Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00663

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00662 and MPMX26_00663 are separated by 39 nucleotidesMPMX26_00663 and MPMX26_00664 are separated by 92 nucleotides MPMX26_00662: MPMX26_00662 - Protein QmcA, at 706,767 to 707,621 _00662 MPMX26_00663: MPMX26_00663 - hypothetical protein, at 707,661 to 708,116 _00663 MPMX26_00664: MPMX26_00664 - hypothetical protein, at 708,209 to 709,168 _00664 Position (kb) 707 708 709Strain fitness (log2 ratio) -2 -1 0 1 2 3at 706.787 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.806 kb on - strandat 706.811 kb on - strandat 706.857 kb on - strand, within MPMX26_00662at 706.927 kb on - strand, within MPMX26_00662at 706.929 kb on - strand, within MPMX26_00662at 706.929 kb on - strand, within MPMX26_00662at 706.929 kb on - strand, within MPMX26_00662at 706.961 kb on - strand, within MPMX26_00662at 706.961 kb on - strand, within MPMX26_00662at 706.977 kb on - strand, within MPMX26_00662at 707.006 kb on - strand, within MPMX26_00662at 707.060 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.075 kb on - strand, within MPMX26_00662at 707.094 kb on - strand, within MPMX26_00662at 707.111 kb on - strand, within MPMX26_00662at 707.121 kb on - strand, within MPMX26_00662at 707.124 kb on - strand, within MPMX26_00662at 707.129 kb on - strand, within MPMX26_00662at 707.163 kb on - strand, within MPMX26_00662at 707.216 kb on - strand, within MPMX26_00662at 707.226 kb on - strand, within MPMX26_00662at 707.243 kb on - strand, within MPMX26_00662at 707.280 kb on - strand, within MPMX26_00662at 707.291 kb on - strand, within MPMX26_00662at 707.321 kb on - strand, within MPMX26_00662at 707.340 kb on - strand, within MPMX26_00662at 707.340 kb on - strand, within MPMX26_00662at 707.355 kb on - strand, within MPMX26_00662at 707.362 kb on - strand, within MPMX26_00662at 707.362 kb on - strand, within MPMX26_00662at 707.367 kb on - strand, within MPMX26_00662at 707.372 kb on - strand, within MPMX26_00662at 707.385 kb on - strand, within MPMX26_00662at 707.396 kb on - strand, within MPMX26_00662at 707.420 kb on - strand, within MPMX26_00662at 707.446 kb on - strand, within MPMX26_00662at 707.465 kb on - strand, within MPMX26_00662at 707.471 kb on - strand, within MPMX26_00662at 707.505 kb on - strand, within MPMX26_00662at 707.510 kb on - strand, within MPMX26_00662at 707.511 kb on - strand, within MPMX26_00662at 707.551 kb on - strandat 707.744 kb on - strand, within MPMX26_00663at 707.759 kb on - strand, within MPMX26_00663at 707.825 kb on - strand, within MPMX26_00663at 707.828 kb on - strand, within MPMX26_00663at 707.853 kb on - strand, within MPMX26_00663at 707.863 kb on - strand, within MPMX26_00663at 707.877 kb on - strand, within MPMX26_00663at 707.921 kb on - strand, within MPMX26_00663at 707.921 kb on - strand, within MPMX26_00663at 707.921 kb on - strand, within MPMX26_00663at 707.921 kb on - strand, within MPMX26_00663at 707.930 kb on - strand, within MPMX26_00663at 707.951 kb on - strand, within MPMX26_00663at 707.969 kb on - strand, within MPMX26_00663at 708.019 kb on - strand, within MPMX26_00663at 708.025 kb on - strand, within MPMX26_00663at 708.066 kb on - strand, within MPMX26_00663at 708.088 kb on - strandat 708.088 kb on - strandat 708.088 kb on - strandat 708.088 kb on - strandat 708.088 kb on - strandat 708.088 kb on - strandat 708.098 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.239 kb on - strandat 708.241 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.296 kb on - strandat 708.374 kb on - strand, within MPMX26_00664at 708.380 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.392 kb on - strand, within MPMX26_00664at 708.393 kb on - strand, within MPMX26_00664at 708.445 kb on - strand, within MPMX26_00664at 708.484 kb on - strand, within MPMX26_00664at 708.527 kb on - strand, within MPMX26_00664at 708.530 kb on - strand, within MPMX26_00664at 708.530 kb on - strand, within MPMX26_00664at 708.530 kb on - strand, within MPMX26_00664at 708.530 kb on - strand, within MPMX26_00664at 708.530 kb on - strand, within MPMX26_00664at 708.560 kb on - strand, within MPMX26_00664at 708.565 kb on - strand, within MPMX26_00664at 708.612 kb on - strand, within MPMX26_00664at 708.637 kb on - strand, within MPMX26_00664at 708.637 kb on - strand, within MPMX26_00664at 708.637 kb on - strand, within MPMX26_00664at 708.637 kb on - strand, within MPMX26_00664at 708.656 kb on - strand, within MPMX26_00664at 708.824 kb on - strand, within MPMX26_00664at 708.883 kb on - strand, within MPMX26_00664at 708.914 kb on - strand, within MPMX26_00664at 709.015 kb on - strand, within MPMX26_00664at 709.046 kb on - strand, within MPMX26_00664at 709.046 kb on - strand, within MPMX26_00664at 709.060 kb on - strand, within MPMX26_00664at 709.070 kb on - strand, within MPMX26_00664at 709.070 kb on - strand, within MPMX26_00664at 709.091 kb on - strandat 709.112 kb on - strandat 709.112 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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706,787 - -0.3
706,806 - -0.6
706,806 - -0.1
706,806 - -0.2
706,806 - +0.1
706,806 - +0.2
706,806 - +0.3
706,806 - -1.9
706,806 - +0.3
706,806 - +0.1
706,806 - -0.2
706,806 - -0.3
706,806 - +0.5
706,806 - -0.3
706,806 - -0.6
706,806 - -0.6
706,811 - -0.1
706,857 - MPMX26_00662 0.11 -0.6
706,927 - MPMX26_00662 0.19 +1.3
706,929 - MPMX26_00662 0.19 -1.2
706,929 - MPMX26_00662 0.19 -1.5
706,929 - MPMX26_00662 0.19 +0.2
706,961 - MPMX26_00662 0.23 +0.6
706,961 - MPMX26_00662 0.23 -0.0
706,977 - MPMX26_00662 0.25 +0.1
707,006 - MPMX26_00662 0.28 -0.3
707,060 - MPMX26_00662 0.34 +0.4
707,075 - MPMX26_00662 0.36 +0.7
707,075 - MPMX26_00662 0.36 -0.2
707,075 - MPMX26_00662 0.36 +0.3
707,075 - MPMX26_00662 0.36 +1.3
707,075 - MPMX26_00662 0.36 +0.6
707,075 - MPMX26_00662 0.36 +0.1
707,075 - MPMX26_00662 0.36 +0.9
707,075 - MPMX26_00662 0.36 -0.0
707,094 - MPMX26_00662 0.38 +0.6
707,111 - MPMX26_00662 0.40 +0.1
707,121 - MPMX26_00662 0.41 -0.4
707,124 - MPMX26_00662 0.42 +0.3
707,129 - MPMX26_00662 0.42 -0.3
