Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01996

Experiment: TSB with Dermcidin 2 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	TSB with Dermcidin 2 ug/mL
2,054,471	+		MPMX26_01995	0.55	-0.4
2,054,471	+		MPMX26_01995	0.55	+0.4
2,054,476	+		MPMX26_01995	0.56	+1.5
2,054,531	+		MPMX26_01995	0.59	+0.3
2,054,602	+		MPMX26_01995	0.62	+1.6
2,054,832	-		MPMX26_01995	0.75	-0.8
2,054,987	+		MPMX26_01995	0.83	+1.5
2,054,987	+		MPMX26_01995	0.83	-1.8
2,054,992	+		MPMX26_01995	0.83	-0.1
2,054,992	+		MPMX26_01995	0.83	-0.7
2,054,992	+		MPMX26_01995	0.83	+0.9
2,055,094	+		MPMX26_01995	0.89	+0.9
2,055,469	-				-0.1
2,055,532	-				-1.7
2,055,542	-				-0.6
2,055,542	-				-1.5
2,055,565	-				-1.6
2,055,567	-				+0.4
2,055,604	-		MPMX26_01996	0.12	-0.7
2,055,651	-		MPMX26_01996	0.15	+0.2
2,055,677	-		MPMX26_01996	0.17	+1.3
2,055,716	-		MPMX26_01996	0.20	+0.9
2,055,738	-		MPMX26_01996	0.22	-2.4
2,055,754	-		MPMX26_01996	0.23	+1.3
2,055,759	-		MPMX26_01996	0.24	-1.1
2,055,760	-		MPMX26_01996	0.24	-1.3
2,055,812	-		MPMX26_01996	0.28	-3.0
2,055,812	-		MPMX26_01996	0.28	-0.4
2,055,831	-		MPMX26_01996	0.29	-0.1
2,055,858	-		MPMX26_01996	0.32	+1.3
2,055,868	-		MPMX26_01996	0.32	-0.5
2,055,868	-		MPMX26_01996	0.32	-1.7
2,055,885	-		MPMX26_01996	0.34	-1.2
2,055,885	-		MPMX26_01996	0.34	-1.1
2,055,886	-		MPMX26_01996	0.34	-0.7
2,055,909	-		MPMX26_01996	0.36	-1.3
2,055,917	-		MPMX26_01996	0.36	+0.9
2,055,956	-		MPMX26_01996	0.39	+0.9
2,055,993	-		MPMX26_01996	0.42	-3.0
2,056,015	-		MPMX26_01996	0.44	-0.9
2,056,045	-		MPMX26_01996	0.46	+0.3
2,056,050	-		MPMX26_01996	0.47	-1.0
2,056,057	-		MPMX26_01996	0.47	-0.3
2,056,065	-		MPMX26_01996	0.48	-0.9
2,056,065	-		MPMX26_01996	0.48	-1.0
2,056,129	-		MPMX26_01996	0.53	-1.1
2,056,146	-		MPMX26_01996	0.54	-0.5
2,056,153	-		MPMX26_01996	0.55	-0.8
2,056,176	-		MPMX26_01996	0.57	-1.9
2,056,177	-		MPMX26_01996	0.57	-1.4
2,056,216	-		MPMX26_01996	0.60	+0.1
2,056,216	-		MPMX26_01996	0.60	+0.1
2,056,216	-		MPMX26_01996	0.60	-2.8
2,056,216	-		MPMX26_01996	0.60	-0.4
2,056,216	-		MPMX26_01996	0.60	-1.3
2,056,216	-		MPMX26_01996	0.60	-0.7
2,056,216	-		MPMX26_01996	0.60	-2.0
2,056,216	-		MPMX26_01996	0.60	-0.9
2,056,216	-		MPMX26_01996	0.60	+0.7
2,056,249	-		MPMX26_01996	0.62	-0.7
2,056,254	-		MPMX26_01996	0.63	-1.8
2,056,254	-		MPMX26_01996	0.63	-0.3
2,056,331	-		MPMX26_01996	0.69	+0.4
2,056,358	-		MPMX26_01996	0.71	+0.9
