Experiment: Inosine 0.3728 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00750 and A4249_RS00755 are separated by 1 nucleotides A4249_RS00755 and A4249_RS00760 overlap by 17 nucleotides A4249_RS00760 and A4249_RS00765 are separated by 252 nucleotides
A4249_RS00750: A4249_RS00750 - S41 family peptidase, at 141,237 to 142,508
_RS00750
A4249_RS00755: A4249_RS00755 - YbdD/YjiX family protein, at 142,510 to 142,749
_RS00755
A4249_RS00760: A4249_RS00760 - carbon starvation CstA family protein, at 142,733 to 144,820
_RS00760
A4249_RS00765: A4249_RS00765 - formate-dependent phosphoribosylglycinamide formyltransferase, at 145,073 to 146,269
_RS00765
Position (kb) 142
143
144
145 Strain fitness (log2 ratio) -1
0
1
2
3 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.777 kb on + strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 141.778 kb on - strand, within A4249_RS00750 at 142.506 kb on + strand at 142.506 kb on + strand at 142.507 kb on - strand at 142.507 kb on - strand at 142.507 kb on - strand at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.625 kb on + strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.626 kb on - strand, within A4249_RS00755 at 142.634 kb on + strand, within A4249_RS00755 at 142.821 kb on + strand at 142.822 kb on - strand at 142.848 kb on + strand at 142.849 kb on - strand at 142.849 kb on - strand at 142.849 kb on - strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.905 kb on + strand at 142.906 kb on - strand at 142.906 kb on - strand at 142.906 kb on - strand at 142.986 kb on + strand, within A4249_RS00760 at 142.986 kb on + strand, within A4249_RS00760 at 142.986 kb on + strand, within A4249_RS00760 at 143.200 kb on + strand, within A4249_RS00760 at 143.201 kb on - strand, within A4249_RS00760 at 143.235 kb on + strand, within A4249_RS00760 at 143.236 kb on - strand, within A4249_RS00760 at 143.244 kb on + strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.245 kb on - strand, within A4249_RS00760 at 143.421 kb on + strand, within A4249_RS00760 at 143.652 kb on + strand, within A4249_RS00760 at 143.653 kb on - strand, within A4249_RS00760 at 143.653 kb on - strand, within A4249_RS00760 at 143.979 kb on + strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 143.980 kb on - strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.033 kb on + strand, within A4249_RS00760 at 144.034 kb on - strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.195 kb on + strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.196 kb on - strand, within A4249_RS00760 at 144.197 kb on + strand, within A4249_RS00760 at 144.197 kb on + strand, within A4249_RS00760 at 144.197 kb on + strand, within A4249_RS00760 at 144.198 kb on - strand, within A4249_RS00760 at 144.198 kb on - strand, within A4249_RS00760 at 144.198 kb on - strand, within A4249_RS00760 at 144.198 kb on - strand, within A4249_RS00760 at 144.483 kb on + strand, within A4249_RS00760 at 144.483 kb on + strand, within A4249_RS00760 at 144.483 kb on + strand, within A4249_RS00760 at 144.483 kb on + strand, within A4249_RS00760 at 144.484 kb on - strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.582 kb on + strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.583 kb on - strand, within A4249_RS00760 at 144.641 kb on + strand at 144.641 kb on + strand