Strain Fitness in Escherichia coli ECRC98 around JDDGAC_09950

Experiment: Control_ECRC98_WM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Control_ECRC98_WM
1,774,618	+	ybhS	JDDGAC_09945	0.21	+0.4
1,774,619	-	ybhS	JDDGAC_09945	0.21	-1.7
1,774,698	+	ybhS	JDDGAC_09945	0.28	-0.2
1,774,804	+	ybhS	JDDGAC_09945	0.37	-0.4
1,774,805	-	ybhS	JDDGAC_09945	0.37	+0.3
1,774,883	+	ybhS	JDDGAC_09945	0.44	-0.9
1,774,884	-	ybhS	JDDGAC_09945	0.44	+0.2
1,775,087	-	ybhS	JDDGAC_09945	0.62	+0.5
1,775,087	-	ybhS	JDDGAC_09945	0.62	-1.1
1,775,118	+	ybhS	JDDGAC_09945	0.65	-0.3
1,775,118	+	ybhS	JDDGAC_09945	0.65	+0.2
1,775,118	+	ybhS	JDDGAC_09945	0.65	+2.2
1,775,137	-	ybhS	JDDGAC_09945	0.66	+0.1
1,775,360	-	ybhS	JDDGAC_09945	0.86	-0.1
1,775,377	+	ybhS	JDDGAC_09945	0.88	-0.8
1,775,418	+				-1.0
1,775,444	+				+0.0
1,775,516	-				+3.3
1,775,542	-				-0.7
1,775,815	-	ybhR	JDDGAC_09950	0.26	-0.3
1,775,817	+	ybhR	JDDGAC_09950	0.26	-0.4
1,775,818	-	ybhR	JDDGAC_09950	0.26	+0.5
1,775,931	-	ybhR	JDDGAC_09950	0.36	-0.3
1,775,989	+	ybhR	JDDGAC_09950	0.42	+0.3
1,776,136	+	ybhR	JDDGAC_09950	0.55	-0.3
1,776,261	-	ybhR	JDDGAC_09950	0.66	+0.4
1,776,314	+	ybhR	JDDGAC_09950	0.71	+0.0
1,776,400	+	ybhR	JDDGAC_09950	0.79	-1.4
1,776,481	+	ybhR	JDDGAC_09950	0.86	+1.0
1,776,488	-	ybhR	JDDGAC_09950	0.87	-0.9
1,776,499	+	ybhR	JDDGAC_09950	0.88	+1.0
1,776,508	+	ybhR	JDDGAC_09950	0.89	-1.4
1,776,557	-				-1.6
1,776,663	-	ybhQ	JDDGAC_09955	0.16	+0.3
1,776,852	-	ybhQ	JDDGAC_09955	0.62	-1.3
1,776,876	-	ybhQ	JDDGAC_09955	0.68	-0.7
1,776,952	+	ybhQ	JDDGAC_09955	0.87	-1.1
1,777,027	+				-0.3
1,777,028	-				+0.4
1,777,033	+				+1.6
1,777,099	-				-0.0
1,777,103	+				-0.1
1,777,104	-				-1.6
1,777,104	-				-0.5
1,777,116	+				-0.6
1,777,116	+				-0.8
1,777,117	-				+0.4
1,777,117	-				+0.1
1,777,117	-				+0.5
1,777,366	+	ybhP	JDDGAC_09960	0.30	+1.2
1,777,367	-	ybhP	JDDGAC_09960	0.30	-0.5
1,777,401	+	ybhP	JDDGAC_09960	0.34	+0.8
1,777,457	+	ybhP	JDDGAC_09960	0.42	-0.1
1,777,509	-	ybhP	JDDGAC_09960	0.49	+0.9
1,777,560	+	ybhP	JDDGAC_09960	0.55	-0.9