Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01225

Experiment: TSB with Dermcidin 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 2 ug/mL
1,298,432	+		MPMX26_01223	0.83	+0.2
1,298,473	+				+1.1
1,298,473	+				+0.1
1,298,473	+				-0.6
1,298,473	+				-0.0
1,298,473	+				-0.0
1,298,473	+				-0.5
1,298,473	+				-0.4
1,298,473	+				-0.0
1,298,620	+		MPMX26_01224	0.11	+0.5
1,298,627	-		MPMX26_01224	0.12	+0.5
1,298,668	+		MPMX26_01224	0.18	-1.4
1,298,668	+		MPMX26_01224	0.18	+0.7
1,298,693	+		MPMX26_01224	0.21	-0.5
1,298,703	+		MPMX26_01224	0.22	-0.1
1,298,708	+		MPMX26_01224	0.23	-1.3
1,298,708	+		MPMX26_01224	0.23	+0.2
1,298,708	+		MPMX26_01224	0.23	-0.0
1,298,708	+		MPMX26_01224	0.23	-0.7
1,298,716	+		MPMX26_01224	0.24	+0.4
1,298,716	+		MPMX26_01224	0.24	-0.6
1,298,716	+		MPMX26_01224	0.24	+0.4
1,298,721	+		MPMX26_01224	0.24	+0.4
1,298,722	+		MPMX26_01224	0.25	+0.0
1,298,722	+		MPMX26_01224	0.25	+0.9
1,298,722	+		MPMX26_01224	0.25	-1.2
1,298,748	+		MPMX26_01224	0.28	+0.0
1,298,748	+		MPMX26_01224	0.28	+0.1
1,298,748	+		MPMX26_01224	0.28	-0.0
1,298,748	+		MPMX26_01224	0.28	+0.5
1,298,748	+		MPMX26_01224	0.28	-0.3
1,298,748	+		MPMX26_01224	0.28	+0.8
1,298,748	+		MPMX26_01224	0.28	-0.6
1,298,748	+		MPMX26_01224	0.28	+0.5
1,298,748	+		MPMX26_01224	0.28	-2.2
1,298,748	+		MPMX26_01224	0.28	-1.5
1,298,767	+		MPMX26_01224	0.30	+0.8
1,298,823	+		MPMX26_01224	0.38	-0.4
1,298,864	+		MPMX26_01224	0.43	+0.1
1,298,942	+		MPMX26_01224	0.53	-0.8
1,298,942	+		MPMX26_01224	0.53	-0.2
1,298,974	+		MPMX26_01224	0.57	-2.1
1,298,998	+		MPMX26_01224	0.60	+2.3
1,299,019	+		MPMX26_01224	0.63	+0.3
1,299,019	+		MPMX26_01224	0.63	-0.9
1,299,030	+		MPMX26_01224	0.64	-0.8
1,299,030	+		MPMX26_01224	0.64	-0.7
1,299,030	+		MPMX26_01224	0.64	+0.0
1,299,030	+		MPMX26_01224	0.64	+0.7
1,299,030	+		MPMX26_01224	0.64	+0.8
1,299,030	+		MPMX26_01224	0.64	-0.8
1,299,030	+		MPMX26_01224	0.64	-0.2
1,299,030	+		MPMX26_01224	0.64	-0.3
1,299,066	+		MPMX26_01224	0.69	+0.7
1,299,066	+		MPMX26_01224	0.69	+0.0
1,299,105	+		MPMX26_01224	0.74	-0.0
1,299,118	+		MPMX26_01224	0.76	+1.3
1,299,143	+		MPMX26_01224	0.79	+0.2
1,299,148	+		MPMX26_01224	0.80	+1.5
1,299,219	+		MPMX26_01224	0.89	-1.2
1,299,231	+				-0.0
1,299,235	+				+0.4
1,299,338	+				-0.7
1,299,399	+				+0.0
1,299,472	+		MPMX26_01225	0.21	+1.0
1,299,473	+		MPMX26_01225	0.21	+0.0
1,299,545	-		MPMX26_01225	0.33	-1.1
1,299,607	+		MPMX26_01225	0.43	-0.9
1,299,612	+		MPMX26_01225	0.44	+0.2
1,299,612	+		MPMX26_01225	0.44	-0.8
1,299,713	+		MPMX26_01225	0.60	+0.6
1,299,779	+		MPMX26_01225	0.71	-0.9