at 144.641 kb on + strand at 144.641 kb on + strand at 144.641 kb on + strand at 144.642 kb on - strand at 144.642 kb on - strand at 144.642 kb on - strand at 144.642 kb on - strand at 144.642 kb on - strand at 144.666 kb on + strand at 144.687 kb on + strand at 144.687 kb on + strand at 144.687 kb on + strand at 144.687 kb on + strand at 144.688 kb on - strand at 144.688 kb on - strand at 144.688 kb on - strand at 144.688 kb on - strand at 144.688 kb on - strand at 144.688 kb on - strand at 144.797 kb on + strand at 144.797 kb on + strand at 144.797 kb on + strand at 144.798 kb on - strand at 144.798 kb on - strand at 144.798 kb on - strand at 144.897 kb on + strand at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.278 kb on + strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.279 kb on - strand, within A4249_RS00765 at 145.492 kb on + strand, within A4249_RS00765 at 145.567 kb on - strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine 0.3728 mM (C) remove 141,777 + A4249_RS00750 0.42 -0.6 141,777 + A4249_RS00750 0.42 +0.4 141,777 + A4249_RS00750 0.42 -0.5 141,777 + A4249_RS00750 0.42 -1.2 141,777 + A4249_RS00750 0.42 -0.1 141,777 + A4249_RS00750 0.42 +0.2 141,777 + A4249_RS00750 0.42 +0.2 141,777 + A4249_RS00750 0.42 -0.2 141,777 + A4249_RS00750 0.42 -0.4 141,777 + A4249_RS00750 0.42 +0.3 141,777 + A4249_RS00750 0.42 +0.3 141,778 - A4249_RS00750 0.43 -0.9 141,778 - A4249_RS00750 0.43 +0.5 141,778 - A4249_RS00750 0.43 -0.3 141,778 - A4249_RS00750 0.43 -0.2 141,778 - A4249_RS00750 0.43 -0.2 141,778 - A4249_RS00750 0.43 -0.1 141,778 - A4249_RS00750 0.43 +0.2 141,778 - A4249_RS00750 0.43 -1.5 141,778 - A4249_RS00750 0.43 +0.9 141,778 - A4249_RS00750 0.43 +1.0 142,506 + -0.1 142,506 + -1.7 142,507 - +0.2 142,507 - +0.5 142,507 - +0.5 142,625 + A4249_RS00755 0.48 -1.4 142,625 + A4249_RS00755 0.48 +2.4 142,625 + A4249_RS00755 0.48 -1.1 142,625 + A4249_RS00755 0.48 +0.1 142,625 + A4249_RS00755 0.48 -0.2 142,626 - A4249_RS00755 0.48 -0.4 142,626 - A4249_RS00755 0.48 +0.3 142,626 - A4249_RS00755 0.48 +0.9 142,626 - A4249_RS00755 0.48 +1.3 142,634 + A4249_RS00755 0.52 -1.0 142,821 + +0.9 142,822 - -0.5 142,848 + -0.3 142,849 - -0.7 142,849 - +0.2 142,849 - +0.1 142,905 + +1.0 142,905 + -0.1 142,905 + +1.2 142,905 + +0.8 142,905 + +0.5 142,905 + -1.1 142,906 - -1.2 142,906 - -0.6 142,906 - +1.1 142,986 + A4249_RS00760 0.12 -0.8 142,986 + A4249_RS00760 0.12 +0.9 142,986 + A4249_RS00760 0.12 +2.9 143,200 + A4249_RS00760 0.22 -0.6 143,201 - A4249_RS00760 0.22 -1.2 143,235 + A4249_RS00760 0.24 +0.5 143,236 - A4249_RS00760 0.24 -1.0 143,244 + A4249_RS00760 0.24 -0.4 143,245 - A4249_RS00760 0.25 +0.1 143,245 - A4249_RS00760 0.25 +2.1 143,245 - A4249_RS00760 0.25 -0.8 143,245 - A4249_RS00760 0.25 -0.1 143,245 - A4249_RS00760 0.25 +2.1 143,421 + A4249_RS00760 0.33 +1.6 143,652 + A4249_RS00760 0.44 +0.6 143,653 - A4249_RS00760 0.44 +0.5 143,653 - A4249_RS00760 0.44 -0.4 143,979 + A4249_RS00760 0.60 +0.1 143,980 - A4249_RS00760 0.60 +1.3 143,980 - A4249_RS00760 0.60 +0.1 143,980 - A4249_RS00760 0.60 +0.8 143,980 - A4249_RS00760 0.60 +0.3 143,980 - A4249_RS00760 0.60 -0.6 143,980 - A4249_RS00760 0.60 +0.5 144,033 + A4249_RS00760 0.62 +0.8 144,033 + A4249_RS00760 0.62 +2.3 144,033 + A4249_RS00760 0.62 -0.8 144,033 + A4249_RS00760 0.62 -0.3 144,033 + A4249_RS00760 