Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS01075

Experiment: Inosine 0.3728 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS01065 and A4249_RS01070 are separated by 218 nucleotidesA4249_RS01070 and A4249_RS01075 overlap by 4 nucleotidesA4249_RS01075 and A4249_RS01080 overlap by 20 nucleotidesA4249_RS01080 and A4249_RS01085 are separated by 14 nucleotides A4249_RS01065: A4249_RS01065 - SLC13 family permease, at 205,280 to 207,055 _RS01065 A4249_RS01070: A4249_RS01070 - DoxX family protein, at 207,274 to 207,735 _RS01070 A4249_RS01075: A4249_RS01075 - DNA-binding domain-containing protein, at 207,732 to 208,517 _RS01075 A4249_RS01080: A4249_RS01080 - DUF692 domain-containing protein, at 208,498 to 209,361 _RS01080 A4249_RS01085: A4249_RS01085 - DUF2282 domain-containing protein, at 209,376 to 209,666 _RS01085 Position (kb) 207 208 209Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 206.979 kb on + strandat 206.980 kb on - strandat 207.090 kb on + strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.091 kb on - strandat 207.106 kb on - strandat 207.126 kb on + strandat 207.127 kb on - strandat 207.127 kb on - strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.233 kb on + strandat 207.234 kb on - strandat 207.234 kb on - strandat 207.234 kb on - strandat 207.234 kb on - strandat 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.335 kb on + strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.336 kb on - strand, within A4249_RS01070at 207.383 kb on + strand, within A4249_RS01070at 207.384 kb on - strand, within A4249_RS01070at 207.384 kb on - strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.403 kb on + strand, within A4249_RS01070at 207.404 kb on - strand, within A4249_RS01070at 207.404 kb on - strand, within A4249_RS01070at 207.404 kb on - strand, within A4249_RS01070at 207.404 kb on - strand, within A4249_RS01070at 207.404 kb on - strand, within A4249_RS01070at 207.485 kb on + strand, within A4249_RS01070at 207.485 kb on + strand, within A4249_RS01070at 207.485 kb on + strand, within A4249_RS01070at 207.485 kb on + strand, within A4249_RS01070at 207.486 kb on - strand, within A4249_RS01070at 207.533 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.554 kb on + strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.555 kb on - strand, within A4249_RS01070at 207.628 kb on + strand, within A4249_RS01070at 207.628 kb on + strand, within A4249_RS01070at 207.628 kb on + strand, within A4249_RS01070at 207.629 kb on - strand, within A4249_RS01070at 207.629 kb on - strand, within A4249_RS01070at 207.715 kb on + strandat 207.716 kb on - strandat 207.986 kb on + strand, within A4249_RS01075at 207.986 kb on + strand, within A4249_RS01075at 208.067 kb on - strand, within A4249_RS01075at 208.244 kb on - strand, within A4249_RS01075at 208.244 kb on - strand, within A4249_RS01075at 208.244 kb on - strand, within A4249_RS01075at 208.285 kb on + strand, within A4249_RS01075at 208.285 kb on + strand, within A4249_RS01075at 208.285 kb on + strand, within A4249_RS01075at 208.286 kb on - strand, within A4249_RS01075at 208.286 kb on - strand, within A4249_RS01075at 208.343 kb on - strand, within A4249_RS01075at 208.640 kb on + strand, within A4249_RS01080at 208.640 kb on + strand, within A4249_RS01080at 208.640 kb on + strand, within A4249_RS01080at 208.640 kb on + strand, within A4249_RS01080at 208.641 kb on - strand, within A4249_RS01080at 208.641 kb on - strand, within A4249_RS01080at 208.641 kb on - strand, within A4249_RS01080at 208.641 kb on - strand, within A4249_RS01080at 208.641 kb on - strand, within A4249_RS01080at 208.772 kb on + strand, within A4249_RS01080at 208.772 kb on + strand, within A4249_RS01080at 208.772 kb on + strand, within A4249_RS01080at 208.772 kb on + strand, within A4249_RS01080at 208.772 kb on + strand, within A4249_RS01080at 208.773 kb on - strand, within A4249_RS01080at 208.773 kb on - strand, within A4249_RS01080at 208.773 kb on - strand, within A4249_RS01080at 208.910 kb on + strand, within A4249_RS01080at 208.911 kb on - strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.030 kb on + strand, within A4249_RS01080at 209.031 kb on - strand, within A4249_RS01080at 209.031 kb on - strand, within A4249_RS01080at 209.031 kb on - strand, within A4249_RS01080at 209.031 kb on - strand, within A4249_RS01080at 209.031 kb on - strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.232 kb on + strand, within A4249_RS01080at 209.233 kb on - strand, within A4249_RS01080at 209.233 kb on - strand, within A4249_RS01080at 209.233 kb on - strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.234 kb on + strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.235 kb on - strand, within A4249_RS01080at 209.294 kb on + strandat 209.294 kb on + strandat 209.294 kb on + strandat 209.470 kb on + strand, within A4249_RS01085at 209.471 kb on - strand, within A4249_RS01085

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C)
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206,979 + +0.5
206,980 - -1.7
207,090 + +0.4
207,091 - -0.1
207,091 - +0.3
207,091 - +0.1
207,091 - +0.5
207,091 - +1.5
207,091 - -2.9
207,091 - +0.3
207,106 - +0.1
207,126 + -0.9
207,127 - -1.4
207,127 - -0.5
207,233 + -1.7
207,233 + -1.0
207,233 + -2.3
207,233 + -0.9
207,233 + -0.7
207,233 + -0.7
207,233 + +1.5
207,234 - +0.1
207,234 - +0.5
207,234 - -0.1
207,234 - -0.9
207,335 + A4249_RS01070 0.13 -0.7
207,335 + A4249_RS01070 0.13 -0.0
207,335 + A4249_RS01070 0.13 +0.5
207,335 + A4249_RS01070 0.13 -0.1
207,335 + A4249_RS01070 0.13 -0.3
207,335 + A4249_RS01070 0.13 +0.3
207,335 + A4249_RS01070 0.13 -1.2
207,336 - A4249_RS01070 0.13 +1.5
207,336 - A4249_RS01070 0.13 -0.6
207,336 - A4249_RS01070 0.13 +0.8
207,336 - A4249_RS01070 0.13 +0.9
