Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00719

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00718 and MPMX26_00719 are separated by 114 nucleotidesMPMX26_00719 and MPMX26_00720 are separated by 36 nucleotides MPMX26_00718: MPMX26_00718 - Thiosulfate sulfurtransferase GlpE, at 760,993 to 761,925 _00718 MPMX26_00719: MPMX26_00719 - hypothetical protein, at 762,040 to 762,525 _00719 MPMX26_00720: MPMX26_00720 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 762,562 to 763,221 _00720 Position (kb) 762 763Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 761.083 kb on - strandat 761.083 kb on - strandat 761.083 kb on - strandat 761.083 kb on - strandat 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.108 kb on - strand, within MPMX26_00718at 761.137 kb on - strand, within MPMX26_00718at 761.139 kb on - strand, within MPMX26_00718at 761.167 kb on - strand, within MPMX26_00718at 761.169 kb on - strand, within MPMX26_00718at 761.172 kb on - strand, within MPMX26_00718at 761.172 kb on - strand, within MPMX26_00718at 761.172 kb on - strand, within MPMX26_00718at 761.203 kb on - strand, within MPMX26_00718at 761.226 kb on - strand, within MPMX26_00718at 761.236 kb on - strand, within MPMX26_00718at 761.286 kb on - strand, within MPMX26_00718at 761.307 kb on - strand, within MPMX26_00718at 761.357 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.362 kb on - strand, within MPMX26_00718at 761.443 kb on - strand, within MPMX26_00718at 761.476 kb on - strand, within MPMX26_00718at 761.476 kb on - strand, within MPMX26_00718at 761.476 kb on - strand, within MPMX26_00718at 761.476 kb on - strand, within MPMX26_00718at 761.563 kb on - strand, within MPMX26_00718at 761.656 kb on - strand, within MPMX26_00718at 761.680 kb on - strand, within MPMX26_00718at 761.682 kb on - strand, within MPMX26_00718at 761.706 kb on - strand, within MPMX26_00718at 761.715 kb on - strand, within MPMX26_00718at 761.718 kb on - strand, within MPMX26_00718at 761.725 kb on - strand, within MPMX26_00718at 761.751 kb on - strand, within MPMX26_00718at 761.767 kb on - strand, within MPMX26_00718at 761.790 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.797 kb on - strand, within MPMX26_00718at 761.817 kb on - strand, within MPMX26_00718at 761.838 kb on - strandat 761.838 kb on - strandat 761.869 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.905 kb on - strandat 761.915 kb on - strandat 762.001 kb on + strandat 762.037 kb on + strandat 762.037 kb on + strandat 762.037 kb on + strandat 762.039 kb on + strandat 762.072 kb on + strandat 762.087 kb on + strandat 762.097 kb on + strand, within MPMX26_00719at 762.106 kb on + strand, within MPMX26_00719at 762.111 kb on + strand, within MPMX26_00719at 762.111 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.169 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.177 kb on + strand, within MPMX26_00719at 762.249 kb on + strand, within MPMX26_00719at 762.252 kb on + strand, within MPMX26_00719at 762.381 kb on + strand, within MPMX26_00719at 762.384 kb on + strand, within MPMX26_00719at 762.399 kb on + strand, within MPMX26_00719at 762.450 kb on + strand, within MPMX26_00719at 762.470 kb on + strand, within MPMX26_00719at 762.504 kb on + strandat 762.624 kb on - strandat 762.682 kb on - strand, within MPMX26_00720at 762.687 kb on - strand, within MPMX26_00720at 762.696 kb on - strand, within