Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00583

Experiment: TSB with Dermcidin 2 ug/mL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00582 and MPMX26_00583 are separated by 124 nucleotidesMPMX26_00583 and MPMX26_00584 are separated by 548 nucleotides MPMX26_00582: MPMX26_00582 - hypothetical protein, at 616,790 to 617,758 _00582 MPMX26_00583: MPMX26_00583 - hypothetical protein, at 617,883 to 618,785 _00583 MPMX26_00584: MPMX26_00584 - 16S ribosomal RNA, at 619,334 to 620,866 _00584 Position (kb) 617 618 619Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 617.979 kb on - strand, within MPMX26_00583at 618.018 kb on - strand, within MPMX26_00583at 618.027 kb on - strand, within MPMX26_00583at 618.035 kb on - strand, within MPMX26_00583at 618.035 kb on - strand, within MPMX26_00583at 618.084 kb on - strand, within MPMX26_00583at 618.084 kb on - strand, within MPMX26_00583at 618.104 kb on - strand, within MPMX26_00583at 618.104 kb on - strand, within MPMX26_00583at 618.104 kb on - strand, within MPMX26_00583at 618.104 kb on - strand, within MPMX26_00583at 618.113 kb on - strand, within MPMX26_00583at 618.152 kb on - strand, within MPMX26_00583at 618.152 kb on - strand, within MPMX26_00583at 618.167 kb on - strand, within MPMX26_00583at 618.167 kb on - strand, within MPMX26_00583at 618.167 kb on - strand, within MPMX26_00583at 618.167 kb on - strand, within MPMX26_00583at 618.169 kb on - strand, within MPMX26_00583at 618.193 kb on - strand, within MPMX26_00583at 618.204 kb on - strand, within MPMX26_00583at 618.204 kb on - strand, within MPMX26_00583at 618.219 kb on - strand, within MPMX26_00583at 618.219 kb on - strand, within MPMX26_00583at 618.219 kb on - strand, within MPMX26_00583at 618.224 kb on - strand, within MPMX26_00583at 618.242 kb on - strand, within MPMX26_00583at 618.242 kb on - strand, within MPMX26_00583at 618.252 kb on - strand, within MPMX26_00583at 618.260 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.275 kb on - strand, within MPMX26_00583at 618.281 kb on - strand, within MPMX26_00583at 618.288 kb on - strand, within MPMX26_00583at 618.323 kb on - strand, within MPMX26_00583at 618.362 kb on - strand, within MPMX26_00583at 618.362 kb on - strand, within MPMX26_00583at 618.362 kb on - strand, within MPMX26_00583at 618.362 kb on - strand, within MPMX26_00583at 618.371 kb on - strand, within MPMX26_00583at 618.371 kb on - strand, within MPMX26_00583at 618.381 kb on - strand, within MPMX26_00583at 618.385 kb on - strand, within MPMX26_00583at 618.395 kb on - strand, within MPMX26_00583at 618.395 kb on - strand, within MPMX26_00583at 618.395 kb on - strand, within MPMX26_00583at 618.395 kb on - strand, within MPMX26_00583at 618.395 kb on - strand, within MPMX26_00583at 618.435 kb on - strand, within MPMX26_00583at 618.435 kb on - strand, within MPMX26_00583at 618.435 kb on - strand, within MPMX26_00583at 618.445 kb on - strand, within MPMX26_00583at 618.445 kb on - strand, within MPMX26_00583at 618.467 kb on - strand, within MPMX26_00583at 618.483 kb on - strand, within MPMX26_00583at 618.483 kb on - strand, within MPMX26_00583at 618.487 kb on - strand, within MPMX26_00583at 618.487 kb on - strand, within MPMX26_00583at 618.524 kb on - strand, within MPMX26_00583at 618.533 kb on - strand, within MPMX26_00583at 618.533 kb on - strand, within MPMX26_00583at 618.561 kb on - strand, within MPMX26_00583at 618.562 kb on - strand, within MPMX26_00583at 618.571 kb on - strand, within MPMX26_00583at 618.576 kb on - strand, within MPMX26_00583at 618.612 kb on - strand, within MPMX26_00583at 618.612 kb on - strand, within MPMX26_00583at 618.612 kb on - strand, within MPMX26_00583at 618.612 kb on - strand, within MPMX26_00583at 618.622 kb on - strand, within MPMX26_00583at 618.645 kb on - strand, within MPMX26_00583at 618.645 kb on - strand, within MPMX26_00583at 618.645 kb on - strand, within MPMX26_00583at 618.678 kb on - strand, within MPMX26_00583at 618.681 kb on - strand, within MPMX26_00583at 618.701 kb on - strandat 618.702 kb on - strandat 618.715 kb on - strandat 618.715 kb on - strandat 618.820 kb on - strandat 618.850 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB with Dermcidin 2 ug/mL
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617,979 - MPMX26_00583 0.11 -2.2
618,018 - MPMX26_00583 0.15 -0.4
618,027 - MPMX26_00583 0.16 -1.3
618,035 - MPMX26_00583 0.17 -1.2
618,035 - MPMX26_00583 0.17 -1.6
618,084 - MPMX26_00583 0.22 -0.5
618,084 - MPMX26_00583 0.22 -0.4
618,104 - MPMX26_00583 0.24 -1.8
618,104 - MPMX26_00583 0.24 -0.8
618,104 - MPMX26_00583 0.24 -1.4
618,104 - MPMX26_00583 0.24 -1.0
618,113 - MPMX26_00583 0.25 -1.1
618,152 - MPMX26_00583 0.30 -1.6
618,152 - MPMX26_00583 0.30 -1.7
618,167 - MPMX26_00583 0.31 -2.9
618,167 - MPMX26_00583 0.31 -2.0
618,167 - MPMX26_00583 0.31 +0.0
618,167 - MPMX26_00583 0.31 -0.7
618,169 - MPMX26_00583 0.32 -1.2
618,193 - MPMX26_00583 0.34 +0.8
618,204 - MPMX26_00583 0.36 -2.0
618,204 - MPMX26_00583 0.36 -2.4
618,219 - MPMX26_00583 0.37 -1.7
618,219 - MPMX26_00583 0.37 -1.8
618,219 - MPMX26_00583 0.37 -1.2
618,224 - MPMX26_00583 0.38 -0.8
618,242 - MPMX26_00583 0.40 -2.4
618,242 - MPMX26_00583 0.40 -1.3
618,252 - MPMX26_00583 0.41 -1.9
618,260 - MPMX26_00583 0.42 -1.8
618,275 - MPMX26_00583 0.43 -2.2
618,275 - MPMX26_00583 0.43 +0.2
618,275 - MPMX26_00583 0.43 -0.2
618,275 - MPMX26_00583 0.43 -2.0
618,275 - MPMX26_00583 0.43 -2.2
618,275 - MPMX26_00583 0.43 -1.0
618,275 - MPMX26_00583 0.43 -3.6
618,275 - MPMX26_00583 0.43 -2.6
618,275 - MPMX26_00583 0.43 -0.5
618,275 - MPMX26_00583 0.43 -1.0
618,275 - MPMX26_00583 0.43 -0.6
618,275 - MPMX26_00583 0.43 -1.8
618,281 - MPMX26_00583 0.44 -0.0
618,288 - MPMX26_00583 0.45 +0.5
618,323 - MPMX26_00583 0.49 -1.1
618,362 - MPMX26_00583 0.53 -2.2
618,362 - MPMX26_00583 0.53 -1.0
618,362 - MPMX26_00583 0.53 -1.6
618,362 - MPMX26_00583 0.53 -0.8
618,371 - MPMX26_00583 0.54 -2.2
618,371 - MPMX26_00583 0.54 -2.2
618,381 - MPMX26_00583 0.55 -0.4
618,385 - MPMX26_00583 0.56 -1.1
618,395 - MPMX26_00583 0.57 -3.2
618,395 - MPMX26_00583 0.57 -2.0
618,395 - MPMX26_00583 0.57 -2.6
618,395 - MPMX26_00583 0.57 -0.6
618,395 - MPMX26_00583 0.57 -2.6
618,435 - MPMX26_00583 0.61 -0.9
618,435 - MPMX26_00583 0.61 -1.1
618,435 - MPMX26_00583 0.61 -1.4
618,445 - MPMX26_00583 0.62 -2.0
618,445 - MPMX26_00583 0.62 -1.4
618,467 - MPMX26_00583 0.65 -0.6
618,483 - MPMX26_00583 0.66 -1.9
618,483 - MPMX26_00583 0.66 -0.7
618,487 - MPMX26_00583 0.67 -0.0
618,487 - MPMX26_00583 0.67 +0.4
618,524 - MPMX26_00583 0.71 +0.5
618,533 - MPMX26_00583 0.72 -0.4
618,533 - MPMX26_00583 0.72 +0.1
618,561 - MPMX26_00583 0.75 -2.4
618,562 - MPMX26_00583 0.75 +1.4
618,571 - MPMX26_00583 0.76 +1.4
618,576 - MPMX26_00583 0.77 -0.9
618,612 - MPMX26_00583 0.81 -1.0
618,612 - MPMX26_00583 0.81 +0.2
618,612 - MPMX26_00583 0.81 -3.2
618,612 - MPMX26_00583 0.81 -2.2
618,622 - MPMX26_00583 0.82 +0.6
618,645 - MPMX26_00583 0.84 -1.6
618,645 - MPMX26_00583 0.84 -2.0
618,645 - MPMX26_00583 0.84 -0.5
618,678 - MPMX26_00583 0.88 -1.1
618,681 - MPMX26_00583 0.88 -1.8
618,701 - -1.3
618,702 - -2.5
618,715 - +2.0
618,715 - -0.4
618,820 - -0.6
618,850 - -0.0

Or see this region's nucleotide sequence