Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02448

Experiment: TSB with Dermcidin 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 2 ug/mL
2,530,281	+		MPMX26_02446	0.33	-0.0
2,530,304	+		MPMX26_02446	0.36	-0.8
2,530,402	+		MPMX26_02446	0.52	+0.1
2,530,498	+		MPMX26_02446	0.68	+1.3
2,530,510	+		MPMX26_02446	0.70	+0.6
2,530,537	+		MPMX26_02446	0.74	-0.2
2,530,592	+		MPMX26_02446	0.83	-0.4
2,530,667	+				+1.3
2,530,673	+				-0.5
2,530,678	+				+0.1
2,530,678	+				-0.2
2,530,734	+				+0.2
2,530,829	+		MPMX26_02447	0.21	-0.3
2,530,839	+		MPMX26_02447	0.25	+0.1
2,530,897	+		MPMX26_02447	0.47	+0.3
2,530,993	+		MPMX26_02447	0.82	-0.1
2,531,055	+				-0.8
2,531,238	+				-0.6
2,531,265	+				-1.7
2,531,292	+				-0.1
2,531,300	+				-0.6
2,531,308	+				-0.4
2,531,314	+				+0.2
2,531,314	+				+0.1
2,531,314	+				+0.8
2,531,314	+				+0.7
2,531,346	+				-1.1
2,531,359	+		MPMX26_02448	0.10	-2.9
2,531,361	+		MPMX26_02448	0.10	+1.9
2,531,489	+		MPMX26_02448	0.27	+0.3
2,531,494	+		MPMX26_02448	0.27	-0.3
2,531,499	+		MPMX26_02448	0.28	-0.6
2,531,499	+		MPMX26_02448	0.28	-1.8
2,531,499	+		MPMX26_02448	0.28	-0.5
2,531,499	+		MPMX26_02448	0.28	-0.5
2,531,499	+		MPMX26_02448	0.28	+0.0
2,531,513	+		MPMX26_02448	0.30	-0.4
2,531,528	+		MPMX26_02448	0.32	-1.3
2,531,528	+		MPMX26_02448	0.32	-0.6
2,531,547	+		MPMX26_02448	0.34	-0.7
2,531,547	+		MPMX26_02448	0.34	-0.7
2,531,547	+		MPMX26_02448	0.34	-0.7
2,531,547	+		MPMX26_02448	0.34	-0.0
2,531,547	+		MPMX26_02448	0.34	-1.3
2,531,547	+		MPMX26_02448	0.34	-0.7
2,531,553	+		MPMX26_02448	0.35	-0.3
2,531,563	+		MPMX26_02448	0.36	+0.5
2,531,577	+		MPMX26_02448	0.38	-0.1
2,531,583	+		MPMX26_02448	0.39	+0.7
2,531,598	+		MPMX26_02448	0.40	+0.9
2,531,598	+		MPMX26_02448	0.40	-0.2
2,531,611	+		MPMX26_02448	0.42	-0.4
2,531,653	-		MPMX26_02448	0.47	+0.3
2,531,710	+		MPMX26_02448	0.55	+1.3
2,531,710	+		MPMX26_02448	0.55	-0.3
2,531,712	+		MPMX26_02448	0.55	+0.1
2,531,726	+		MPMX26_02448	0.57	+0.0
2,531,773	+		MPMX26_02448	0.62	-1.0
2,531,783	+		MPMX26_02448	0.64	-0.4
2,531,803	+		MPMX26_02448	0.66	-0.9
2,531,805	+		MPMX26_02448	0.67	-0.3
2,531,813	+		MPMX26_02448	0.68	-0.0
2,531,822	+		MPMX26_02448	0.69	-0.4
2,531,822	+		MPMX26_02448	0.69	-1.3
2,531,823	+		MPMX26_02448	0.69	-0.4
2,531,823	+		MPMX26_02448	0.69	-0.7
2,531,844	+		MPMX26_02448	0.71	-1.3
2,531,934	+		MPMX26_02448	0.83	-0.3
2,531,934	+		MPMX26_02448	0.83	-0.2
2,531,934	+		MPMX26_02448	0.83	-2.9
2,531,934	+		MPMX26_02448	0.83	+2.9
2,531,934	+		MPMX26_02448	0.83	-0.9
2,531,939	+		MPMX26_02448	0.83	+1.7
2,531,939	+		MPMX26_02448	0.83	-0.3
2,532,029	+				-0.1
2,532,029	+				+0.8
2,532,063	+				-2.5
2,532,107	+				+0.0
2,532,107	+				-0.1
2,532,117	+				-0.7
