Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00524 and MPMX26_00525 are separated by 21 nucleotides MPMX26_00525 and MPMX26_00526 are separated by 22 nucleotides MPMX26_00526 and MPMX26_00527 are separated by 97 nucleotides
MPMX26_00524: MPMX26_00524 - hypothetical protein, at 554,919 to 555,563
_00524
MPMX26_00525: MPMX26_00525 - hypothetical protein, at 555,585 to 556,775
_00525
MPMX26_00526: MPMX26_00526 - hypothetical protein, at 556,798 to 556,893
_00526
MPMX26_00527: MPMX26_00527 - hypothetical protein, at 556,991 to 557,935
_00527
Position (kb) 555
556
557 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 554.685 kb on - strand at 554.685 kb on - strand at 554.685 kb on - strand at 554.685 kb on - strand at 555.338 kb on - strand, within MPMX26_00524 at 555.606 kb on - strand at 555.824 kb on - strand, within MPMX26_00525 at 555.824 kb on - strand, within MPMX26_00525 at 555.824 kb on - strand, within MPMX26_00525 at 555.824 kb on - strand, within MPMX26_00525 at 555.836 kb on - strand, within MPMX26_00525 at 555.962 kb on - strand, within MPMX26_00525 at 555.962 kb on - strand, within MPMX26_00525 at 555.962 kb on - strand, within MPMX26_00525 at 556.070 kb on - strand, within MPMX26_00525 at 556.098 kb on - strand, within MPMX26_00525 at 556.098 kb on - strand, within MPMX26_00525 at 556.098 kb on - strand, within MPMX26_00525 at 556.136 kb on - strand, within MPMX26_00525 at 556.136 kb on - strand, within MPMX26_00525 at 556.151 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.218 kb on - strand, within MPMX26_00525 at 556.251 kb on - strand, within MPMX26_00525 at 556.259 kb on - strand, within MPMX26_00525 at 556.259 kb on - strand, within MPMX26_00525 at 556.371 kb on - strand, within MPMX26_00525 at 556.407 kb on - strand, within MPMX26_00525 at 556.440 kb on - strand, within MPMX26_00525 at 556.454 kb on - strand, within MPMX26_00525 at 556.454 kb on - strand, within MPMX26_00525 at 556.454 kb on - strand, within MPMX26_00525 at 556.454 kb on - strand, within MPMX26_00525 at 556.470 kb on - strand, within MPMX26_00525 at 556.605 kb on - strand, within MPMX26_00525 at 556.605 kb on - strand, within MPMX26_00525 at 556.605 kb on - strand, within MPMX26_00525 at 556.605 kb on - strand, within MPMX26_00525 at 556.605 kb on - strand, within MPMX26_00525 at 556.628 kb on - strand, within MPMX26_00525 at 556.638 kb on - strand, within MPMX26_00525 at 556.643 kb on - strand, within MPMX26_00525 at 556.643 kb on - strand, within MPMX26_00525 at 556.674 kb on - strand at 556.705 kb on - strand at 556.707 kb on - strand at 556.707 kb on - strand at 556.707 kb on - strand at 556.737 kb on - strand at 556.737 kb on - strand at 556.737 kb on - strand at 556.737 kb on - strand at 556.739 kb on - strand at 556.742 kb on - strand at 556.749 kb on - strand at 556.749 kb on - strand at 556.749 kb on - strand at 556.749 kb on - strand at 556.749 kb on - strand at 556.749 kb on - strand at 556.754 kb on - strand at 556.773 kb on - strand at 557.435 kb on - strand, within MPMX26_00527 at 557.598 kb on - strand, within MPMX26_00527
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 554,685 - +0.0 554,685 - -0.2 554,685 - -0.1 554,685 - -0.8 555,338 - MPMX26_00524 0.65 +0.5 555,606 - -1.1 555,824 - MPMX26_00525 0.20 -0.3 555,824 - MPMX26_00525 0.20 -0.2 555,824 - MPMX26_00525 0.20 +1.1 555,824 - MPMX26_00525 0.20 +1.3 555,836 - MPMX26_00525 0.21 -0.2 555,962 - MPMX26_00525 0.32 -0.6 555,962 - MPMX26_00525 0.32 -1.0 555,962 - MPMX26_00525 0.32 -0.5 556,070 - MPMX26_00525 0.41 +0.1 556,098 - MPMX26_00525 0.43 -0.6 556,098 - MPMX26_00525 0.43 -1.0 556,098 - MPMX26_00525 0.43 +0.0 556,136 - MPMX26_00525 0.46 -0.2 556,136 - MPMX26_00525 0.46 +0.1 556,151 - MPMX26_00525 0.48 -0.1 556,218 - MPMX26_00525 0.53 +0.4 556,218 - MPMX26_00525 0.53 -0.5 556,218 - MPMX26_00525 0.53 -0.0 556,218 - MPMX26_00525 0.53 -0.7 556,218 - MPMX26_00525 0.53 -2.9 556,218 - MPMX26_00525 0.53 +0.9 556,218 - MPMX26_00525 0.53 +1.5 556,218 - MPMX26_00525 0.53 -0.1 556,251 - MPMX26_00525 0.56 +0.2 556,259 - MPMX26_00525 0.57 +0.4 556,259 - MPMX26_00525 0.57 -0.4 556,371 - MPMX26_00525 0.66 +0.3 556,407 - MPMX26_00525 0.69 -0.7 556,440 - MPMX26_00525 0.72 -0.8 556,454 - MPMX26_00525 0.73 +0.4 556,454 - MPMX26_00525 0.73 +0.2 556,454 - MPMX26_00525 0.73 -0.2 556,454 - MPMX26_00525 0.73 +0.2 556,470 - MPMX26_00525 0.74 -0.7 556,605 - MPMX26_00525 0.86 -0.4 556,605 - MPMX26_00525 0.86 -1.1 556,605 - MPMX26_00525 0.86 +0.8 556,605 - MPMX26_00525 0.86 +0.3 556,605 - MPMX26_00525 0.86 -0.0 556,628 - MPMX26_00525 0.88 -0.4 556,638 - MPMX26_00525 0.88 -1.3 556,643 - MPMX26_00525 0.89 -0.2 556,643 - MPMX26_00525 0.89 -0.5 556,674 - -0.7 556,705 - -0.5 556,707 - +1.3 556,707 - +1.2 556,707 - -0.3 556,737 - -0.6 556,737 - -0.6 556,737 - +1.1 556,737 - +1.2 556,739 - -0.4 556,742 - +0.1 556,749 - +0.3 556,749 - +0.3 556,749 - -0.7 556,749 - -0.2 556,749 - -0.9 556,749 - -0.2 556,754 - +1.3 556,773 - -0.6 557,435 - MPMX26_00527 0.47 +0.5 557,598 - MPMX26_00527 0.64 +0.5
Or see this region's nucleotide sequence