, within A4249_RS02065at 428.744 kb on - strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.016 kb on + strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.017 kb on - strand, within A4249_RS02065at 429.196 kb on + strandat 429.196 kb on + strandat 429.197 kb on - strandat 429.197 kb on - strandat 429.205 kb on + strandat 429.205 kb on + strandat 429.205 kb on + strandat 429.205 kb on + strandat 429.205 kb on + strandat 429.206 kb on - strandat 429.206 kb on - strandat 429.206 kb on - strandat 429.221 kb on + strandat 429.357 kb on + strandat 429.357 kb on + strandat 429.357 kb on + strandat 429.358 kb on - strandat 429.358 kb on - strandat 429.710 kb on + strand, within A4249_RS02070at 429.710 kb on + strand, within A4249_RS02070at 429.710 kb on + strand, within A4249_RS02070at 429.785 kb on + strand, within A4249_RS02070at 429.785 kb on + strand, within A4249_RS02070at 429.785 kb on + strand, within A4249_RS02070at 429.786 kb on - strand, within A4249_RS02070at 429.786 kb on - strand, within A4249_RS02070at 429.786 kb on - strand, within A4249_RS02070at 429.786 kb on - strand, within A4249_RS02070at 429.786 kb on - strand, within A4249_RS02070at 429.979 kb on + strand, within A4249_RS02070at 429.979 kb on + strand, within A4249_RS02070at 429.979 kb on + strand, within A4249_RS02070at 429.979 kb on + strand, within A4249_RS02070at 429.979 kb on + strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 429.980 kb on - strand, within A4249_RS02070at 430.376 kb on + strand, within A4249_RS02070at 430.377 kb on - strand, within A4249_RS02070at 430.377 kb on - strand, within A4249_RS02070at 430.377 kb on - strand, within A4249_RS02070at 430.377 kb on - strand, within A4249_RS02070at 430.377 kb on - strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.382 kb on + strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.383 kb on - strand, within A4249_RS02070at 430.460 kb on + strand, within A4249_RS02070at 430.460 kb on + strand, within A4249_RS02070at 430.461 kb on - strand, within A4249_RS02070at 430.461 kb on - strand, within A4249_RS02070at 430.461 kb on - strand, within A4249_RS02070at 430.461 kb on - strand, within A4249_RS02070at 430.559 kb on + strand, within A4249_RS02070at 430.559 kb on + strand, within A4249_RS02070at 430.559 kb on + strand, within A4249_RS02070at 430.559 kb on + strand, within A4249_RS02070at 430.560 kb on - strand, within A4249_RS02070at 430.560 kb on - strand, within A4249_RS02070at 430.560 kb on - strand, within A4249_RS02070at 430.560 kb on - strand, within A4249_RS02070at 430.706 kb on + strandat 430.706 kb on + strandat 430.706 kb on + strandat 430.707 kb on - strandat 430.707 kb on - strandat 430.707 kb on - strandat 430.742 kb on + strandat 430.742 kb on + strandat 430.742 kb on + strandat 430.743 kb on - strandat 430.743 kb on - strandat 430.743 kb on - strandat 430.743 kb on - strandat 430.743 kb