207,336 - A4249_RS01070 0.13 -1.2
207,336 - A4249_RS01070 0.13 -0.5
207,336 - A4249_RS01070 0.13 -1.1
207,336 - A4249_RS01070 0.13 -1.0
207,383 + A4249_RS01070 0.24 +0.1
207,384 - A4249_RS01070 0.24 -0.4
207,384 - A4249_RS01070 0.24 +0.4
207,403 + A4249_RS01070 0.28 -0.4
207,403 + A4249_RS01070 0.28 -0.7
207,403 + A4249_RS01070 0.28 +1.0
207,403 + A4249_RS01070 0.28 +0.2
207,403 + A4249_RS01070 0.28 -1.1
207,403 + A4249_RS01070 0.28 +0.2
207,404 - A4249_RS01070 0.28 -1.3
207,404 - A4249_RS01070 0.28 -0.1
207,404 - A4249_RS01070 0.28 +0.3
207,404 - A4249_RS01070 0.28 -0.4
207,404 - A4249_RS01070 0.28 -1.4
207,485 + A4249_RS01070 0.46 -0.4
207,485 + A4249_RS01070 0.46 +2.4
207,485 + A4249_RS01070 0.46 -0.7
207,485 + A4249_RS01070 0.46 -2.0
207,486 - A4249_RS01070 0.46 -0.3
207,533 + A4249_RS01070 0.56 +1.3
207,554 + A4249_RS01070 0.61 -1.4
207,554 + A4249_RS01070 0.61 -0.7
207,554 + A4249_RS01070 0.61 -0.0
207,554 + A4249_RS01070 0.61 -1.7
207,554 + A4249_RS01070 0.61 +1.0
207,554 + A4249_RS01070 0.61 +0.7
207,554 + A4249_RS01070 0.61 -0.6
207,554 + A4249_RS01070 0.61 +1.1
207,554 + A4249_RS01070 0.61 -0.0
207,554 + A4249_RS01070 0.61 -0.5
207,554 + A4249_RS01070 0.61 -2.2
207,554 + A4249_RS01070 0.61 -0.0
207,554 + A4249_RS01070 0.61 +0.6
207,554 + A4249_RS01070 0.61 -0.6
207,554 + A4249_RS01070 0.61 +0.1
207,554 + A4249_RS01070 0.61 +0.6
207,554 + A4249_RS01070 0.61 +0.4
207,554 + A4249_RS01070 0.61 -0.5
207,554 + A4249_RS01070 0.61 -0.4
207,554 + A4249_RS01070 0.61 +0.6
207,554 + A4249_RS01070 0.61 +0.2
207,554 + A4249_RS01070 0.61 -2.1
207,554 + A4249_RS01070 0.61 +0.4
207,554 + A4249_RS01070 0.61 -0.4
207,555 - A4249_RS01070 0.61 -0.4
207,555 - A4249_RS01070 0.61 -0.1
207,555 - A4249_RS01070 0.61 -0.3
207,555 - A4249_RS01070 0.61 +0.9
207,555 - A4249_RS01070 0.61 -0.1
207,555 - A4249_RS01070 0.61 -0.6
207,555 - A4249_RS01070 0.61 +0.3
207,555 - A4249_RS01070 0.61 -0.3
207,555 - A4249_RS01070 0.61 +2.1
207,555 - A4249_RS01070 0.61 -0.0
207,555 - A4249_RS01070 0.61 -1.1
207,555 - A4249_RS01070 0.61 +0.6
207,555 - A4249_RS01070 0.61 -1.3
207,555 - A4249_RS01070 0.61 +0.0
207,555 - A4249_RS01070 0.61 +0.1
207,555 - A4249_RS01070 0.61 -1.5
207,555 - A4249_RS01070 0.61 +1.1
207,555 - A4249_RS01070 0.61 +0.2
207,555 - A4249_RS01070 0.61 +0.2
207,555 - A4249_RS01070 0.61 -0.1
207,555 - A4249_RS01070 0.61 -0.8
207,555 - A4249_RS01070 0.61 -0.0
207,555 - A4249_RS01070 0.61 +0.5
207,555 - A4249_RS01070 0.61 -0.5
207,628 + A4249_RS01070 0.77 -0.6
207,628 + A4249_RS01070 0.77 -0.5
207,628 + A4249_RS01070 0.77 +0.2
207,629 - A4249_RS01070 0.77 +0.6
207,629 - A4249_RS01070 0.77 -1.4
207,715 + -1.0
207,716 - +0.4
207,986 + A4249_RS01075 0.32 -1.6
207,986 + A4249_RS01075 0.32 +0.6
208,067 - A4249_RS01075 0.43 +1.3
208,244 - A4249_RS01075 0.65 -1.0
208,244 - A4249_RS01075 0.65 -0.7
208,244 - A4249_RS01075 0.65 -0.6
208,285 + A4249_RS01075 0.70 -1.3
