Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00591

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00589 and MPMX26_00590 are separated by 19 nucleotidesMPMX26_00590 and MPMX26_00591 are separated by 9 nucleotidesMPMX26_00591 and MPMX26_00592 are separated by 125 nucleotidesMPMX26_00592 and MPMX26_00593 are separated by 91 nucleotidesMPMX26_00593 and MPMX26_00594 are separated by 12 nucleotides MPMX26_00589: MPMX26_00589 - hypothetical protein, at 624,883 to 625,560 _00589 MPMX26_00590: MPMX26_00590 - hypothetical protein, at 625,580 to 625,846 _00590 MPMX26_00591: MPMX26_00591 - Stringent starvation protein A, at 625,856 to 626,509 _00591 MPMX26_00592: MPMX26_00592 - hypothetical protein, at 626,635 to 626,754 _00592 MPMX26_00593: MPMX26_00593 - 30S ribosomal protein S9, at 626,846 to 627,232 _00593 MPMX26_00594: MPMX26_00594 - 50S ribosomal protein L13, at 627,245 to 627,673 _00594 Position (kb) 625 626 627Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 624.906 kb on - strandat 624.913 kb on - strandat 624.913 kb on - strandat 624.913 kb on - strandat 624.965 kb on - strand, within MPMX26_00589at 624.972 kb on - strand, within MPMX26_00589at 624.976 kb on - strand, within MPMX26_00589at 624.976 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.985 kb on - strand, within MPMX26_00589at 624.995 kb on - strand, within MPMX26_00589at 624.995 kb on - strand, within MPMX26_00589at 625.000 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.002 kb on - strand, within MPMX26_00589at 625.005 kb on - strand, within MPMX26_00589at 625.015 kb on - strand, within MPMX26_00589at 625.023 kb on - strand, within MPMX26_00589at 625.023 kb on - strand, within MPMX26_00589at 625.023 kb on - strand, within MPMX26_00589at 625.023 kb on - strand, within MPMX26_00589at 625.028 kb on - strand, within MPMX26_00589at 625.033 kb on - strand, within MPMX26_00589at 625.118 kb on - strand, within MPMX26_00589at 625.126 kb on - strand, within MPMX26_00589at 625.126 kb on - strand, within MPMX26_00589at 625.128 kb on - strand, within MPMX26_00589at 625.158 kb on - strand, within MPMX26_00589at 625.164 kb on - strand, within MPMX26_00589at 625.266 kb on - strand, within MPMX26_00589at 625.266 kb on - strand, within MPMX26_00589at 625.266 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.276 kb on - strand, within MPMX26_00589at 625.345 kb on - strand, within MPMX26_00589at 625.345 kb on - strand, within MPMX26_00589at 625.345 kb on - strand, within MPMX26_00589at 625.369 kb on - strand, within MPMX26_00589at 625.405 kb on - strand, within MPMX26_00589at 625.432 kb on - strand, within MPMX26_00589at 625.485 kb on - strand, within MPMX26_00589at 625.564 kb on - strandat 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.735 kb on - strand, within MPMX26_00590at 625.766 kb on - strand, within MPMX26_00590at 625.766 kb on - strand, within MPMX26_00590at 625.807 kb on - strand, within MPMX26_00590at 625.807 kb on - strand, within MPMX26_00590at 625.811 kb on - strand, within MPMX26_00590at 625.834 kb on - strandat 626.003 kb on - strand, within MPMX26_00591at 626.003 kb on - strand, within MPMX26_00591at 626.003 kb on - strand, within MPMX26_00591at 626.096 kb on - strand, within MPMX26_00591at 626.111 kb on - strand, within MPMX26_00591at 626.148 kb on - strand, within MPMX26_00591at 626.179 kb on - strand, within MPMX26_00591at 626.186 kb on - strand, within MPMX26_00591at 626.192 kb on - strand, within MPMX26_00591at 626.192 kb on - strand, within MPMX26_00591at 626.197 kb on - strand, within MPMX26_00591at 626.197 kb on - strand, within MPMX26_00591at 626.229 kb on - strand, within MPMX26_00591at 626.229 kb on - strand, within MPMX26_00591at 626.229 kb on - strand, within MPMX26_00591at 626.229 kb on - strand, within MPMX26_00591at 626.229 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.239 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.241 kb on - strand, within MPMX26_00591at 626.309 kb on - strand, within MPMX26_00591at 626.309 kb on - strand, within MPMX26_00591at 626.309 kb on - strand, within MPMX26_00591at 626.330 kb on - strand, within MPMX26_00591at 626.353 kb on - strand, within MPMX26_00591at 626.360 kb on - strand, within MPMX26_00591at 626.371 kb on - strand, within MPMX26_00591at 626.371 kb on - strand, within MPMX26_00591at 626.371 kb on - strand, within MPMX26_00591at 626.371 kb on - strand, within MPMX26_00591at 626.377 kb on - strand, within MPMX26_00591at 626.377 kb on - strand, within MPMX26_00591at 626.377 kb on - strand, within MPMX26_00591at 626.377 kb on - strand, within MPMX26_00591at 626.396 kb on - strand, within MPMX26_00591at 626.443 kb on - strand, within MPMX26_00591at 626.443 kb on - strand, within MPMX26_00591at 626.443 kb on - strand, within MPMX26_00591at 626.453 kb on - strandat 626.476 kb on - strandat 626.483 kb on - strandat 626.483 kb on - strandat 626.483 kb on - strandat 626.491 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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624,906 - +0.8
624,913 - -0.2
624,913 - +0.1
624,913 - -0.8
624,965 - MPMX26_00589 0.12 -0.2
624,972 - MPMX26_00589 0.13 -1.0
624,976 - MPMX26_00589 0.14 -1.4
624,976 - MPMX26_00589 0.14 -0.3
624,985 - MPMX26_00589 0.15 +0.1
624,985 - MPMX26_00589 0.15 -1.1
624,985 - MPMX26_00589 0.15 +0.3
624,985 - MPMX26_00589 0.15 -0.9
624,985 - MPMX26_00589 0.15 +0.2
624,985 - MPMX26_00589 0.15 -0.2
624,985 - MPMX26_00589 0.15 -0.1
624,985 - MPMX26_00589 0.15 +0.3
624,995 - MPMX26_00589 0.17 -0.4
624,995 - MPMX26_00589 0.17 -0.5
625,000 - MPMX26_00589 0.17 +0.7
625,002 - MPMX26_00589 0.18 +0.3
625,002 - MPMX26_00589 0.18 +0.3
625,002 - MPMX26_00589 0.18 +0.0
625,002 - MPMX26_00589 0.18 -1.3
625,002 - MPMX26_00589 0.18 -0.2
625,002 - MPMX26_00589 0.18 +0.0
625,002 - MPMX26_00589 0.18 -0.0
625,002 - MPMX26_00589 0.18 +0.7
625,002 - MPMX26_00589 0.18 +1.3
625,005 - MPMX26_00589 0.18 -0.7
625,015 - MPMX26_00589 0.19 -0.3
625,023 - MPMX26_00589 0.21 +0.3
625,023 - MPMX26_00589 0.21 +0.5
625,023 - MPMX26_00589 0.21 -1.2
625,023 - MPMX26_00589 0.21 -0.2
625,028 - MPMX26_00589 0.21 +0.3
625,033 - MPMX26_00589 0.22 -0.3