1,299,779	+		MPMX26_01225	0.71	-0.4
1,299,780	+		MPMX26_01225	0.71	+0.2
1,299,781	+		MPMX26_01225	0.72	+0.1
1,299,789	+		MPMX26_01225	0.73	-0.3
1,299,789	+		MPMX26_01225	0.73	-0.4
1,299,789	+		MPMX26_01225	0.73	+0.7
1,299,817	+		MPMX26_01225	0.78	+0.1
1,299,863	+		MPMX26_01225	0.85	+0.2
1,299,868	+		MPMX26_01225	0.86	+0.7
1,299,886	+		MPMX26_01225	0.89	-0.4
1,299,886	+		MPMX26_01225	0.89	+0.9
1,299,896	+				+0.2
1,299,896	+				-0.7
1,299,896	+				-0.2
1,299,901	+				+0.8
1,299,911	+				-0.3
1,299,911	+				-0.5
1,299,911	+				+0.8
1,299,911	+				+0.1
1,299,911	+				-0.3
1,299,932	+				+0.5
1,299,932	+				-0.3
1,299,942	+				-0.4
1,299,965	+				-0.5
1,299,998	+				+0.2
1,300,077	+		MPMX26_01226	0.19	+0.3
1,300,077	+		MPMX26_01226	0.19	+0.7
1,300,077	+		MPMX26_01226	0.19	+0.8
1,300,077	+		MPMX26_01226	0.19	+0.1
1,300,077	+		MPMX26_01226	0.19	-0.4
1,300,077	+		MPMX26_01226	0.19	+0.3
1,300,077	+		MPMX26_01226	0.19	-0.6
1,300,077	+		MPMX26_01226	0.19	+0.3
1,300,077	+		MPMX26_01226	0.19	-0.1
1,300,077	+		MPMX26_01226	0.19	-0.3
1,300,077	+		MPMX26_01226	0.19	-1.2
1,300,077	+		MPMX26_01226	0.19	-0.5
1,300,077	+		MPMX26_01226	0.19	-0.2
1,300,077	+		MPMX26_01226	0.19	+0.6
1,300,077	+		MPMX26_01226	0.19	+0.7
1,300,077	+		MPMX26_01226	0.19	+0.9
1,300,077	+		MPMX26_01226	0.19	+1.9
1,300,077	+		MPMX26_01226	0.19	+1.5
1,300,077	+		MPMX26_01226	0.19	+0.6
1,300,082	+		MPMX26_01226	0.20	-0.7
1,300,087	+		MPMX26_01226	0.21	+0.3
1,300,087	+		MPMX26_01226	0.21	+0.6
1,300,087	+		MPMX26_01226	0.21	+1.7
1,300,087	+		MPMX26_01226	0.21	-1.6
1,300,087	+		MPMX26_01226	0.21	+0.7
1,300,087	+		MPMX26_01226	0.21	+0.2
1,300,087	+		MPMX26_01226	0.21	-0.3
1,300,087	+		MPMX26_01226	0.21	-0.1
1,300,087	+		MPMX26_01226	0.21	-0.5
1,300,087	+		MPMX26_01226	0.21	+2.9
1,300,087	+		MPMX26_01226	0.21	-0.5
1,300,087	+		MPMX26_01226	0.21	-0.2
1,300,087	+		MPMX26_01226	0.21	-1.2
1,300,092	+		MPMX26_01226	0.22	-1.0
1,300,102	+		MPMX26_01226	0.24	-0.5
1,300,102	+		MPMX26_01226	0.24	+0.3
1,300,159	+		MPMX26_01226	0.34	+1.2
1,300,163	+		MPMX26_01226	0.35	-0.9
1,300,163	+		MPMX26_01226	0.35	+0.9
1,300,175	+		MPMX26_01226	0.37	-0.5
1,300,180	+		MPMX26_01226	0.38	+1.1
1,300,186	+		MPMX26_01226	0.39	+0.7
1,300,390	+		MPMX26_01226	0.75	-0.3
1,300,417	+		MPMX26_01226	0.80	+0.1
1,300,438	+		MPMX26_01226	0.83	+1.2
1,300,700	+		MPMX26_01227	0.46	-0.9
1,300,709	+		MPMX26_01227	0.49	+0.1
1,300,743	+		MPMX26_01227	0.57	+0.0
1,300,823	+		MPMX26_01227	0.78	+1.3
1,300,823	+		MPMX26_01227	0.78	-1.0
1,300,831	-		MPMX26_01227	0.80	-0.8
1,300,833	+		MPMX26_01227	0.81	+0.0
1,300,930	+				+1.1