2,532,151	+		MPMX26_02449	0.14	+0.4
2,532,200	+		MPMX26_02449	0.23	+1.5
2,532,210	+		MPMX26_02449	0.24	-0.6
2,532,272	+		MPMX26_02449	0.35	-1.4
2,532,272	+		MPMX26_02449	0.35	-0.9
2,532,272	+		MPMX26_02449	0.35	+0.1
2,532,272	+		MPMX26_02449	0.35	-0.6
2,532,272	+		MPMX26_02449	0.35	+0.4
2,532,272	+		MPMX26_02449	0.35	-0.6
2,532,272	+		MPMX26_02449	0.35	-2.0
2,532,282	+		MPMX26_02449	0.37	-2.1
2,532,282	+		MPMX26_02449	0.37	-0.6
2,532,282	+		MPMX26_02449	0.37	+0.1
2,532,295	+		MPMX26_02449	0.39	-0.5
2,532,313	+		MPMX26_02449	0.42	-0.6
2,532,330	+		MPMX26_02449	0.45	-0.4
2,532,335	+		MPMX26_02449	0.46	+0.4
2,532,335	+		MPMX26_02449	0.46	-0.0
2,532,335	+		MPMX26_02449	0.46	+0.1
2,532,335	+		MPMX26_02449	0.46	+0.1
2,532,335	+		MPMX26_02449	0.46	-1.3
2,532,335	+		MPMX26_02449	0.46	-2.3
2,532,335	+		MPMX26_02449	0.46	-0.4
2,532,335	+		MPMX26_02449	0.46	-2.4
2,532,382	+		MPMX26_02449	0.53	-0.1
2,532,401	+		MPMX26_02449	0.57	+0.0
2,532,444	+		MPMX26_02449	0.64	+0.0
2,532,444	+		MPMX26_02449	0.64	+0.1
2,532,490	+		MPMX26_02449	0.72	-0.8
2,532,515	+		MPMX26_02449	0.76	-1.5
2,532,516	+		MPMX26_02449	0.76	-0.9
2,532,536	+		MPMX26_02449	0.80	-0.1
2,532,575	+		MPMX26_02449	0.86	+0.8
2,532,575	+		MPMX26_02449	0.86	-1.4
2,532,585	+		MPMX26_02449	0.88	-0.3
2,532,597	+		MPMX26_02449	0.90	-0.8
2,532,597	+		MPMX26_02449	0.90	-0.2
2,532,628	+				+0.2
2,532,645	+				-0.3
2,532,650	+				+0.5
2,532,650	+				-0.9
2,532,650	+				-0.5
2,532,650	+				+0.3
2,532,650	+				-0.2
2,532,650	+				+0.7
2,532,650	+				+0.2
2,532,650	+				-0.4
2,532,650	+				-1.1
2,532,650	+				+0.1
2,532,650	+				-1.9
2,532,650	+				-1.4
2,532,650	+				-0.3
2,532,650	+				-1.7
2,532,650	+				+0.3
2,532,650	+				-0.5
2,532,650	+				-0.0
2,532,650	+				-1.4
2,532,650	+				-0.7
2,532,650	+				-1.0
2,532,650	+				-0.6
2,532,687	+				+0.1
2,532,687	+				+0.1
2,532,687	+				-0.5
2,532,719	+				+0.0
2,532,719	+				-2.0
2,532,729	+				+0.7
2,532,735	+				-0.4
2,532,735	+				+0.2
2,532,753	+				+0.9
2,532,753	+				-0.6
2,532,786	+				-0.8
2,532,803	+		MPMX26_02450	0.12	-0.1
2,532,808	+		MPMX26_02450	0.12	-0.3
2,532,808	+		MPMX26_02450	0.12	-0.8
2,532,819	+		MPMX26_02450	0.13	-1.1
2,532,819	+		MPMX26_02450	0.13	-0.9
2,532,819	+		MPMX26_02450	0.13	-1.1
2,532,852	+		MPMX26_02450	0.17	-0.5
2,532,896	+		MPMX26_02450	0.22	-0.2
2,532,920	+		MPMX26_02450	0.25	-0.1
2,532,952	+		MPMX26_02450	0.28	-1.1
2,532,976	+		MPMX26_02450	0.31	-0.8
2,532,994	+		MPMX26_02450	0.33	+0.1
2,532,999	+		MPMX26_02450	0.33	-0.9
2,532,999	+		MPMX26_02450	0.33	-0.5
2,532,999	+		MPMX26_02450	0.33	-0.4
2,533,000	+		MPMX26_02450	0.33	+0.9
2,533,005	+		MPMX26_02450	0.34	-1.0
2,533,037	+		MPMX26_02450	0.37	+0.8
2,533,057	+		MPMX26_02450	0.40	-2.1