2,056,369	-		MPMX26_01996	0.72	-1.5
2,056,425	-		MPMX26_01996	0.76	+1.7
2,056,425	-		MPMX26_01996	0.76	-0.9
2,056,484	-		MPMX26_01996	0.81	+0.3
2,056,529	-		MPMX26_01996	0.84	+1.3
2,056,543	-		MPMX26_01996	0.85	-1.8
2,056,577	-		MPMX26_01996	0.88	-0.2
2,056,592	-		MPMX26_01996	0.89	+1.7
2,056,675	-				-0.4
2,056,867	-				+1.1
2,056,871	-				-1.3
2,056,938	-				-1.1
2,056,938	-				-0.3
2,056,961	-				-0.8
2,056,961	-				-0.2
2,056,961	-				+0.3
2,056,961	-				+1.3
2,056,961	-				-0.3
2,056,961	-				+0.3
2,056,961	-				-1.2
2,056,961	-				-0.1
2,056,961	-				+0.7
2,056,975	-				-1.4
2,056,975	-				+0.0
2,056,985	-				-0.2
2,056,985	-				-1.3
2,057,004	-				-0.9
2,057,014	-				-0.2
2,057,019	-				-1.4
2,057,019	-				+1.0
2,057,019	-				+2.3
2,057,019	-				-0.1
2,057,019	-				-0.3
2,057,042	-		MPMX26_01997	0.11	-1.4
2,057,042	-		MPMX26_01997	0.11	-0.1
2,057,061	-		MPMX26_01997	0.12	-0.0
2,057,071	-		MPMX26_01997	0.13	-1.2
2,057,071	-		MPMX26_01997	0.13	-0.8
2,057,073	-		MPMX26_01997	0.13	-1.5
2,057,083	-		MPMX26_01997	0.14	-1.2
2,057,105	-		MPMX26_01997	0.15	-2.2
2,057,105	-		MPMX26_01997	0.15	+0.3
2,057,252	-		MPMX26_01997	0.26	-0.3
2,057,277	-		MPMX26_01997	0.27	-1.1
2,057,307	-		MPMX26_01997	0.29	-0.7
2,057,381	-		MPMX26_01997	0.35	-0.3
2,057,391	-		MPMX26_01997	0.35	-1.3
2,057,392	-		MPMX26_01997	0.35	+0.6
2,057,392	-		MPMX26_01997	0.35	-0.5
2,057,419	-		MPMX26_01997	0.37	+1.3
2,057,444	-		MPMX26_01997	0.39	-0.8
2,057,480	-		MPMX26_01997	0.41	+0.1
2,057,480	-		MPMX26_01997	0.41	-0.9
2,057,480	-		MPMX26_01997	0.41	-0.7
2,057,480	-		MPMX26_01997	0.41	-0.6
2,057,480	-		MPMX26_01997	0.41	-2.1
2,057,480	-		MPMX26_01997	0.41	-0.5
2,057,480	-		MPMX26_01997	0.41	-0.8
2,057,480	-		MPMX26_01997	0.41	-0.5
2,057,509	-		MPMX26_01997	0.43	-2.1
2,057,530	-		MPMX26_01997	0.45	+1.6
2,057,530	-		MPMX26_01997	0.45	-1.0
2,057,530	-		MPMX26_01997	0.45	-1.7
2,057,530	-		MPMX26_01997	0.45	-1.1
2,057,531	-		MPMX26_01997	0.45	-0.5
2,057,613	-		MPMX26_01997	0.51	-1.5
2,057,614	-		MPMX26_01997	0.51	-1.9
2,057,638	-		MPMX26_01997	0.52	-1.3
2,057,719	-		MPMX26_01997	0.58	-1.6
2,057,719	-		MPMX26_01997	0.58	-0.3
2,057,719	-		MPMX26_01997	0.58	-0.7
2,057,719	-		MPMX26_01997	0.58	-0.4
2,057,719	-		MPMX26_01997	0.58	+0.9
2,057,719	-		MPMX26_01997	0.58	-1.0
2,057,719	-		MPMX26_01997	0.58	-0.4
2,057,719	-		MPMX26_01997	0.58	+0.1
2,057,719	-		MPMX26_01997	0.58	+0.9
2,057,719	-		MPMX26_01997	0.58	-0.7