707,163 - MPMX26_00662 0.46 -0.1
707,216 - MPMX26_00662 0.53 -0.5
707,226 - MPMX26_00662 0.54 -0.3
707,243 - MPMX26_00662 0.56 -2.2
707,280 - MPMX26_00662 0.60 -0.6
707,291 - MPMX26_00662 0.61 -0.3
707,321 - MPMX26_00662 0.65 +0.2
707,340 - MPMX26_00662 0.67 +0.9
707,340 - MPMX26_00662 0.67 +1.0
707,355 - MPMX26_00662 0.69 -0.3
707,362 - MPMX26_00662 0.70 +0.3
707,362 - MPMX26_00662 0.70 +1.3
707,367 - MPMX26_00662 0.70 -0.2
707,372 - MPMX26_00662 0.71 +0.6
707,385 - MPMX26_00662 0.72 -0.1
707,396 - MPMX26_00662 0.74 -0.3
707,420 - MPMX26_00662 0.76 +0.1
707,446 - MPMX26_00662 0.79 +0.3
707,465 - MPMX26_00662 0.82 -0.4
707,471 - MPMX26_00662 0.82 -0.2
707,505 - MPMX26_00662 0.86 -0.3
707,510 - MPMX26_00662 0.87 +0.9
707,511 - MPMX26_00662 0.87 +0.9
707,551 - -0.9
707,744 - MPMX26_00663 0.18 +0.7
707,759 - MPMX26_00663 0.21 +0.6
707,825 - MPMX26_00663 0.36 -0.6
707,828 - MPMX26_00663 0.37 -1.1
707,853 - MPMX26_00663 0.42 -0.8
707,863 - MPMX26_00663 0.44 +0.6
707,877 - MPMX26_00663 0.47 +0.1
707,921 - MPMX26_00663 0.57 +0.1
707,921 - MPMX26_00663 0.57 +0.7
707,921 - MPMX26_00663 0.57 -0.4
707,921 - MPMX26_00663 0.57 -0.3
707,930 - MPMX26_00663 0.59 -1.2
707,951 - MPMX26_00663 0.64 -0.4
707,969 - MPMX26_00663 0.68 -0.2
708,019 - MPMX26_00663 0.79 +0.9
708,025 - MPMX26_00663 0.80 -0.2
708,066 - MPMX26_00663 0.89 +0.4
708,088 - +0.6
708,088 - +0.0
708,088 - -0.3
708,088 - +0.6
708,088 - -0.4
708,088 - +0.7
708,098 - -0.3
708,239 - +1.9
708,239 - -0.6
708,239 - +0.5
708,239 - -0.3
708,239 - -0.9
708,239 - -0.8
708,239 - +0.3
708,239 - +0.8
708,239 - +0.1
708,241 - +0.1
708,296 - -0.2
708,296 - +0.5
708,296 - -0.2
708,296 - +0.2
708,296 - +0.6
708,296 - -0.0
708,296 - -0.2
708,296 - +0.3
708,296 - +0.5
708,296 - -1.0
708,296 - +0.3
708,374 - MPMX26_00664 0.17 +1.2
708,380 - MPMX26_00664 0.18 +0.5
708,392 - MPMX26_00664 0.19 -0.7
708,392 - MPMX26_00664 0.19 +2.9
708,392 - MPMX26_00664 0.19 +2.1
708,392 - MPMX26_00664 0.19 +0.2
708,392 - MPMX26_00664 0.19 -0.2
708,392 - MPMX26_00664 0.19 -0.2
708,392 - MPMX26_00664 0.19 +0.8
708,392 - MPMX26_00664 0.19 -0.3
708,393 - MPMX26_00664 0.19 -1.8
708,445 - MPMX26_00664 0.25 +0.4
708,484 - MPMX26_00664 0.29 +0.1
708,527 - MPMX26_00664 0.33 +0.2
708,530 - MPMX26_00664 0.33 -0.9
708,530 - MPMX26_00664 0.33 +0.2
708,530 - MPMX26_00664 0.33 +0.8
708,530 - MPMX26_00664 0.33 -0.6
708,530 - MPMX26_00664 0.33 +0.5
708,560 - MPMX26_00664 0.37 -0.3
708,565 - MPMX26_00664 0.37 +0.5
708,612 - MPMX26_00664 0.42 +0.1
708,637 - MPMX26_00664 0.45 -0.2
708,637 - MPMX26_00664 0.45 +0.6
708,637 - MPMX26_00664 0.45 +0.3
708,637 - MPMX26_00664 0.45 -0.7
708,656 - MPMX26_00664 0.47 +0.7
708,824 - MPMX26_00664 0.64 +0.2
708,883 - MPMX26_00664 0.70 -1.0
708,914 - MPMX26_00664 0.73 -0.9
709,015 - MPMX26_00664 0.84 +0.9
709,046 - MPMX26_00664 0.87 +1.0
709,046 - MPMX26_00664 0.87 -0.3
709,060 - MPMX26_00664 0.89 -0.8
709,070 - MPMX26_00664 0.90 +0.0
709,070 - MPMX26_00664 0.90 +0.8
709,091 - -0.1
709,112 - +2.9
709,112 - +0.9

Or see this region's nucleotide sequence