625,118 - MPMX26_00589 0.35 +0.3
625,126 - MPMX26_00589 0.36 +0.2
625,126 - MPMX26_00589 0.36 -0.2
625,128 - MPMX26_00589 0.36 +0.1
625,158 - MPMX26_00589 0.41 -0.4
625,164 - MPMX26_00589 0.41 -0.7
625,266 - MPMX26_00589 0.56 -1.2
625,266 - MPMX26_00589 0.56 -0.6
625,266 - MPMX26_00589 0.56 -0.3
625,276 - MPMX26_00589 0.58 -0.2
625,276 - MPMX26_00589 0.58 -0.6
625,276 - MPMX26_00589 0.58 +0.1
625,276 - MPMX26_00589 0.58 -0.4
625,276 - MPMX26_00589 0.58 -0.7
625,276 - MPMX26_00589 0.58 +0.1
625,345 - MPMX26_00589 0.68 -0.2
625,345 - MPMX26_00589 0.68 +0.2
625,345 - MPMX26_00589 0.68 -0.2
625,369 - MPMX26_00589 0.72 -1.0
625,405 - MPMX26_00589 0.77 -0.3
625,432 - MPMX26_00589 0.81 +0.5
625,485 - MPMX26_00589 0.89 +0.3
625,564 - +0.6
625,735 - MPMX26_00590 0.58 +0.2
625,735 - MPMX26_00590 0.58 +0.5
625,735 - MPMX26_00590 0.58 -1.0
625,735 - MPMX26_00590 0.58 -0.2
625,735 - MPMX26_00590 0.58 +0.4
625,735 - MPMX26_00590 0.58 -0.5
625,735 - MPMX26_00590 0.58 -2.0
625,735 - MPMX26_00590 0.58 -0.0
625,735 - MPMX26_00590 0.58 -0.0
625,735 - MPMX26_00590 0.58 -0.4
625,735 - MPMX26_00590 0.58 -0.6
625,766 - MPMX26_00590 0.70 +0.4
625,766 - MPMX26_00590 0.70 -1.6
625,807 - MPMX26_00590 0.85 +0.7
625,807 - MPMX26_00590 0.85 +0.3
625,811 - MPMX26_00590 0.87 +1.0
625,834 - +0.1
626,003 - MPMX26_00591 0.22 -0.0
626,003 - MPMX26_00591 0.22 +0.5
626,003 - MPMX26_00591 0.22 +0.3
626,096 - MPMX26_00591 0.37 +0.5
626,111 - MPMX26_00591 0.39 -0.2
626,148 - MPMX26_00591 0.45 +1.2
626,179 - MPMX26_00591 0.49 -0.6
626,186 - MPMX26_00591 0.50 -0.0
626,192 - MPMX26_00591 0.51 +0.7
626,192 - MPMX26_00591 0.51 -0.1
626,197 - MPMX26_00591 0.52 +0.5
626,197 - MPMX26_00591 0.52 +0.4
626,229 - MPMX26_00591 0.57 +0.9
626,229 - MPMX26_00591 0.57 +0.2
626,229 - MPMX26_00591 0.57 +1.3
626,229 - MPMX26_00591 0.57 +1.0
626,229 - MPMX26_00591 0.57 -0.7
626,239 - MPMX26_00591 0.59 +0.1
626,239 - MPMX26_00591 0.59 +0.3
626,239 - MPMX26_00591 0.59 +0.6
626,239 - MPMX26_00591 0.59 -1.1
626,239 - MPMX26_00591 0.59 -0.0
626,239 - MPMX26_00591 0.59 +0.1
626,239 - MPMX26_00591 0.59 +1.3
626,239 - MPMX26_00591 0.59 -0.4
626,239 - MPMX26_00591 0.59 +0.1
626,239 - MPMX26_00591 0.59 +0.0
626,241 - MPMX26_00591 0.59 +1.9
626,241 - MPMX26_00591 0.59 +0.9
626,241 - MPMX26_00591 0.59 +1.3
626,241 - MPMX26_00591 0.59 +1.1
626,241 - MPMX26_00591 0.59 -1.4
626,241 - MPMX26_00591 0.59 +0.9
626,309 - MPMX26_00591 0.69 -0.1
626,309 - MPMX26_00591 0.69 +0.3
626,309 - MPMX26_00591 0.69 +0.9
626,330 - MPMX26_00591 0.72 +0.0
626,353 - MPMX26_00591 0.76 -0.2
626,360 - MPMX26_00591 0.77 +0.3
626,371 - MPMX26_00591 0.79 +0.1
626,371 - MPMX26_00591 0.79 +0.2
626,371 - MPMX26_00591 0.79 +0.6
626,371 - MPMX26_00591 0.79 +0.5
626,377 - MPMX26_00591 0.80 -0.1
626,377 - MPMX26_00591 0.80 -0.2
626,377 - MPMX26_00591 0.80 -0.1
626,377 - MPMX26_00591 0.80 -1.0
626,396 - MPMX26_00591 0.83 -0.1
626,443 - MPMX26_00591 0.90 -3.1
626,443 - MPMX26_00591 0.90 +0.7
626,443 - MPMX26_00591 0.90 +0.6
626,453 - -0.9
626,476 - -0.4
626,483 - +0.7
626,483 - -0.5
626,483 - -0.2
626,491 - +0.1

Or see this region's nucleotide sequence