Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02322

Experiment: TSB with Dermcidin 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 2 ug/mL
2,392,040	+		MPMX26_02321	0.51	+0.2
2,392,045	+		MPMX26_02321	0.51	+0.1
2,392,045	+		MPMX26_02321	0.51	-0.2
2,392,094	+		MPMX26_02321	0.55	-0.4
2,392,232	+		MPMX26_02321	0.65	+0.3
2,392,232	+		MPMX26_02321	0.65	-0.6
2,392,232	+		MPMX26_02321	0.65	-1.2
2,392,232	+		MPMX26_02321	0.65	+0.8
2,392,232	+		MPMX26_02321	0.65	-0.2
2,392,232	+		MPMX26_02321	0.65	-0.5
2,392,232	+		MPMX26_02321	0.65	-1.0
2,392,232	+		MPMX26_02321	0.65	-0.6
2,392,232	+		MPMX26_02321	0.65	-0.2
2,392,232	+		MPMX26_02321	0.65	-0.4
2,392,232	+		MPMX26_02321	0.65	+0.1
2,392,232	+		MPMX26_02321	0.65	+0.2
2,392,232	+		MPMX26_02321	0.65	+0.2
2,392,232	+		MPMX26_02321	0.65	-0.1
2,392,232	+		MPMX26_02321	0.65	+0.4
2,392,232	+		MPMX26_02321	0.65	-0.6
2,392,232	+		MPMX26_02321	0.65	-0.2
2,392,232	+		MPMX26_02321	0.65	-0.1
2,392,232	+		MPMX26_02321	0.65	-1.3
2,392,237	+		MPMX26_02321	0.65	-0.7
2,392,268	+		MPMX26_02321	0.68	-0.8
2,392,268	+		MPMX26_02321	0.68	-0.3
2,392,378	+		MPMX26_02321	0.76	+0.6
2,392,423	+		MPMX26_02321	0.80	-0.6
2,392,466	+		MPMX26_02321	0.83	+0.5
2,392,466	+		MPMX26_02321	0.83	-1.3
2,392,556	+		MPMX26_02321	0.90	+0.2
2,392,604	+				+0.7
2,392,640	+				-1.1
2,392,661	+				-0.0
2,392,672	+				+0.6
2,392,672	+				-0.0
2,392,672	+				+0.0
2,392,672	+				-0.2
2,392,672	+				+0.7
2,393,063	-				-0.0
2,393,065	-				-0.6
2,393,128	-		MPMX26_02322	0.18	+0.9
2,393,167	+		MPMX26_02322	0.26	-0.5
2,393,175	-		MPMX26_02322	0.27	-0.4
2,393,175	-		MPMX26_02322	0.27	-0.4
2,393,175	-		MPMX26_02322	0.27	+0.1
2,393,175	-		MPMX26_02322	0.27	-0.6
2,393,175	-		MPMX26_02322	0.27	-0.6
2,393,175	-		MPMX26_02322	0.27	-0.6
2,393,175	-		MPMX26_02322	0.27	-0.2
2,393,175	-		MPMX26_02322	0.27	-0.2
2,393,175	-		MPMX26_02322	0.27	-1.1
2,393,175	-		MPMX26_02322	0.27	+1.0
2,393,225	-		MPMX26_02322	0.37	-0.3
2,393,230	-		MPMX26_02322	0.38	+1.3
2,393,230	-		MPMX26_02322	0.38	-0.1
2,393,240	-		MPMX26_02322	0.40	-1.9
2,393,240	-		MPMX26_02322	0.40	-0.3
2,393,279	-		MPMX26_02322	0.48	-0.4
2,393,334	-		MPMX26_02322	0.59	-0.3
2,393,334	-		MPMX26_02322	0.59	+0.1
2,393,334	-		MPMX26_02322	0.59	+0.6
2,393,334	-		MPMX26_02322	0.59	+0.6
2,393,340	-		MPMX26_02322	0.60	-0.0
2,393,346	-		MPMX26_02322	0.61	+0.1
2,393,346	-		MPMX26_02322	0.61	-0.2
2,393,346	-		MPMX26_02322	0.61	+0.2
2,393,346	-		MPMX26_02322	0.61	+1.6
2,393,346	-		MPMX26_02322	0.61	-0.3
2,393,346	-		MPMX26_02322	0.61	-0.4
2,393,346	-		MPMX26_02322	0.61	+0.3
2,393,346	-		MPMX26_02322	0.61	-0.7