MPMX26_00720at 762.723 kb on - strand, within MPMX26_00720at 762.723 kb on - strand, within MPMX26_00720at 762.748 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.768 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.778 kb on - strand, within MPMX26_00720at 762.798 kb on - strand, within MPMX26_00720at 762.855 kb on - strand, within MPMX26_00720at 762.871 kb on - strand, within MPMX26_00720at 762.898 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 762.903 kb on - strand, within MPMX26_00720at 763.012 kb on - strand, within MPMX26_00720at 763.015 kb on - strand, within MPMX26_00720at 763.041 kb on - strand, within MPMX26_00720at 763.053 kb on - strand, within MPMX26_00720at 763.117 kb on - strand, within MPMX26_00720at 763.122 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.132 kb on - strand, within MPMX26_00720at 763.195 kb on - strandat 763.219 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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761,083 - +0.5
761,083 - -0.9
761,083 - -0.2
761,083 - +0.2
761,108 - MPMX26_00718 0.12 +0.3
761,108 - MPMX26_00718 0.12 +2.4
761,108 - MPMX26_00718 0.12 -1.7
761,108 - MPMX26_00718 0.12 -0.9
761,108 - MPMX26_00718 0.12 +0.7
761,108 - MPMX26_00718 0.12 +0.3
761,108 - MPMX26_00718 0.12 -0.1
761,108 - MPMX26_00718 0.12 -1.9
761,108 - MPMX26_00718 0.12 +0.3
761,108 - MPMX26_00718 0.12 -0.8
761,108 - MPMX26_00718 0.12 -0.2
761,108 - MPMX26_00718 0.12 -0.6
761,108 - MPMX26_00718 0.12 -0.7
761,108 - MPMX26_00718 0.12 +0.5
761,108 - MPMX26_00718 0.12 +0.9
761,108 - MPMX26_00718 0.12 +0.3
761,108 - MPMX26_00718 0.12 +0.7
761,108 - MPMX26_00718 0.12 +0.3
761,108 - MPMX26_00718 0.12 -0.6
761,108 - MPMX26_00718 0.12 -0.3
761,108 - MPMX26_00718 0.12 -0.1
761,108 - MPMX26_00718 0.12 -0.3
761,108 - MPMX26_00718 0.12 -1.1
761,108 - MPMX26_00718 0.12 +0.9
761,108 - MPMX26_00718 0.12 -0.3
761,108 - MPMX26_00718 0.12 +0.6
761,108 - MPMX26_00718 0.12 -0.9
761,108 - MPMX26_00718 0.12 +0.4
761,108 - MPMX26_00718 0.12 +0.2
761,108 - MPMX26_00718 0.12 -0.4
761,108 - MPMX26_00718 0.12 +1.0
761,108 - MPMX26_00718 0.12 -0.1
761,108 - MPMX26_00718 0.12 +0.2
761,108 - MPMX26_00718 0.12 +0.9
761,137 - MPMX26_00718 0.15 -0.3
761,139 - MPMX26_00718 0.16 -1.5
761,167 - MPMX26_00718 0.19 -0.3
761,169 - MPMX26_00718 0.19 -0.0
761,172 - MPMX26_00718 0.19 +0.6
761,172 - MPMX26_00718 0.19 +0.0
761,172 - MPMX26_00718 0.19 -0.1
761,203 - MPMX26_00718 0.23 -0.9
761,226 - MPMX26_00718 0.25 +1.2
761,236 - MPMX26_00718 0.26 -0.9
761,286 - MPMX26_00718 0.31 -0.1
761,307 - MPMX26_00718 0.34 -0.6
761,357 - MPMX26_00718 0.39 -0.1
761,362 - MPMX26_00718 0.40 -1.4
761,362 - MPMX26_00718 0.40 -0.7
761,362 - MPMX26_00718 0.40 -0.7
761,362 - MPMX26_00718 0.40 +0.6
761,362 - MPMX26_00718 0.40 +0.9
761,362 - MPMX26_00718 0.40 -0.2
761,362 - MPMX26_00718 0.40 +0.5
761,362 - MPMX26_00718 0.40 -0.5
761,362 - MPMX26_00718 0.40 -0.5
761,362 - MPMX26_00718 0.40 -0.4
761,362 - MPMX26_00718 0.40 -0.5
761,362 - MPMX26_00718 0.40 -1.2
761,362 - MPMX26_00718 0.40 +0.1
761,362 - MPMX26_00718 0.40 +2.1
761,362 - MPMX26_00718 0.40 +0.1
761,362 - MPMX26_00718 0.40 -0.4
761,362 - MPMX26_00718 0.40 +1.0
761,362 - MPMX26_00718 0.40 -0.3
761,362 - MPMX26_00718 0.40 -0.1
761,362 - MPMX26_00718 0.40 -0.6
761,362 - MPMX26_00718 0.40 -2.3
761,362 - MPMX26_00718 0.40 -0.2
761,362 - MPMX26_00718 0.40 -0.7
761,362 - MPMX26_00718 0.40 -0.7
761,362 - MPMX26_00718 0.40 -0.1