on - strandat 430.781 kb on + strandat 430.782 kb on - strandat 430.782 kb on - strandat 430.782 kb on - strandat 430.802 kb on + strandat 430.802 kb on + strandat 430.803 kb on - strandat 430.803 kb on - strandat 430.846 kb on + strandat 430.846 kb on + strandat 430.937 kb on + strand, within A4249_RS02075at 430.937 kb on + strand, within A4249_RS02075at 430.937 kb on + strand, within A4249_RS02075at 430.937 kb on + strand, within A4249_RS02075at 430.938 kb on - strand, within A4249_RS02075at 430.938 kb on - strand, within A4249_RS02075at 430.938 kb on - strand, within A4249_RS02075at 431.045 kb on + strand, within A4249_RS02075at 431.199 kb on + strand, within A4249_RS02075at 431.200 kb on - strand, within A4249_RS02075at 431.200 kb on - strand, within A4249_RS02075at 431.200 kb on - strand, within A4249_RS02075at 431.200 kb on - strand, within A4249_RS02075at 431.202 kb on - strand, within A4249_RS02075at 431.291 kb on + strand, within A4249_RS02075at 431.291 kb on + strand, within A4249_RS02075at 431.291 kb on + strand, within A4249_RS02075at 431.292 kb on - strand, within A4249_RS02075at 431.292 kb on - strand, within A4249_RS02075at 431.292 kb on - strand, within A4249_RS02075at 431.336 kb on + strand, within A4249_RS02075at 431.337 kb on - strand, within A4249_RS02075at 431.337 kb on - strand, within A4249_RS02075at 431.388 kb on - strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.555 kb on + strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.556 kb on - strand, within A4249_RS02075at 431.557 kb on + strand, within A4249_RS02075at 431.557 kb on + strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.558 kb on - strand, within A4249_RS02075at 431.559 kb on - strand, within A4249_RS02075at 431.622 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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428,470 + A4249_RS02065 0.42 +0.1
428,470 + A4249_RS02065 0.42 +1.1
428,470 + A4249_RS02065 0.42 -0.5
428,470 + A4249_RS02065 0.42 -1.5
428,470 + A4249_RS02065 0.42 -1.9
428,471 - A4249_RS02065 0.43 -0.7
428,471 - A4249_RS02065 0.43 -0.7
428,471 - A4249_RS02065 0.43 -1.4
428,471 - A4249_RS02065 0.43 -1.6
428,725 - A4249_RS02065 0.60 -1.5
428,725 - A4249_RS02065 0.60 -0.4
428,740 + A4249_RS02065 0.61 -0.3
428,740 + A4249_RS02065 0.61 +1.1
428,740 + A4249_RS02065 0.61 +0.3
428,740 + A4249_RS02065 0.61 +0.5
428,740 + A4249_RS02065 0.61 -0.3
428,740 + A4249_RS02065 0.61 -0.5
428,740 + A4249_RS02065 0.61 +0.8
428,740 + A4249_RS02065 0.61 -0.1
428,740 + A4249_RS02065 0.61 -0.9
428,740 + A4249_RS02065 0.61 -0.3
428,741 - A4249_RS02065 0.61 -0.7
428,741 - A4249_RS02065 0.61 +0.3
428,741 - A4249_RS02065 0.61 -1.2
428,741 - A4249_RS02065 0.61 -0.7
428,741 - A4249_RS02065 0.61 -0.5
428,744 - A4249_RS02065 0.62 +0.7
428,744 - A4249_RS02065 0.62 +0.2
428,744 - A4249_RS02065 0.62 -1.6
429,016 + A4249_RS02065 0.81 -0.1
429,016 + A4249_RS02065 0.81 -0.3
