Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00824

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00823 and MPMX26_00824 are separated by 66 nucleotidesMPMX26_00824 and MPMX26_00825 are separated by 152 nucleotides MPMX26_00823: MPMX26_00823 - hypothetical protein, at 869,562 to 869,810 _00823 MPMX26_00824: MPMX26_00824 - hypothetical protein, at 869,877 to 870,920 _00824 MPMX26_00825: MPMX26_00825 - hypothetical protein, at 871,073 to 872,116 _00825 Position (kb) 869 870 871Strain fitness (log2 ratio) -1 0 1at 869.111 kb on - strandat 869.254 kb on - strandat 869.282 kb on - strandat 869.361 kb on - strandat 869.361 kb on - strandat 869.375 kb on - strandat 869.375 kb on - strandat 870.193 kb on - strand, within MPMX26_00824at 870.856 kb on + strandat 871.744 kb on + strand, within MPMX26_00825at 871.818 kb on + strand, within MPMX26_00825

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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869,111 - -0.4
869,254 - -0.1
869,282 - +1.2
869,361 - +1.1
869,361 - -1.6
869,375 - +1.1
869,375 - -1.7
870,193 - MPMX26_00824 0.30 +0.7
870,856 + -0.9
871,744 + MPMX26_00825 0.64 +0.1
871,818 + MPMX26_00825 0.71 -0.2

Or see this region's nucleotide sequence