761,362 - MPMX26_00718 0.40 -0.8
761,362 - MPMX26_00718 0.40 -0.6
761,362 - MPMX26_00718 0.40 -0.4
761,362 - MPMX26_00718 0.40 -0.5
761,362 - MPMX26_00718 0.40 +0.0
761,362 - MPMX26_00718 0.40 +0.8
761,362 - MPMX26_00718 0.40 -0.9
761,443 - MPMX26_00718 0.48 -0.5
761,476 - MPMX26_00718 0.52 -1.5
761,476 - MPMX26_00718 0.52 -0.2
761,476 - MPMX26_00718 0.52 -1.7
761,476 - MPMX26_00718 0.52 -0.7
761,563 - MPMX26_00718 0.61 -0.5
761,656 - MPMX26_00718 0.71 -1.7
761,680 - MPMX26_00718 0.74 -0.2
761,682 - MPMX26_00718 0.74 -0.1
761,706 - MPMX26_00718 0.76 -1.3
761,715 - MPMX26_00718 0.77 -0.4
761,718 - MPMX26_00718 0.78 -0.1
761,725 - MPMX26_00718 0.78 -1.6
761,751 - MPMX26_00718 0.81 -0.1
761,767 - MPMX26_00718 0.83 -2.4
761,790 - MPMX26_00718 0.85 +0.0
761,797 - MPMX26_00718 0.86 -1.6
761,797 - MPMX26_00718 0.86 +0.5
761,797 - MPMX26_00718 0.86 -1.3
761,797 - MPMX26_00718 0.86 -0.7
761,817 - MPMX26_00718 0.88 -0.5
761,838 - -0.1
761,838 - -1.1
761,869 - -0.9
761,905 - -0.7
761,905 - +1.4
761,905 - +1.3
761,905 - +1.2
761,915 - -0.7
762,001 + -0.2
762,037 + +0.0
762,037 + +0.0
762,037 + +0.9
762,039 + +0.0
762,072 + -0.2
762,087 + -0.5
762,097 + MPMX26_00719 0.12 +0.2
762,106 + MPMX26_00719 0.14 +0.6
762,111 + MPMX26_00719 0.15 +0.1
762,111 + MPMX26_00719 0.15 -0.6
762,169 + MPMX26_00719 0.27 +1.9
762,169 + MPMX26_00719 0.27 +0.9
762,169 + MPMX26_00719 0.27 +0.3
762,169 + MPMX26_00719 0.27 +1.4
762,169 + MPMX26_00719 0.27 +1.4
762,169 + MPMX26_00719 0.27 -1.2
762,177 + MPMX26_00719 0.28 -0.1
762,177 + MPMX26_00719 0.28 -0.6
762,177 + MPMX26_00719 0.28 +0.3
762,177 + MPMX26_00719 0.28 -1.1
762,177 + MPMX26_00719 0.28 +2.4
762,177 + MPMX26_00719 0.28 -0.2
762,177 + MPMX26_00719 0.28 +0.9
762,177 + MPMX26_00719 0.28 +0.5
762,249 + MPMX26_00719 0.43 +0.3
762,252 + MPMX26_00719 0.44 -1.0
762,381 + MPMX26_00719 0.70 +0.6
762,384 + MPMX26_00719 0.71 +0.3
762,399 + MPMX26_00719 0.74 +0.7
762,450 + MPMX26_00719 0.84 +1.7
762,470 + MPMX26_00719 0.88 +0.4
762,504 + +0.9
762,624 - -0.5
762,682 - MPMX26_00720 0.18 -1.9
762,687 - MPMX26_00720 0.19 +0.4
762,696 - MPMX26_00720 0.20 -0.6
762,723 - MPMX26_00720 0.24 +0.7
762,723 - MPMX26_00720 0.24 -1.2
762,748 - MPMX26_00720 0.28 -0.4
762,768 - MPMX26_00720 0.31 -0.0
762,768 - MPMX26_00720 0.31 -0.1
762,768 - MPMX26_00720 0.31 -0.5
762,778 - MPMX26_00720 0.33 -1.1
762,778 - MPMX26_00720 0.33 -0.5
762,778 - MPMX26_00720 0.33 -0.4
762,778 - MPMX26_00720 0.33 -0.1
762,798 - MPMX26_00720 0.36 -2.8
762,855 - MPMX26_00720 0.44 +0.6
762,871 - MPMX26_00720 0.47 -0.3
762,898 - MPMX26_00720 0.51 +0.9
762,903 - MPMX26_00720 0.52 -1.0
762,903 - MPMX26_00720 0.52 -1.2
762,903 - MPMX26_00720 0.52 -0.1
762,903 - MPMX26_00720 0.52 +0.1
762,903 - MPMX26_00720 0.52 +1.3
763,012 - MPMX26_00720 0.68 +1.2
763,015 - MPMX26_00720 0.69 +0.6
763,041 - MPMX26_00720 0.73 +0.0
763,053 - MPMX26_00720 0.74 +1.2
763,117 - MPMX26_00720 0.84 +0.0
763,122 - MPMX26_00720 0.85 +0.4
763,132 - MPMX26_00720 0.86 -0.3
763,132 - MPMX26_00720 0.86 +0.4
763,132 - MPMX26_00720 0.86 -0.3
763,132 - MPMX26_00720 0.86 +0.5
763,132 - MPMX26_00720 0.86 +1.9
763,132 - MPMX26_00720 0.86 -0.4
763,132 - MPMX26_00720 0.86 +0.5
763,132 - MPMX26_00720 0.86 +0.1
763,132 - MPMX26_00720 0.86 +0.1
763,132 - MPMX26_00720 0.86 +0.7
763,132 - MPMX26_00720 0.86 +0.9
763,132 - MPMX26_00720 0.86 +0.6
763,195 - +0.4
763,219 - +0.2

Or see this region's nucleotide sequence