Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01447

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01447 and MPMX26_01448 are separated by 182 nucleotides MPMX26_01447: MPMX26_01447 - hypothetical protein, at 1,499,593 to 1,500,069 _01447 MPMX26_01448: MPMX26_01448 - hypothetical protein, at 1,500,252 to 1,500,608 _01448 Position (kb) 1499 1500 1501Strain fitness (log2 ratio) -1 0 1 2at 1498.818 kb on + strandat 1499.872 kb on + strand, within MPMX26_01447at 1499.890 kb on + strand, within MPMX26_01447at 1499.959 kb on + strand, within MPMX26_01447at 1500.018 kb on + strand, within MPMX26_01447at 1500.018 kb on + strand, within MPMX26_01447at 1500.046 kb on + strandat 1500.046 kb on + strandat 1500.046 kb on + strandat 1500.537 kb on - strand, within MPMX26_01448

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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1,498,818 + +0.0
1,499,872 + MPMX26_01447 0.58 -0.9
1,499,890 + MPMX26_01447 0.62 -0.5
1,499,959 + MPMX26_01447 0.77 +0.9
1,500,018 + MPMX26_01447 0.89 -0.8
1,500,018 + MPMX26_01447 0.89 -1.5
1,500,046 + +0.1
1,500,046 + +1.9
1,500,046 + -1.4
1,500,537 - MPMX26_01448 0.80 +1.0

Or see this region's nucleotide sequence