208,285 + A4249_RS01075 0.70 +1.2
208,285 + A4249_RS01075 0.70 -0.4
208,286 - A4249_RS01075 0.70 -0.7
208,286 - A4249_RS01075 0.70 +0.3
208,343 - A4249_RS01075 0.78 +0.5
208,640 + A4249_RS01080 0.16 +0.7
208,640 + A4249_RS01080 0.16 +0.5
208,640 + A4249_RS01080 0.16 -0.8
208,640 + A4249_RS01080 0.16 -0.3
208,641 - A4249_RS01080 0.17 +0.6
208,641 - A4249_RS01080 0.17 -1.2
208,641 - A4249_RS01080 0.17 +0.2
208,641 - A4249_RS01080 0.17 -1.0
208,641 - A4249_RS01080 0.17 +0.9
208,772 + A4249_RS01080 0.32 -0.2
208,772 + A4249_RS01080 0.32 -0.9
208,772 + A4249_RS01080 0.32 +0.2
208,772 + A4249_RS01080 0.32 +1.1
208,772 + A4249_RS01080 0.32 -1.3
208,773 - A4249_RS01080 0.32 +1.3
208,773 - A4249_RS01080 0.32 -0.1
208,773 - A4249_RS01080 0.32 -0.5
208,910 + A4249_RS01080 0.48 -0.2
208,911 - A4249_RS01080 0.48 -0.0
209,030 + A4249_RS01080 0.62 +0.5
209,030 + A4249_RS01080 0.62 -0.2
209,030 + A4249_RS01080 0.62 +0.9
209,030 + A4249_RS01080 0.62 -0.9
209,030 + A4249_RS01080 0.62 +0.2
209,030 + A4249_RS01080 0.62 +1.4
209,030 + A4249_RS01080 0.62 +0.9
209,030 + A4249_RS01080 0.62 -1.3
209,030 + A4249_RS01080 0.62 -0.2
209,030 + A4249_RS01080 0.62 +0.3
209,031 - A4249_RS01080 0.62 +1.4
209,031 - A4249_RS01080 0.62 +0.4
209,031 - A4249_RS01080 0.62 +0.1
209,031 - A4249_RS01080 0.62 -1.2
209,031 - A4249_RS01080 0.62 -0.9
209,232 + A4249_RS01080 0.85 -0.2
209,232 + A4249_RS01080 0.85 -3.0
209,232 + A4249_RS01080 0.85 -0.8
209,232 + A4249_RS01080 0.85 -0.1
209,232 + A4249_RS01080 0.85 +0.6
209,232 + A4249_RS01080 0.85 +0.1
209,232 + A4249_RS01080 0.85 -0.5
209,233 - A4249_RS01080 0.85 +0.8
209,233 - A4249_RS01080 0.85 -0.5
209,233 - A4249_RS01080 0.85 +0.6
209,234 + A4249_RS01080 0.85 -0.7
209,234 + A4249_RS01080 0.85 +0.2
209,234 + A4249_RS01080 0.85 -0.2
209,234 + A4249_RS01080 0.85 -0.4
209,234 + A4249_RS01080 0.85 -0.1
209,234 + A4249_RS01080 0.85 +0.2
209,234 + A4249_RS01080 0.85 -0.9
209,234 + A4249_RS01080 0.85 -1.0
209,234 + A4249_RS01080 0.85 -1.7
209,234 + A4249_RS01080 0.85 -0.5
209,234 + A4249_RS01080 0.85 -0.6
209,234 + A4249_RS01080 0.85 -0.1
209,234 + A4249_RS01080 0.85 -0.5
209,234 + A4249_RS01080 0.85 +0.4
209,234 + A4249_RS01080 0.85 +0.5
209,234 + A4249_RS01080 0.85 +0.2
209,234 + A4249_RS01080 0.85 -0.1
209,234 + A4249_RS01080 0.85 -0.4
209,234 + A4249_RS01080 0.85 -0.1
209,234 + A4249_RS01080 0.85 +0.3
209,234 + A4249_RS01080 0.85 -0.3
209,234 + A4249_RS01080 0.85 -0.7
209,234 + A4249_RS01080 0.85 -1.2
209,235 - A4249_RS01080 0.85 -0.6
209,235 - A4249_RS01080 0.85 +0.2
209,235 - A4249_RS01080 0.85 -0.5
209,235 - A4249_RS01080 0.85 -0.6
209,235 - A4249_RS01080 0.85 -1.9
209,235 - A4249_RS01080 0.85 -0.4
209,235 - A4249_RS01080 0.85 -1.9
209,235 - A4249_RS01080 0.85 -0.7
209,294 + -1.0
209,294 + -0.5
209,294 + +0.6
209,470 + A4249_RS01085 0.32 -0.7
209,471 - A4249_RS01085 0.33 +1.8

Or see this region's nucleotide sequence