Experiment: TSB with Dermcidin 2 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02362 and MPMX26_02363 are separated by 123 nucleotides MPMX26_02363 and MPMX26_02364 are separated by 102 nucleotides MPMX26_02364 and MPMX26_02365 are separated by 93 nucleotides
MPMX26_02362: MPMX26_02362 - FK506-binding protein, at 2,445,206 to 2,445,547
_02362
MPMX26_02363: MPMX26_02363 - hypothetical protein, at 2,445,671 to 2,446,294
_02363
MPMX26_02364: MPMX26_02364 - putative protein YaeQ, at 2,446,397 to 2,446,927
_02364
MPMX26_02365: MPMX26_02365 - Zinc-binding GTPase YeiR, at 2,447,021 to 2,448,043
_02365
Position (kb)
2446
2447 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.470 kb on - strand, within MPMX26_02362 at 2445.479 kb on - strand, within MPMX26_02362 at 2445.479 kb on - strand, within MPMX26_02362 at 2445.479 kb on - strand, within MPMX26_02362 at 2446.136 kb on - strand, within MPMX26_02363 at 2446.427 kb on - strand at 2446.475 kb on - strand, within MPMX26_02364 at 2446.480 kb on - strand, within MPMX26_02364 at 2446.480 kb on - strand, within MPMX26_02364 at 2446.597 kb on - strand, within MPMX26_02364 at 2446.597 kb on - strand, within MPMX26_02364 at 2446.681 kb on - strand, within MPMX26_02364 at 2446.681 kb on - strand, within MPMX26_02364 at 2446.726 kb on - strand, within MPMX26_02364 at 2446.745 kb on - strand, within MPMX26_02364 at 2446.766 kb on - strand, within MPMX26_02364 at 2446.766 kb on - strand, within MPMX26_02364 at 2446.847 kb on - strand, within MPMX26_02364 at 2446.868 kb on - strand, within MPMX26_02364 at 2446.868 kb on - strand, within MPMX26_02364 at 2446.868 kb on - strand, within MPMX26_02364 at 2446.868 kb on - strand, within MPMX26_02364 at 2446.868 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.870 kb on - strand, within MPMX26_02364 at 2446.880 kb on - strand at 2446.895 kb on - strand at 2446.895 kb on - strand at 2446.895 kb on - strand at 2446.897 kb on - strand at 2446.897 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.907 kb on - strand at 2446.912 kb on - strand at 2447.054 kb on - strand at 2447.192 kb on - strand, within MPMX26_02365 at 2447.197 kb on - strand, within MPMX26_02365 at 2447.207 kb on - strand, within MPMX26_02365 at 2447.207 kb on - strand, within MPMX26_02365 at 2447.315 kb on - strand, within MPMX26_02365 at 2447.810 kb on - strand, within MPMX26_02365 at 2447.830 kb on - strand, within MPMX26_02365 at 2447.879 kb on - strand, within MPMX26_02365 at 2447.897 kb on - strand, within MPMX26_02365 at 2447.897 kb on - strand, within MPMX26_02365 at 2447.897 kb on - strand, within MPMX26_02365
Per-strain Table
Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL remove 2,445,470 - MPMX26_02362 0.77 -0.6 2,445,470 - MPMX26_02362 0.77 +0.2 2,445,470 - MPMX26_02362 0.77 -0.4 2,445,470 - MPMX26_02362 0.77 +1.5 2,445,470 - MPMX26_02362 0.77 -0.0 2,445,470 - MPMX26_02362 0.77 -1.0 2,445,470 - MPMX26_02362 0.77 -0.1 2,445,470 - MPMX26_02362 0.77 -1.0 2,445,479 - MPMX26_02362 0.80 -0.5 2,445,479 - MPMX26_02362 0.80 +0.5 2,445,479 - MPMX26_02362 0.80 -0.5 2,446,136 - MPMX26_02363 0.75 +2.9 2,446,427 - -0.5 2,446,475 - MPMX26_02364 0.15 -0.7 2,446,480 - MPMX26_02364 0.16 +0.3 2,446,480 - MPMX26_02364 0.16 -0.1 2,446,597 - MPMX26_02364 0.38 -1.4 2,446,597 - MPMX26_02364 0.38 -0.0 2,446,681 - MPMX26_02364 0.53 -0.3 2,446,681 - MPMX26_02364 0.53 +0.3 2,446,726 - MPMX26_02364 0.62 -2.4 2,446,745 - MPMX26_02364 0.66 +0.4 2,446,766 - MPMX26_02364 0.69 -1.7 2,446,766 - MPMX26_02364 0.69 -0.6 2,446,847 - MPMX26_02364 0.85 +0.0 2,446,868 - MPMX26_02364 0.89 -1.2 2,446,868 - MPMX26_02364 0.89 -2.1 2,446,868 - MPMX26_02364 0.89 -1.1 2,446,868 - MPMX26_02364 0.89 +0.9 2,446,868 - MPMX26_02364 0.89 -0.3 2,446,870 - MPMX26_02364 0.89 -1.2 2,446,870 - MPMX26_02364 0.89 -0.4 2,446,870 - MPMX26_02364 0.89 -0.5 2,446,870 - MPMX26_02364 0.89 -0.3 2,446,870 - MPMX26_02364 0.89 +0.0 2,446,870 - MPMX26_02364 0.89 -0.4 2,446,870 - MPMX26_02364 0.89 +0.5 2,446,870 - MPMX26_02364 0.89 -0.2 2,446,870 - MPMX26_02364 0.89 -0.7 2,446,870 - MPMX26_02364 0.89 -0.7 2,446,880 - -0.6 2,446,895 - +0.4 2,446,895 - -0.2 2,446,895 - -0.7 2,446,897 - -0.2 2,446,897 - -0.3 2,446,907 - -0.3 2,446,907 - +0.0 2,446,907 - +0.0 2,446,907 - +1.9 2,446,907 - +0.2 2,446,907 - +0.1 2,446,907 - +0.2 2,446,907 - +0.0 2,446,907 - +0.4 2,446,907 - -0.7 2,446,907 - +1.9 2,446,912 - -0.5 2,447,054 - -1.1 2,447,192 - MPMX26_02365 0.17 -0.5 2,447,197 - MPMX26_02365 0.17 -1.7 2,447,207 - MPMX26_02365 0.18 +1.7 2,447,207 - MPMX26_02365 0.18 -0.6 2,447,315 - MPMX26_02365 0.29 -0.8 2,447,810 - MPMX26_02365 0.77 +0.8 2,447,830 - MPMX26_02365 0.79 -0.1 2,447,879 - MPMX26_02365 0.84 +0.3 2,447,897 - MPMX26_02365 0.86 +1.6 2,447,897 - MPMX26_02365 0.86 +0.6 2,447,897 - MPMX26_02365 0.86 +0.6
Or see this region's nucleotide sequence