2,393,353	-		MPMX26_02322	0.63	-0.4
2,393,353	-		MPMX26_02322	0.63	-1.5
2,393,353	-		MPMX26_02322	0.63	-0.7
2,393,384	-		MPMX26_02322	0.69	-0.3
2,393,384	-		MPMX26_02322	0.69	-0.2
2,393,384	-		MPMX26_02322	0.69	+0.5
2,393,419	-		MPMX26_02322	0.76	+0.3
2,393,426	-		MPMX26_02322	0.77	-0.3
2,393,426	-		MPMX26_02322	0.77	-0.2
2,393,426	-		MPMX26_02322	0.77	-0.4
2,393,426	-		MPMX26_02322	0.77	+0.2
2,393,426	-		MPMX26_02322	0.77	+0.2
2,393,426	-		MPMX26_02322	0.77	-0.3
2,393,470	-		MPMX26_02322	0.86	-0.4
2,393,494	-				-0.2
2,393,519	-				-0.9
2,393,519	-				-1.1
2,393,529	-				-0.6
2,393,529	-				-0.5
2,393,529	-				-0.9
2,393,539	-				-0.6
2,393,539	-				-0.3
2,393,539	-				-0.5
2,393,742	-				-1.4
2,393,755	-				+0.6
2,393,779	-				-0.1
2,393,925	-		MPMX26_02323	0.22	-1.5
2,393,925	-		MPMX26_02323	0.22	-1.3
2,394,010	-		MPMX26_02323	0.30	-0.5
2,394,010	-		MPMX26_02323	0.30	-0.6
2,394,010	-		MPMX26_02323	0.30	-0.1
2,394,064	-		MPMX26_02323	0.36	-1.0
2,394,071	-		MPMX26_02323	0.36	-0.2
2,394,076	-		MPMX26_02323	0.37	-0.6
2,394,076	-		MPMX26_02323	0.37	+0.5
2,394,081	-		MPMX26_02323	0.37	-0.6
2,394,093	-		MPMX26_02323	0.38	-1.3
2,394,100	-		MPMX26_02323	0.39	-0.5
2,394,117	-		MPMX26_02323	0.41	-0.5
2,394,117	-		MPMX26_02323	0.41	+0.0
2,394,117	-		MPMX26_02323	0.41	-0.6
2,394,211	-		MPMX26_02323	0.50	-1.7
2,394,222	-		MPMX26_02323	0.51	+0.2
2,394,222	-		MPMX26_02323	0.51	-1.0
2,394,222	-		MPMX26_02323	0.51	-0.9
2,394,261	-		MPMX26_02323	0.55	-0.2
2,394,279	-		MPMX26_02323	0.57	-0.2
2,394,280	-		MPMX26_02323	0.57	+0.6
2,394,285	-		MPMX26_02323	0.58	-1.6
2,394,285	-		MPMX26_02323	0.58	-1.3
2,394,286	-		MPMX26_02323	0.58	-0.2
2,394,305	-		MPMX26_02323	0.60	+1.6
2,394,346	-		MPMX26_02323	0.64	-0.2
2,394,346	-		MPMX26_02323	0.64	-1.1
2,394,350	-		MPMX26_02323	0.64	-0.3
2,394,355	-		MPMX26_02323	0.65	-0.1
2,394,376	-		MPMX26_02323	0.67	+0.6
2,394,376	-		MPMX26_02323	0.67	+0.4
2,394,382	-		MPMX26_02323	0.67	+0.1
2,394,417	-		MPMX26_02323	0.71	+0.1
2,394,417	-		MPMX26_02323	0.71	-0.6
2,394,424	-		MPMX26_02323	0.72	+0.2
2,394,424	-		MPMX26_02323	0.72	+1.0
2,394,424	-		MPMX26_02323	0.72	-0.9
2,394,424	-		MPMX26_02323	0.72	+0.8
2,394,431	-		MPMX26_02323	0.72	-0.6
2,394,454	-		MPMX26_02323	0.75	-1.6
2,394,454	-		MPMX26_02323	0.75	-0.3
2,394,454	-		MPMX26_02323	0.75	-1.3
2,394,484	-		MPMX26_02323	0.78	-0.7
2,394,484	-		MPMX26_02323	0.78	-0.9
2,394,484	-		MPMX26_02323	0.78	-0.5
2,394,484	-		MPMX26_02323	0.78	-0.2
2,394,484	-		MPMX26_02323	0.78	-0.3
2,394,511	-		MPMX26_02323	0.80	-0.0
2,394,519	+		MPMX26_02323	0.81	+1.2
2,394,521	-		MPMX26_02323	0.81	+0.1
2,394,527	-		MPMX26_02323	0.82	+0.1