0.62 +1.0 144,033 + A4249_RS00760 0.62 -0.8 144,034 - A4249_RS00760 0.62 +0.9 144,195 + A4249_RS00760 0.70 -0.6 144,195 + A4249_RS00760 0.70 +0.7 144,195 + A4249_RS00760 0.70 -0.0 144,195 + A4249_RS00760 0.70 -1.3 144,195 + A4249_RS00760 0.70 +0.5 144,195 + A4249_RS00760 0.70 +1.0 144,195 + A4249_RS00760 0.70 -1.3 144,195 + A4249_RS00760 0.70 +0.7 144,195 + A4249_RS00760 0.70 +0.9 144,196 - A4249_RS00760 0.70 -0.7 144,196 - A4249_RS00760 0.70 +0.4 144,196 - A4249_RS00760 0.70 +0.3 144,196 - A4249_RS00760 0.70 -0.6 144,196 - A4249_RS00760 0.70 -1.0 144,196 - A4249_RS00760 0.70 +1.3 144,196 - A4249_RS00760 0.70 -0.3 144,196 - A4249_RS00760 0.70 -0.2 144,196 - A4249_RS00760 0.70 +1.3 144,196 - A4249_RS00760 0.70 -1.4 144,196 - A4249_RS00760 0.70 -0.3 144,196 - A4249_RS00760 0.70 +1.5 144,197 + A4249_RS00760 0.70 +1.9 144,197 + A4249_RS00760 0.70 +0.1 144,197 + A4249_RS00760 0.70 -0.6 144,198 - A4249_RS00760 0.70 +0.7 144,198 - A4249_RS00760 0.70 -0.2 144,198 - A4249_RS00760 0.70 +0.1 144,198 - A4249_RS00760 0.70 +0.7 144,483 + A4249_RS00760 0.84 -1.5 144,483 + A4249_RS00760 0.84 +1.1 144,483 + A4249_RS00760 0.84 +0.3 144,483 + A4249_RS00760 0.84 +0.9 144,484 - A4249_RS00760 0.84 +2.9 144,582 + A4249_RS00760 0.89 -1.5 144,582 + A4249_RS00760 0.89 +1.1 144,582 + A4249_RS00760 0.89 -0.5 144,582 + A4249_RS00760 0.89 +0.1 144,582 + A4249_RS00760 0.89 -0.8 144,582 + A4249_RS00760 0.89 +0.1 144,583 - A4249_RS00760 0.89 -1.3 144,583 - A4249_RS00760 0.89 -0.8 144,583 - A4249_RS00760 0.89 -1.7 144,583 - A4249_RS00760 0.89 -0.1 144,583 - A4249_RS00760 0.89 +0.4 144,583 - A4249_RS00760 0.89 -0.3 144,641 + +0.9 144,641 + -0.2 144,641 + -0.3 144,641 + +0.1 144,641 + +1.6 144,642 - +0.2 144,642 - -0.7 144,642 - +0.9 144,642 - +1.4 144,642 - -1.1 144,666 + +0.1 144,687 + +1.1 144,687 + +1.4 144,687 + +0.1 144,687 + -0.5 144,688 - -0.2 144,688 - -0.4 144,688 - +0.4 144,688 - +0.9 144,688 - +0.5 144,688 - +0.9 144,797 + +0.4 144,797 + +0.3 144,797 + +1.6 144,798 - -1.7 144,798 - -0.5 144,798 - -0.6 144,897 + -0.2 145,278 + A4249_RS00765 0.17 -0.9 145,278 + A4249_RS00765 0.17 -0.7 145,278 + A4249_RS00765 0.17 +0.8 145,278 + A4249_RS00765 0.17 -0.1 145,278 + A4249_RS00765 0.17 +0.1 145,278 + A4249_RS00765 0.17 +1.3 145,278 + A4249_RS00765 0.17 +0.1 145,278 + A4249_RS00765 0.17 -0.6 145,278 + A4249_RS00765 0.17 -0.2 145,278 + A4249_RS00765 0.17 -0.9 145,279 - A4249_RS00765 0.17 -0.1 145,279 - A4249_RS00765 0.17 -0.5 145,279 - A4249_RS00765 0.17 -0.4 145,279 - A4249_RS00765 0.17 +0.5 145,279 - A4249_RS00765 0.17 +0.9 145,279 - A4249_RS00765 0.17 +1.4 145,279 - A4249_RS00765 0.17 -0.7 145,279 - A4249_RS00765 0.17 -0.7 145,492 + A4249_RS00765 0.35 -0.2 145,567 - A4249_RS00765 0.41 -0.9 145,731 + A4249_RS00765 0.55 -0.0 145,731 + A4249_RS00765 0.55 -0.2 145,731 + A4249_RS00765 0.55 -1.1 145,731 + A4249_RS00765 0.55 -0.7 145,731 + A4249_RS00765 0.55 +0.1 145,731 + A4249_RS00765 0.55 +0.5 145,731 + A4249_RS00765 0.55 -0.5 145,731 + A4249_RS00765 0.55 -0.4 145,731 + A4249_RS00765 0.55 -0.0 145,731 + A4249_RS00765 0.55 +0.7 145,731 + A4249_RS00765 0.55 -0.3 145,731 + A4249_RS00765 0.55 -0.5 145,732 - A4249_RS00765 0.55 +0.1 145,732 - A4249_RS00765 0.55 -1.7 145,732 - A4249_RS00765 0.55 +0.4 145,732 - A4249_RS00765 0.55 +0.4 145,732 - A4249_RS00765 0.55 -0.4
Or see this region's nucleotide sequence