429,016 + A4249_RS02065 0.81 +0.8
429,016 + A4249_RS02065 0.81 -1.0
429,016 + A4249_RS02065 0.81 -0.5
429,016 + A4249_RS02065 0.81 -0.1
429,016 + A4249_RS02065 0.81 +0.7
429,016 + A4249_RS02065 0.81 +0.0
429,016 + A4249_RS02065 0.81 +0.4
429,016 + A4249_RS02065 0.81 -0.2
429,016 + A4249_RS02065 0.81 -0.1
429,017 - A4249_RS02065 0.81 -1.1
429,017 - A4249_RS02065 0.81 -1.6
429,017 - A4249_RS02065 0.81 -0.2
429,017 - A4249_RS02065 0.81 -0.1
429,017 - A4249_RS02065 0.81 -0.1
429,017 - A4249_RS02065 0.81 -1.3
429,017 - A4249_RS02065 0.81 +1.0
429,017 - A4249_RS02065 0.81 +0.8
429,017 - A4249_RS02065 0.81 +1.4
429,017 - A4249_RS02065 0.81 +1.5
429,017 - A4249_RS02065 0.81 -0.1
429,196 + +0.1
429,196 + -0.1
429,197 - +0.2
429,197 - -0.6
429,205 + +0.6
429,205 + +0.1
429,205 + +0.9
429,205 + -0.0
429,205 + -0.4
429,206 - -0.4
429,206 - +0.4
429,206 - +2.4
429,221 + -0.1
429,357 + +0.2
429,357 + -0.3
429,357 + +0.3
429,358 - -1.9
429,358 - -0.4
429,710 + A4249_RS02070 0.23 -1.2
429,710 + A4249_RS02070 0.23 +0.7
429,710 + A4249_RS02070 0.23 -0.6
429,785 + A4249_RS02070 0.28 -1.4
429,785 + A4249_RS02070 0.28 +0.1
429,785 + A4249_RS02070 0.28 -1.2
429,786 - A4249_RS02070 0.29 +0.9
429,786 - A4249_RS02070 0.29 -0.5
429,786 - A4249_RS02070 0.29 -0.1
429,786 - A4249_RS02070 0.29 -0.4
429,786 - A4249_RS02070 0.29 -0.4
429,979 + A4249_RS02070 0.42 -0.4
429,979 + A4249_RS02070 0.42 -1.0
429,979 + A4249_RS02070 0.42 +0.5
429,979 + A4249_RS02070 0.42 -1.2
429,979 + A4249_RS02070 0.42 -0.0
429,980 - A4249_RS02070 0.42 +0.7
429,980 - A4249_RS02070 0.42 +0.1
429,980 - A4249_RS02070 0.42 -0.2
429,980 - A4249_RS02070 0.42 -0.9
429,980 - A4249_RS02070 0.42 +0.6
429,980 - A4249_RS02070 0.42 +0.1
429,980 - A4249_RS02070 0.42 -0.7
429,980 - A4249_RS02070 0.42 +0.2
430,376 + A4249_RS02070 0.69 +0.6
430,377 - A4249_RS02070 0.70 +0.3
430,377 - A4249_RS02070 0.70 +0.8
430,377 - A4249_RS02070 0.70 -0.2
430,377 - A4249_RS02070 0.70 -0.2
430,377 - A4249_RS02070 0.70 -1.8
430,382 + A4249_RS02070 0.70 +0.2
430,382 + A4249_RS02070 0.70 +0.2
430,382 + A4249_RS02070 0.70 -0.3
430,382 + A4249_RS02070 0.70 -0.1
430,382 + A4249_RS02070 0.70 +0.7
430,382 + A4249_RS02070 0.70 -0.5
430,382 + A4249_RS02070 0.70 +1.1
430,382 + A4249_RS02070 0.70 +0.2
430,382 + A4249_RS02070 0.70 -0.4
430,382 + A4249_RS02070 0.70 +0.6
430,383 - A4249_RS02070 0.70 +0.1
430,383 - A4249_RS02070 0.70 +1.1
430,383 - A4249_RS02070 0.70 -0.2
430,383 - A4249_RS02070 0.70 -0.3
430,383 - A4249_RS02070 0.70 -0.8
430,383 - A4249_RS02070 0.70 -0.4
430,383 - A4249_RS02070 0.70 -0.3
430,383 - A4249_RS02070 0.70 +0.1
430,383 - A4249_RS02070 0.70 -0.7
430,383 - A4249_RS02070 0.70 +0.0
430,383 - A4249_RS02070 0.70 +0.6
430,383 - A4249_RS02070 0.70 -0.4
430,383 - A4249_RS02070 0.70 +2.0
430,460 + A4249_RS02070 0.75 -0.1
430,460 + A4249_RS02070 0.75 +0.1
430,461 - A4249_RS02070 0.75 +0.7
430,461 - A4249_RS02070 0.75 -0.1
