Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00383

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00381 and MPMX26_00382 are separated by 53 nucleotidesMPMX26_00382 and MPMX26_00383 are separated by 121 nucleotidesMPMX26_00383 and MPMX26_00384 are separated by 119 nucleotides MPMX26_00381: MPMX26_00381 - Biopolymer transport protein ExbD, at 411,841 to 412,245 _00381 MPMX26_00382: MPMX26_00382 - Peptide methionine sulfoxide reductase MsrA, at 412,299 to 412,823 _00382 MPMX26_00383: MPMX26_00383 - hypothetical protein, at 412,945 to 413,415 _00383 MPMX26_00384: MPMX26_00384 - hypothetical protein, at 413,535 to 414,590 _00384 Position (kb) 412 413 414Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 412.376 kb on - strand, within MPMX26_00382at 412.454 kb on - strand, within MPMX26_00382at 412.469 kb on - strand, within MPMX26_00382at 412.469 kb on - strand, within MPMX26_00382at 412.469 kb on - strand, within MPMX26_00382at 412.469 kb on - strand, within MPMX26_00382at 412.470 kb on - strand, within MPMX26_00382at 412.475 kb on - strand, within MPMX26_00382at 412.476 kb on - strand, within MPMX26_00382at 412.482 kb on - strand, within MPMX26_00382at 412.482 kb on - strand, within MPMX26_00382at 412.504 kb on - strand, within MPMX26_00382at 412.548 kb on - strand, within MPMX26_00382at 412.548 kb on - strand, within MPMX26_00382at 412.548 kb on - strand, within MPMX26_00382at 412.550 kb on - strand, within MPMX26_00382at 412.555 kb on - strand, within MPMX26_00382at 412.560 kb on - strand, within MPMX26_00382at 412.574 kb on - strand, within MPMX26_00382at 412.583 kb on - strand, within MPMX26_00382at 412.583 kb on - strand, within MPMX26_00382at 412.583 kb on - strand, within MPMX26_00382at 412.583 kb on - strand, within MPMX26_00382at 412.635 kb on - strand, within MPMX26_00382at 412.640 kb on - strand, within MPMX26_00382at 412.656 kb on - strand, within MPMX26_00382at 412.734 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.764 kb on - strand, within MPMX26_00382at 412.794 kb on - strandat 412.823 kb on - strandat 412.995 kb on - strand, within MPMX26_00383at 413.036 kb on - strand, within MPMX26_00383at 413.041 kb on - strand, within MPMX26_00383at 413.047 kb on - strand, within MPMX26_00383at 413.064 kb on - strand, within MPMX26_00383at 413.064 kb on - strand, within MPMX26_00383at 413.064 kb on - strand, within MPMX26_00383at 413.106 kb on - strand, within MPMX26_00383at 413.115 kb on - strand, within MPMX26_00383at 413.156 kb on - strand, within MPMX26_00383at 413.186 kb on - strand, within MPMX26_00383at 413.223 kb on - strand, within MPMX26_00383at 413.227 kb on - strand, within MPMX26_00383at 413.229 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.238 kb on - strand, within MPMX26_00383at 413.332 kb on - strand, within MPMX26_00383at 413.338 kb on - strand, within MPMX26_00383at 413.338 kb on - strand, within MPMX26_00383at 413.338 kb on - strand, within MPMX26_00383at 413.343 kb on - strand, within MPMX26_00383at 413.348 kb on - strand, within MPMX26_00383at 413.353 kb on - strand, within MPMX26_00383at 413.373 kb on - strandat 413.373 kb on - strandat 413.383 kb on - strandat 413.388 kb on - strandat 413.388 kb on - strandat 413.558 kb on - strandat 413.559 kb on - strandat 413.559 kb on - strandat 413.559 kb on - strandat 413.588 kb on - strandat 413.615 kb on - strandat 413.615 kb on - strandat 413.615 kb on - strandat 413.615 kb on - strandat 413.615 kb on - strandat 413.615 kb on - strandat 413.804 kb on - strand, within MPMX26_00384at 413.811 kb on - strand, within MPMX26_00384at 413.811 kb on - strand, within MPMX26_00384at 413.811 kb on - strand, within MPMX26_00384at 413.811 kb on - strand, within MPMX26_00384at 413.811 kb on - strand, within MPMX26_00384at 413.812 kb on - strand, within MPMX26_00384at 413.812 kb on - strand, within MPMX26_00384at 413.812 kb on - strand, within MPMX26_00384at 413.822 kb on - strand, within MPMX26_00384at 413.831 kb on - strand, within MPMX26_00384at 413.982 kb on - strand, within MPMX26_00384at 414.012 kb on - strand, within MPMX26_00384at 414.126 kb on - strand, within MPMX26_00384at 414.185 kb on - strand, within MPMX26_00384at 414.185 kb on - strand, within MPMX26_00384at 414.228 kb on - strand, within MPMX26_00384at 414.236 kb on - strand, within MPMX26_00384at 414.316 kb on - strand, within MPMX26_00384at 414.316 kb on - strand, within MPMX26_00384at 414.316 kb on - strand, within MPMX26_00384at 414.319 kb on - strand, within MPMX26_00384at 414.324 kb on - strand, within MPMX26_00384at 414.324 kb on - strand, within MPMX26_00384at 414.324 kb on - strand, within MPMX26_00384

