Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01110

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01105 and A4249_RS01110 overlap by 4 nucleotidesA4249_RS01110 and A4249_RS01115 are separated by 115 nucleotides A4249_RS01105: A4249_RS01105 - YncE family protein, at 212,017 to 213,456 _RS01105 A4249_RS01110: A4249_RS01110 - DUF305 domain-containing protein, at 213,453 to 213,860 _RS01110 A4249_RS01115: A4249_RS01115 - LysR substrate-binding domain-containing protein, at 213,976 to 214,860 _RS01115 Position (kb) 213 214Strain fitness (log2 ratio) -2 -1 0 1 2at 212.609 kb on + strand, within A4249_RS01105at 212.610 kb on - strand, within A4249_RS01105at 212.645 kb on + strand, within A4249_RS01105at 212.645 kb on + strand, within A4249_RS01105at 212.646 kb on - strand, within A4249_RS01105at 212.646 kb on - strand, within A4249_RS01105at 212.646 kb on - strand, within A4249_RS01105at 212.646 kb on - strand, within A4249_RS01105at 212.716 kb on + strand, within A4249_RS01105at 212.717 kb on - strand, within A4249_RS01105at 212.717 kb on - strand, within A4249_RS01105at 212.875 kb on + strand, within A4249_RS01105at 212.876 kb on - strand, within A4249_RS01105at 212.876 kb on - strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.909 kb on + strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.910 kb on - strand, within A4249_RS01105at 212.916 kb on - strand, within A4249_RS01105at 212.984 kb on + strand, within A4249_RS01105at 212.984 kb on + strand, within A4249_RS01105at 212.984 kb on + strand, within A4249_RS01105at 212.985 kb on - strand, within A4249_RS01105at 213.011 kb on + strand, within A4249_RS01105at 213.011 kb on + strand, within A4249_RS01105at 213.011 kb on + strand, within A4249_RS01105at 213.011 kb on + strand, within A4249_RS01105at 213.011 kb on + strand, within A4249_RS01105at 213.012 kb on - strand, within A4249_RS01105at 213.012 kb on - strand, within A4249_RS01105at 213.012 kb on - strand, within A4249_RS01105at 213.012 kb on - strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.089 kb on + strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.090 kb on - strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.096 kb on + strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.097 kb on - strand, within A4249_RS01105at 213.218 kb on + strand, within A4249_RS01105at 213.218 kb on + strand, within A4249_RS01105at 213.219 kb on - strand, within A4249_RS01105at 213.219 kb on - strand, within A4249_RS01105at 213.219 kb on - strand, within A4249_RS01105at 213.219 kb on - strand, within A4249_RS01105at 213.219 kb on - strand, within A4249_RS01105at 213.329 kb on + strandat 213.329 kb on + strandat 213.329 kb on + strandat 213.329 kb on + strandat 213.330 kb on - strandat 213.330 kb on - strandat 213.330 kb on - strandat 213.526 kb on + strand, within A4249_RS01110at 213.527 kb on - strand, within A4249_RS01110at 213.527 kb on - strand, within A4249_RS01110at 213.527 kb on - strand, within A4249_RS01110at 213.527 kb on - strand, within A4249_RS01110at 213.608 kb on - strand, within A4249_RS01110at 213.699 kb on + strand, within A4249_RS01110at 213.700 kb on - strand, within A4249_RS01110at 213.700 kb on - strand, within A4249_RS01110at 213.700 kb on - strand, within A4249_RS01110at 213.700 kb on - strand, within A4249_RS01110at 213.700 kb on - strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.782 kb on + strand, within A4249_RS01110at 213.783 kb on - strand, within A4249_RS01110at 213.783 kb on - strand, within A4249_RS01110at 213.783 kb on - strand, within A4249_RS01110at 213.783 kb on - strand, within A4249_RS01110at 213.964 kb on + strandat 213.964 kb on + strandat 213.965 kb on - strandat 214.028 kb on + strandat 214.029 kb on - strandat 214.029 kb on - strandat 214.029 kb on - strandat 214.359 kb on + strand, within A4249_RS01115at 214.359 kb on + strand, within A4249_RS01115at 214.360 kb on - strand, within A4249_RS01115at 214.360 kb on - strand, within A4249_RS01115at 214.360 kb on - strand, within A4249_RS01115