430,461 - A4249_RS02070 0.75 -1.1
430,461 - A4249_RS02070 0.75 -0.5
430,559 + A4249_RS02070 0.82 +0.1
430,559 + A4249_RS02070 0.82 -0.6
430,559 + A4249_RS02070 0.82 -2.5
430,559 + A4249_RS02070 0.82 -0.9
430,560 - A4249_RS02070 0.82 +0.1
430,560 - A4249_RS02070 0.82 -0.9
430,560 - A4249_RS02070 0.82 -0.1
430,560 - A4249_RS02070 0.82 +1.3
430,706 + -1.0
430,706 + -0.1
430,706 + -1.1
430,707 - +0.7
430,707 - -0.6
430,707 - +1.0
430,742 + -1.5
430,742 + +0.7
430,742 + +1.4
430,743 - +0.2
430,743 - -1.1
430,743 - +1.5
430,743 - -0.8
430,743 - -0.8
430,781 + -0.7
430,782 - +0.2
430,782 - -0.4
430,782 - -0.8
430,802 + -0.4
430,802 + +0.8
430,803 - +0.9
430,803 - -0.1
430,846 + -1.0
430,846 + +0.6
430,937 + A4249_RS02075 0.14 +0.7
430,937 + A4249_RS02075 0.14 +1.6
430,937 + A4249_RS02075 0.14 -0.6
430,937 + A4249_RS02075 0.14 +0.5
430,938 - A4249_RS02075 0.14 +0.1
430,938 - A4249_RS02075 0.14 +0.7
430,938 - A4249_RS02075 0.14 -0.2
431,045 + A4249_RS02075 0.26 -0.3
431,199 + A4249_RS02075 0.44 -0.8
431,200 - A4249_RS02075 0.44 -0.3
431,200 - A4249_RS02075 0.44 +0.1
431,200 - A4249_RS02075 0.44 -0.9
431,200 - A4249_RS02075 0.44 +0.3
431,202 - A4249_RS02075 0.45 -0.5
431,291 + A4249_RS02075 0.55 +0.3
431,291 + A4249_RS02075 0.55 +0.3
431,291 + A4249_RS02075 0.55 -0.2
431,292 - A4249_RS02075 0.55 +0.4
431,292 - A4249_RS02075 0.55 -0.2
431,292 - A4249_RS02075 0.55 -0.5
431,336 + A4249_RS02075 0.60 -0.3
431,337 - A4249_RS02075 0.60 -1.1
431,337 - A4249_RS02075 0.60 +0.7
431,388 - A4249_RS02075 0.66 +0.2
431,555 + A4249_RS02075 0.86 -0.3
431,555 + A4249_RS02075 0.86 -0.2
431,555 + A4249_RS02075 0.86 +0.2
431,555 + A4249_RS02075 0.86 -0.8
431,555 + A4249_RS02075 0.86 -0.1
431,555 + A4249_RS02075 0.86 -0.7
431,555 + A4249_RS02075 0.86 -0.0
431,555 + A4249_RS02075 0.86 +0.8
431,555 + A4249_RS02075 0.86 -1.1
431,555 + A4249_RS02075 0.86 +0.5
431,555 + A4249_RS02075 0.86 +1.3
431,555 + A4249_RS02075 0.86 +0.4
431,555 + A4249_RS02075 0.86 -0.6
431,555 + A4249_RS02075 0.86 +0.6
431,556 - A4249_RS02075 0.86 -0.6
431,556 - A4249_RS02075 0.86 +1.0
431,556 - A4249_RS02075 0.86 -0.1
431,556 - A4249_RS02075 0.86 -0.8
431,556 - A4249_RS02075 0.86 +0.1
431,556 - A4249_RS02075 0.86 +0.0
431,556 - A4249_RS02075 0.86 +0.1
431,556 - A4249_RS02075 0.86 -1.5
431,556 - A4249_RS02075 0.86 +0.9
431,556 - A4249_RS02075 0.86 +0.5
431,556 - A4249_RS02075 0.86 -1.1
431,556 - A4249_RS02075 0.86 -0.4
431,556 - A4249_RS02075 0.86 -0.2
431,556 - A4249_RS02075 0.86 -0.1
431,556 - A4249_RS02075 0.86 -0.7
431,557 + A4249_RS02075 0.86 +1.9
431,557 + A4249_RS02075 0.86 +0.6
431,558 - A4249_RS02075 0.86 -1.3
431,558 - A4249_RS02075 0.86 -0.4
431,558 - A4249_RS02075 0.86 -0.4
431,558 - A4249_RS02075 0.86 -0.7
431,558 - A4249_RS02075 0.86 -1.2
431,558 - A4249_RS02075 0.86 -1.0
431,558 - A4249_RS02075 0.86 +1.2
431,559 - A4249_RS02075 0.86 -0.1
431,622 - +0.1

Or see this region's nucleotide sequence