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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412,376 - MPMX26_00382 0.15 -0.6
412,454 - MPMX26_00382 0.30 -0.0
412,469 - MPMX26_00382 0.32 -0.1
412,469 - MPMX26_00382 0.32 +0.1
412,469 - MPMX26_00382 0.32 -0.3
412,469 - MPMX26_00382 0.32 -0.4
412,470 - MPMX26_00382 0.33 +0.2
412,475 - MPMX26_00382 0.34 +0.1
412,476 - MPMX26_00382 0.34 +0.3
412,482 - MPMX26_00382 0.35 -0.4
412,482 - MPMX26_00382 0.35 +0.3
412,504 - MPMX26_00382 0.39 +0.4
412,548 - MPMX26_00382 0.47 -0.1
412,548 - MPMX26_00382 0.47 -1.2
412,548 - MPMX26_00382 0.47 -0.3
412,550 - MPMX26_00382 0.48 -1.3
412,555 - MPMX26_00382 0.49 -0.3
412,560 - MPMX26_00382 0.50 -1.4
412,574 - MPMX26_00382 0.52 +0.2
412,583 - MPMX26_00382 0.54 -0.3
412,583 - MPMX26_00382 0.54 +0.7
412,583 - MPMX26_00382 0.54 +0.6
412,583 - MPMX26_00382 0.54 -0.9
412,635 - MPMX26_00382 0.64 -0.1
412,640 - MPMX26_00382 0.65 -0.2
412,656 - MPMX26_00382 0.68 -0.2
412,734 - MPMX26_00382 0.83 -1.8
412,764 - MPMX26_00382 0.89 +1.1
412,764 - MPMX26_00382 0.89 -0.2
412,764 - MPMX26_00382 0.89 +0.5
412,764 - MPMX26_00382 0.89 -0.3
412,764 - MPMX26_00382 0.89 -2.8
412,764 - MPMX26_00382 0.89 -1.2
412,794 - +1.6
412,823 - +0.4
412,995 - MPMX26_00383 0.11 +0.5
413,036 - MPMX26_00383 0.19 +0.8
413,041 - MPMX26_00383 0.20 +0.1
413,047 - MPMX26_00383 0.22 +0.5
413,064 - MPMX26_00383 0.25 +1.9
413,064 - MPMX26_00383 0.25 +0.5
413,064 - MPMX26_00383 0.25 +0.7
413,106 - MPMX26_00383 0.34 +0.4
413,115 - MPMX26_00383 0.36 +0.3
413,156 - MPMX26_00383 0.45 +0.9
413,186 - MPMX26_00383 0.51 +0.7
413,223 - MPMX26_00383 0.59 +0.5
413,227 - MPMX26_00383 0.60 +0.2
413,229 - MPMX26_00383 0.60 -0.8
413,238 - MPMX26_00383 0.62 +0.0
413,238 - MPMX26_00383 0.62 -0.2
413,238 - MPMX26_00383 0.62 -0.2
413,238 - MPMX26_00383 0.62 +0.9
413,238 - MPMX26_00383 0.62 -0.0
413,238 - MPMX26_00383 0.62 +0.4
413,238 - MPMX26_00383 0.62 -0.1
413,238 - MPMX26_00383 0.62 -0.0
413,238 - MPMX26_00383 0.62 -0.6
413,238 - MPMX26_00383 0.62 +0.2
413,238 - MPMX26_00383 0.62 +0.7
413,238 - MPMX26_00383 0.62 -0.1
413,238 - MPMX26_00383 0.62 +0.4
413,238 - MPMX26_00383 0.62 -0.2
413,238 - MPMX26_00383 0.62 -0.8
413,332 - MPMX26_00383 0.82 +0.2
413,338 - MPMX26_00383 0.83 +0.2
413,338 - MPMX26_00383 0.83 +0.2
413,338 - MPMX26_00383 0.83 +0.4
413,343 - MPMX26_00383 0.85 -1.1
413,348 - MPMX26_00383 0.86 +1.3
413,353 - MPMX26_00383 0.87 +0.6
413,373 - -0.1
413,373 - -0.0
413,383 - +0.4
413,388 - +0.4
413,388 - -0.2
413,558 - +1.0
413,559 - +3.5
413,559 - +0.7
413,559 - -1.3
413,588 - +0.6
413,615 - +1.1
413,615 - -2.1
413,615 - -0.4
413,615 - -0.9
413,615 - -0.8
413,615 - +0.4
413,804 - MPMX26_00384 0.25 -0.6
413,811 - MPMX26_00384 0.26 +0.2
413,811 - MPMX26_00384 0.26 +0.9
413,811 - MPMX26_00384 0.26 +0.1
413,811 - MPMX26_00384 0.26 -0.8
413,811 - MPMX26_00384 0.26 +0.6
413,812 - MPMX26_00384 0.26 +0.4
413,812 - MPMX26_00384 0.26 -1.0
413,812 - MPMX26_00384 0.26 +0.7
413,822 - MPMX26_00384 0.27 -1.3
413,831 - MPMX26_00384 0.28 +0.3
413,982 - MPMX26_00384 0.42 +1.7
414,012 - MPMX26_00384 0.45 -0.4
414,126 - MPMX26_00384 0.56 +0.1
414,185 - MPMX26_00384 0.62 -0.5
414,185 - MPMX26_00384 0.62 +0.8
414,228 - MPMX26_00384 0.66 -0.3
414,236 - MPMX26_00384 0.66 +1.3
414,316 - MPMX26_00384 0.74 +1.3
414,316 - MPMX26_00384 0.74 +0.5
414,316 - MPMX26_00384 0.74 -0.6
414,319 - MPMX26_00384 0.74 -0.0
414,324 - MPMX26_00384 0.75 -0.1
414,324 - MPMX26_00384 0.75 -0.6
414,324 - MPMX26_00384 0.75 +0.1

Or see this region's nucleotide sequence