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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212,609 + A4249_RS01105 0.41 -0.4
212,610 - A4249_RS01105 0.41 +0.5
212,645 + A4249_RS01105 0.44 +1.0
212,645 + A4249_RS01105 0.44 +0.5
212,646 - A4249_RS01105 0.44 +0.9
212,646 - A4249_RS01105 0.44 -0.1
212,646 - A4249_RS01105 0.44 -0.0
212,646 - A4249_RS01105 0.44 +1.6
212,716 + A4249_RS01105 0.49 -0.8
212,717 - A4249_RS01105 0.49 +1.2
212,717 - A4249_RS01105 0.49 +0.4
212,875 + A4249_RS01105 0.60 +1.2
212,876 - A4249_RS01105 0.60 +1.4
212,876 - A4249_RS01105 0.60 +0.3
212,909 + A4249_RS01105 0.62 -0.3
212,909 + A4249_RS01105 0.62 +1.1
212,909 + A4249_RS01105 0.62 +0.1
212,909 + A4249_RS01105 0.62 -0.3
212,909 + A4249_RS01105 0.62 -0.6
212,909 + A4249_RS01105 0.62 -0.0
212,909 + A4249_RS01105 0.62 -0.5
212,909 + A4249_RS01105 0.62 -0.4
212,909 + A4249_RS01105 0.62 +0.8
212,909 + A4249_RS01105 0.62 -0.3
212,910 - A4249_RS01105 0.62 -0.5
212,910 - A4249_RS01105 0.62 +0.1
212,910 - A4249_RS01105 0.62 -0.3
212,910 - A4249_RS01105 0.62 +0.1
212,910 - A4249_RS01105 0.62 -2.0
212,910 - A4249_RS01105 0.62 -0.1
212,916 - A4249_RS01105 0.62 -0.2
212,984 + A4249_RS01105 0.67 +1.4
212,984 + A4249_RS01105 0.67 +0.1
212,984 + A4249_RS01105 0.67 -0.5
212,985 - A4249_RS01105 0.67 -0.0
213,011 + A4249_RS01105 0.69 +2.1
213,011 + A4249_RS01105 0.69 -1.5
213,011 + A4249_RS01105 0.69 -0.5
213,011 + A4249_RS01105 0.69 +0.7
213,011 + A4249_RS01105 0.69 -0.1
213,012 - A4249_RS01105 0.69 -0.3
213,012 - A4249_RS01105 0.69 -1.3
213,012 - A4249_RS01105 0.69 -1.5
213,012 - A4249_RS01105 0.69 -0.2
213,089 + A4249_RS01105 0.74 -1.1
213,089 + A4249_RS01105 0.74 -1.4
213,089 + A4249_RS01105 0.74 -0.1
213,089 + A4249_RS01105 0.74 -0.0
213,089 + A4249_RS01105 0.74 -0.6
213,089 + A4249_RS01105 0.74 +0.9
213,089 + A4249_RS01105 0.74 +0.9
213,089 + A4249_RS01105 0.74 -0.3
213,089 + A4249_RS01105 0.74 +0.7
213,089 + A4249_RS01105 0.74 -1.0
213,089 + A4249_RS01105 0.74 +0.5
213,089 + A4249_RS01105 0.74 +0.2
213,090 - A4249_RS01105 0.75 +0.7
213,090 - A4249_RS01105 0.75 -0.9
213,090 - A4249_RS01105 0.75 +0.5
213,090 - A4249_RS01105 0.75 -0.5
213,090 - A4249_RS01105 0.75 -0.3
213,090 - A4249_RS01105 0.75 -0.0
213,090 - A4249_RS01105 0.75 +0.6
213,096 + A4249_RS01105 0.75 -0.5
213,096 + A4249_RS01105 0.75 -1.7
213,096 + A4249_RS01105 0.75 -1.3
213,096 + A4249_RS01105 0.75 -0.1
213,096 + A4249_RS01105 0.75 -1.0
213,096 + A4249_RS01105 0.75 -0.2
213,096 + A4249_RS01105 0.75 -0.2
213,096 + A4249_RS01105 0.75 -1.9
213,096 + A4249_RS01105 0.75 -0.3
213,096 + A4249_RS01105 0.75 +0.7
213,097 - A4249_RS01105 0.75 +0.2
213,097 - A4249_RS01105 0.75 +1.8
213,097 - A4249_RS01105 0.75 +0.2
213,097 - A4249_RS01105 0.75 +0.2
213,097 - A4249_RS01105 0.75 +1.0
213,097 - A4249_RS01105 0.75 -1.0
213,097 - A4249_RS01105 0.75 -2.0
213,097 - A4249_RS01105 0.75 +0.1
213,097 - A4249_RS01105 0.75 -0.4
213,218 + A4249_RS01105 0.83 -0.2
213,218 + A4249_RS01105 0.83 -1.0
213,219 - A4249_RS01105 0.83 +0.4
213,219 - A4249_RS01105 0.83 -0.2
213,219 - A4249_RS01105 0.83 -0.8
213,219 - A4249_RS01105 0.83 -1.4
213,219 - A4249_RS01105 0.83 -0.4
213,329 + +0.5
213,329 + +0.1
213,329 + -0.7
213,329 + -0.7
213,330 - -1.5
213,330 - -0.2
213,330 - -1.0
213,526 + A4249_RS01110 0.18 -1.3
213,527 - A4249_RS01110 0.18 -0.2
213,527 - A4249_RS01110 0.18 +0.6
213,527 - A4249_RS01110 0.18 -0.1
213,527 - A4249_RS01110 0.18 +1.9
213,608 - A4249_RS01110 0.38 -0.3
213,699 + A4249_RS01110 0.60 +0.1
213,700 - A4249_RS01110 0.61 -0.2
213,700 - A4249_RS01110 0.61 -0.5
213,700 - A4249_RS01110 0.61 -0.4
213,700 - A4249_RS01110 0.61 -1.3
213,700 - A4249_RS01110 0.61 +1.3
213,782 + A4249_RS01110 0.81 -0.3
213,782 + A4249_RS01110 0.81 +0.0
213,782 + A4249_RS01110 0.81 +0.2
213,782 + A4249_RS01110 0.81 +0.4
213,782 + A4249_RS01110 0.81 -0.2
213,782 + A4249_RS01110 0.81 -0.6
213,783 - A4249_RS01110 0.81 -0.2
213,783 - A4249_RS01110 0.81 -0.5
213,783 - A4249_RS01110 0.81 +0.7
213,783 - A4249_RS01110 0.81 +0.1
213,964 + +0.6
213,964 + -0.2
213,965 - -0.7
214,028 + +0.2
214,029 - +0.1
214,029 - +0.0
214,029 - +0.1
214,359 + A4249_RS01115 0.43 +0.8
214,359 + A4249_RS01115 0.43 -1.2
214,360 - A4249_RS01115 0.43 +0.4
214,360 - A4249_RS01115 0.43 +0.9
214,360 - A4249_RS01115 0.43 -0.2

Or see this region's nucleotide sequence